Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco07g1331 ATGACGACCATGGAGAGCTTGATTGGTTTGGTGAACCGTATCCAGAGGGCTTGTACTGTCCTCGGTGACTATGGAGGTGGTGAAGACACGTTCTCTTCTCTCTGGGAAGCTCTTCCTACCGTTGCTGTGGTCGGCGGTCAGAGTTCCGGGAAGTCTTCCGTTTTGGAGAGTATTGTTGGTCGTGACTTCCTTCCCAGAGGCTCAGGGATTGTGACAAGACGTCCTCTGGTGCTGCAGCTTCATAAGACGGAGGAAGGATCGCAAGAATATGCCGAATTCCTTCACTTGCCAAGGAGAAAGTTCTCTGACTTCTCCCTGGTTCGCCAGGAAATTCAGGATGAAACTGACAGAGTCACTGGAAAGAACAAACAAATATCTCCTATTCCAATTCATCTGAGCATCTATTCTCCAAATGTTGTCAACCTAACATTGATTGATTTACCGGGTTTGACCAAAGTTGCTATAGAAGGACAGCCTGAGAGTGTTGTTCAAGACATTGAAATGATGGTTAGATCTTATGTTGAGAAGCCTAATTGCATTATACTAGCAATATCTCCAGCCAATCAAGACATAGCAACTTCTGATGCTATTAAACTTTCCAGGGATGTGGATCCTACAGGTGAACGGACATTTGGGGTGTTGACGAAGTTGGATTTGATGGATAAAGGAACAAATGCATTGGATGTCCTAGAAGGAAGATCTTATCGCTTGCAACATCCTTGGGTTGGTATTGTGAATCGATCCCAAGCAGATATCAATAAAAATGTTGATATGATTGCTGCTAGACGCAAGGAACGTGAATACTTTGCCACCAGTCCTGACTATGGTCATTTAAGCAGTAAAATGGGTTCAGAGTACCTTGCAAAACTTCTATCACAGCACTTGGAGTCAGTAATCAGGGCCCGGATACCTAGTATAACATCTTTGATTAACAAAAGCATTGATGAACTGGAATCAGAGATGGATCACCTTGGGAGACCTATTGCACTTGATGCTGGGGCTCAATTATACACCATACTGGAACTTTGTCGAGCATTTGATCGGATATTCAAGGAGCATTTAGATGGCGGGCGACCAGGAGGCGATAGGATATATAATGTCTTTGACAATCAGCTTCCTGCTGCTTTACGGAAGCTCCCATTTGATCGGCATCTTTCTATTCAGAATGTAAGGAGAGTGGTATCAGAGGCTGATGGTTATCAGCCTCACTTAATTGCCCCAGAGCAAGGTTATCGGCGCTTGATTGAGGGGTCTCTCAATTACTTTAGAGGCCCAGCTGAAGCTTCAGTTGATGCTGTTCACTTTGTCTTGAAAGAACTTGTGAGAAAATCAATAGCTGAAACTCAGGAACTGAAGCGTTTTCCATCTGTTCAAGCTGAAATAGCTGCAGCAGCAAATGAGGCTTTAGAAAGATTCCGTGAAGAGAGTAAGAAGTGTACTATACGGCTTGTTGACATGGAAGCTTCTTACCTGACTGTAGATTTCTTTCGGAAACTTCCACAAGAAATTGAGAAAACTGGAAATGTCAATACCGCTGCTGCTGCTCCTCCTCCTGCTGCATCAACTGTGGATCGTTATTCAGAGGGCCACTTCAGGAGGATTGCATCAAACGTGTCATCCTACATAGGTTTGGTGGCAGATACCCTCAGGAACACCATTCCGAAGGCTGTTGTTTATTGTCAGGTCAGAGAAGCAAAACATTCTCTGCTAAACCATTTCTACATACAAATAGGGAAGAAGGAGGGTAAGCAGCTATCACAATTATTAGACGAAGACCCTGCATTAATGGAGAGGAGAATGCAATGTGCCAAAAGGCTTGAACTGTACAAAGCAGCGAGGGATGAAATTGATTCTGTCTCATGGGCACGCTAA 1872 0.4418 