Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco08g0089 ATGTTGCTGAAGCTTCAGACGAGCACACAGTCAAGTTGTGGCCATCTGGTGTTTCAGAAGCCATGGATAAATCTGCAGAGTGGCAGGAGTCCACTACTTCTGGCTGTGGGACGCTCAATCCCAAACCAAAAGAAGCACAAGAGGGTTGGGGTTAGGTGCAGCACTGGCGGCAACGACGCCAAAGCGGGGACCGCCGCCGCCGTGAGCGAAGCAGGAAGAGAAAAGACGACGACCAAGGTTAAAGTCACTCTAACAGTTCTGAAAACTGTTGAAGGCTATTTCTCAGATATCAGTATCCAGCGAGGGCTCGATGATATCAAGGAGCTGTTCGGTAAATCTCTTAAAGTGGAGCTACTTAGTGCCCAGCTTGAACCCAAGACGGGAGCGGAGAAGGAGGCGATACAAGGATTCGTGCACAGAACCGGAGAAGAGGATCAAGAGGTGAAGTACGAGGCGGAGGTAGAGGTGGGAAGTGAGTTCGGAGAGATAGGGGCGTTGTCGGTGGAGAATGAGCACCACAAGGAGTTGTTCGTCAAGGACGTGGTCCTGCATGGCTTTGATGGCGGTCCCCTACGCTTTTCCTGCAACTCCTGGGTTCACTCCAAGAACGACAACCCCATCAACAGAGTCTTCTTCCCTAACAAGGCGTACTTGCCGTCGGAGACGCCGGCGGGGATAAAGAGGATCAGGGAGGAGGAGTTGAAGTTGGTGAGGGGGAACGGCGTCGGAGAGAGGAAGACCTATGAGAGAGTGTACGACTACGACGTGTACAATGACCTTGGAAATCCCGACAGCGACGAGAACCTCAAGAGGCCAGTTCTCGGCGGCCAAGACCGTCCTTACCCCAGGCGGTGTCGAACCGGCCGTCCCCGCTGTAAGAAAGATCCATTATCAGAGGAAAGAAGCAGCAGTGTGTATGTGCCGAGAGATGAAGCCTTCTCAGATGTGAAGCAGCTGACATTTTCTACCAATGCTGTGTCTTCTGTGTTGCATGCCCTCGTCCCTGCCCTCCAGACCTCCCTCGTTGACAGCTCTCTTGGCTTCCCCTTGTTCTCTTCCATTGACTCTCTCTTCAACGAAGGAGTTAACTTGCCTCCTCTTAAAAGCAAGAGCTTCCTCAGGACCCTTTTGCCTCGCCTCGTCAAGTTCATCAATGACGCCGAGCAAGACATTCTCCGTTTTGAGACTCCCGCTACTATGGACCGAGACAGGTTCTTTTGGTTTAGGGACGAGGAATTCGCTAGGCAAACTCTTGCAGGTCTCAACCCTTGCAGCATCCAATTGGTTACGGAGTGGCCATTGAAAAGTTCATTAGATCCCAAGATCTATGGCCCTCAAGAATCAGCCATAACCACCGAAATCATTGAGAGAGAAATCAGAGGTTTTGTCACCATTCAGGAGGCCATAAAACAGAAGAAGTTGTTCATCCTGGACTACCATGATCTGTTGCTACCCTATGTGGAGAAGGTTAGGGGGCTTGGAGGGACAACTCTATATGGCTCAAGGACGTTGTTCTTCCTCACCCCAGATGACACGTTAAGGCCTCTGGCCATCGAGCTGACTCGGCCTACTATAGGGGACAAGCCCCATTGGAGACAAGTTTTCACACCCACCTGGCACTCAACCGGTATTTGGCTCTGGAGGCTGGCCAAAGCCCATGTCCTTGCCCATGACTCCGGCTACCACCAACTCGTCAGCCATTGGCTCCGCACCCATTGTTGTACGGAACCATATATCATTGCAACAAACAGGCAGCTCAGTGTTATGCACCCGATCTATAGGCTTCTGCATCCCCACTTCAGATACACAATGGAGATAAACGCTCTGGCTCGTCAGGCACTCATTAACGCAGGTGGAGTAATAGAGAGTAACTTCTCGCCTGGCAAATACTCCATCGAACTCAGCTCCGTCGCCTACGACAAGCAGTGGCAGTTCAATTTACAGGCCCTACCCGCCGATCTCATCAACAGGGGATTGGCGGTGGAGGACCCCACTGCTCCCCACGGCTTAAAGCTCACCATCGAGGATTACCCTTATGCCACCGACGGTCTCGTTCTTTGGGACGCCATCAAACAGTGGGTCACCGACTATGTTAATCGTTACTACCCGGACCCGAGTTTGGTGGAGTCGGATCCAGAGCTCCAGGCCTGGTGGGAAGAGATACGAACCAAAGGGCATGCGGATAAAAAGGACGAGCACTGGTGGCCGGTTCTAAAAACGCCTAAGGATCTCGTGGAGATCGTGACCACTATTGTTTGGATAACGTCGGGTCACCACGCGGCGGTTAATTTCGGGCAGTACACATATGCCGGGTATTTCCCGAACCGGCCCACCACTGCGAGAACTAATGTGCCCACGGAGGACTCGTCCGCGACGGAATGGGAACTTTTCATGAACAAACCGGAACTTGCACTGTTGAGGTGCTTCCCTTCGCAGGTTCAGGCGACAACGGTGATGGCGGTGCTGGACATTCTTTCGAGTCACTCGCCGGACGAAGAGTATCTGGGGAGCCATATAGAGCCGTCGTGGCAGGAGGATCCGGTGGTGAAAGCAGCGTTCGAGCAGTTTCAAGGGCGGTTGAAAGAGCTGGAGGGGTTGGTCGATTTGAGGAACGCGGATCAAAATCTGAAGAACCGAACCGGCGCTGGTGTTGTGCCGTATGAGCTTTTGAAGCCCTTCTCTGAGGAGCCTGGAGTCACCGGGAAGGGAGTTCCGTACAGTATCTCCATTTGA 2733 0.5306 MLLKLQTSTQSSCGHLVFQKPWINLQSGRSPLLLAVGRSIPNQKKHKRVGVRCSTGGNDAKAGTAAAVSEAGREKTTTKVKVTLTVLKTVEGYFSDISIQRGLDDIKELFGKSLKVELLSAQLEPKTGAEKEAIQGFVHRTGEEDQEVKYEAEVEVGSEFGEIGALSVENEHHKELFVKDVVLHGFDGGPLRFSCNSWVHSKNDNPINRVFFPNKAYLPSETPAGIKRIREEELKLVRGNGVGERKTYERVYDYDVYNDLGNPDSDENLKRPVLGGQDRPYPRRCRTGRPRCKKDPLSEERSSSVYVPRDEAFSDVKQLTFSTNAVSSVLHALVPALQTSLVDSSLGFPLFSSIDSLFNEGVNLPPLKSKSFLRTLLPRLVKFINDAEQDILRFETPATMDRDRFFWFRDEEFARQTLAGLNPCSIQLVTEWPLKSSLDPKIYGPQESAITTEIIEREIRGFVTIQEAIKQKKLFILDYHDLLLPYVEKVRGLGGTTLYGSRTLFFLTPDDTLRPLAIELTRPTIGDKPHWRQVFTPTWHSTGIWLWRLAKAHVLAHDSGYHQLVSHWLRTHCCTEPYIIATNRQLSVMHPIYRLLHPHFRYTMEINALARQALINAGGVIESNFSPGKYSIELSSVAYDKQWQFNLQALPADLINRGLAVEDPTAPHGLKLTIEDYPYATDGLVLWDAIKQWVTDYVNRYYPDPSLVESDPELQAWWEEIRTKGHADKKDEHWWPVLKTPKDLVEIVTTIVWITSGHHAAVNFGQYTYAGYFPNRPTTARTNVPTEDSSATEWELFMNKPELALLRCFPSQVQATTVMAVLDILSSHSPDEEYLGSHIEPSWQEDPVVKAAFEQFQGRLKELEGLVDLRNADQNLKNRTGAGVVPYELLKPFSEEPGVTGKGVPYSISI 910
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco08g0089 910 MobiDBLite consensus disorder prediction 263 302 - -
Acco08g0089 910 Gene3D PLAT/LH2 domain 79 235 - -
Acco08g0089 910 Pfam Lipoxygenase 226 892 IPR013819 GO:0016702|GO:0046872
Acco08g0089 910 PRINTS Lipoxygenase signature 544 561 IPR013819 GO:0016702|GO:0046872
Acco08g0089 910 PRINTS Lipoxygenase signature 562 579 IPR013819 GO:0016702|GO:0046872
Acco08g0089 910 PRINTS Lipoxygenase signature 582 602 IPR013819 GO:0016702|GO:0046872
Acco08g0089 910 SMART LH2_4 78 214 IPR001024 GO:0005515