MTTMESLIGLVNRIQRACTVLGDYGGGEDTFSSLWEALPTVAVVGGQSSGKSSVLESIVGRDFLPRGSGIVTRRPLVLQLHKTEEGSQEYAEFLHLPRRKFSDFSLVRQEIQDETDRVTGKNKQISPIPIHLSIYSPNVVNLTLIDLPGLTKVAIEGQPESVVQDIEMMVRSYVEKPNCIILAISPANQDIATSDAIKLSRDVDPTGERTFGVLTKLDLMDKGTNALDVLEGRSYRLQHPWVGIVNRSQADINKNVDMIAARRKEREYFATSPDYGHLSSKMGSEYLAKLLSQHLESVIRARIPSITSLINKSIDELESEMDHLGRPIALDAGAQLYTILELCRAFDRIFKEHLDGGRPGGDRIYNVFDNQLPAALRKLPFDRHLSIQNVRRVVSEADGYQPHLIAPEQGYRRLIEGSLNYFRGPAEASVDAVHFVLKELVRKSIAETQELKRFPSVQAEIAAAANEALERFREESKKCTIRLVDMEASYLTVDFFRKLPQEIEKTGNVNTAAAAPPPAASTVDRYSEGHFRRIASNVSSYIGLVADTLRNTIPKAVVYCQVREAKHSLLNHFYIQIGKKEGKQLSQLLDEDPALMERRMQCAKRLELYKAARDEIDSVSWAR 623
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco07g1331 623 SMART dynamin_3 4 255 IPR001401 GO:0003924|GO:0005525
Acco07g1331 623 Pfam Dynamin GTPase effector domain 527 619 IPR003130 GO:0003924|GO:0005525
Acco07g1331 623 ProSiteProfiles GED domain profile. 531 623 IPR020850 -
Acco07g1331 623 Gene3D Dynamin, middle domain 337 599 - -
Acco07g1331 623 PANTHER DYNAMIN 5 619 IPR022812 -
Acco07g1331 623 Pfam Dynamin central region 225 492 IPR000375 -
Acco07g1331 623 SMART GED_2 526 619 IPR003130 GO:0003924|GO:0005525
Acco07g1331 623 ProSiteProfiles Dynamin-type guanine nucleotide-binding (G) domain profile. 35 304 IPR030381 GO:0005525
Acco07g1331 623 ProSitePatterns Dynamin-type guanine nucleotide-binding (G) domain signature. 64 73 IPR019762 -
Acco07g1331 623 PRINTS Dynamin signature 38 56 IPR022812 -
Acco07g1331 623 PRINTS Dynamin signature 205 221 IPR022812 -
Acco07g1331 623 PRINTS Dynamin signature 186 204 IPR022812 -
Acco07g1331 623 PRINTS Dynamin signature 228 247 IPR022812 -
Acco07g1331 623 PRINTS Dynamin signature 63 80 IPR022812 -
Acco07g1331 623 PRINTS Dynamin signature 136 153 IPR022812 -
Acco07g1331 623 FunFam Dynamin-related protein 1C 335 599 - -
Acco07g1331 623 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 29 312 IPR027417 -
Acco07g1331 623 CDD DLP_1 38 304 IPR001401 GO:0003924|GO:0005525
Acco07g1331 623 FunFam dynamin-related protein 1E 4 313 - -
Acco07g1331 623 Gene3D - 4 313 IPR027417 -
Acco07g1331 623 Pfam Dynamin family 41 216 IPR045063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco07g1331 Acco-ChrAcco07 24469167 24477727 Dispersed/Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco07g1331 07 24469167 24477727 Acco07g1331 07 24469167 24477727 ECH