Acco08g0089 910 ProSitePatterns Lipoxygenases iron-binding region signature 2. 589 599 IPR020834 GO:0016702|GO:0046872
Acco08g0089 910 FunFam Lipoxygenase 424 558 - -
Acco08g0089 910 PRINTS Plant lipoxygenase signature 280 299 IPR001246 GO:0016491
Acco08g0089 910 PRINTS Plant lipoxygenase signature 209 230 IPR001246 GO:0016491
Acco08g0089 910 PRINTS Plant lipoxygenase signature 392 408 IPR001246 GO:0016491
Acco08g0089 910 PRINTS Plant lipoxygenase signature 345 366 IPR001246 GO:0016491
Acco08g0089 910 PRINTS Plant lipoxygenase signature 431 450 IPR001246 GO:0016491
Acco08g0089 910 PRINTS Plant lipoxygenase signature 248 264 IPR001246 GO:0016491
Acco08g0089 910 PRINTS Plant lipoxygenase signature 822 836 IPR001246 GO:0016491
Acco08g0089 910 PRINTS Plant lipoxygenase signature 183 201 IPR001246 GO:0016491
Acco08g0089 910 PRINTS Plant lipoxygenase signature 499 523 IPR001246 GO:0016491
Acco08g0089 910 ProSitePatterns Lipoxygenases iron-binding region signature 1. 562 576 IPR020833 GO:0016702|GO:0046872
Acco08g0089 910 Gene3D - 559 908 - -
Acco08g0089 910 ProSiteProfiles PLAT domain profile. 93 213 IPR001024 GO:0005515
Acco08g0089 910 SUPERFAMILY Lipoxigenase 218 910 IPR036226 -
Acco08g0089 910 SUPERFAMILY Lipase/lipooxygenase domain (PLAT/LH2 domain) 79 217 IPR036392 GO:0005515
Acco08g0089 910 Gene3D - 336 423 IPR027433 -
Acco08g0089 910 ProSiteProfiles Lipoxygenase iron-binding catalytic domain profile. 216 910 IPR013819 GO:0016702|GO:0046872
Acco08g0089 910 Gene3D - 424 558 - -
Acco08g0089 910 FunFam Lipoxygenase 541 909 - -
Acco08g0089 910 PANTHER LIPOXYGENASE 78 910 IPR000907 GO:0016702|GO:0034440|GO:0046872
Acco08g0089 910 CDD PLAT_LH2 101 214 IPR042057 -
Acco08g0089 910 Pfam PLAT/LH2 domain 137 212 IPR001024 GO:0005515
Acco08g0089 910 Gene3D - 236 334 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco08g0089 Acco-ChrAcco08 612468 617961 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco08g0089 159 910 Acyl Lipid Metabolism Gene Families AT3G45140 60.317 0.0 963
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco08g0089 08 612468 617961 Acco08g0089 08 612468 617961 ECH