Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco07g1060 ATGGGTTTGATTTCTGGGCTCTTTTTGGGGATAGCACTCGGCATCGCTTTGATGTATGGATGGCAATATATGATGAAGTACCGAAGTGCCAAGCGGATTGCGAAGGCTGTTGATATCAAACTCCTTGGATCCCTTGACAGAGATGATATTAGAAAAATCTGTGGTGATAATTCTCCTGAGTGGATATCTTTTCCTGTATATGAACAGGTGAAATGGCTAAACAAGCAGCTGAGCAAACTGTGGCCATCTGTGGCAGAAGCTGGATCAATGGTGATCAAAGAATCTGTTGAACCACTACTTGAAGAGTACAGACCTCCTGGAATTACATCATTGAAATTCAGCAAGCTGTCGCTCGGAAATGTTGCTCCAAAGATTGAAGGTATTCGTGTTCAGAGTCTTAAGAAAGGCCAAATCATAATGGACATTGATTTCCGATGGGGTGGTGATCCCAGCATTATTTTGGCTGTTGAAGCGGCGCTTGTTGCTTCAATCCCCATTCAGTTGAAAGATCTCCAAGTTTTCACGATTATCCGTGTTATCTTCCAACTTGCTGAAGAGATACCCTGTATTTCCGCTGTTGTTGTTGCCCTGCTTGCTGAGCCAAAACCTCGGATTGATTACACTCTTAAAGCCGTTGGAGGAAGTTTGACAGCTATTCCTGGATTATCAGATATGATTGATGACACTGTAGAGTCAATAGTTACCGATATGCTTCAATGGCCTCATAGGATCGTTGTTCCACTTGGTGGTGTACCTGTTGATACCAGTGAACTGGAGCTTAAACCTCAGGGAAATCTCAGACTGAGTGTTCTGAAAGCCAATGGTTTGAAGAATATGGAAATGATTGGGAAGTCTGATCCATATGTAGTTGTGCATATTCGACCTTTATTTAAGGTTAAAACCAAGGTTATTGACAACAACCTGAATCCTGTTTGGGATGAGACGTTCAACTTGATTGTCGAAGACAAGGAGACTCAGTCAGTCATTCTAGAGGTTTTTGATGAAGATATTGGGCAAGATAAGAGATTGGGAATAGTAAAATTACCCCTCATTGATCTCGAGTCAGAAACTGAAAAGGAAATTGAGTTGAGGTTGCTGCCTTCCCTGGACACACTTAAAGTAAAAGATAAGAAAGACCGAGGATCATTGACAATTCAGGTCTTATACCATCAATATAATAAAGAAGAGCAGTTGGTGGCTCTAGAAGCAGAGAAGAAGATACTTGAAGAAAGGAAGAAGCTGAAAGAGGAAGGAGTTATAGGAAGCACCATGGATGCTATAGACGGAGCAGCATCGCTTGTTGGTTCTGGTGTAGGACTGGTTGGTACCGGTGTTCTTACTGGTGCTGGCCTTGTTGGAAGTGGTGTTGGTGCTGGGGTGGGGCTTGTAGGTAGCGGTCTTGGAGCTGTTGGGAGCGGATTGAGCAGGGCCGGTAAGTTCATGGGCCGGACTATCACGGGAGGACATAGCAGTGCGAGGAGGAGTGGTGCAACTACTCCAGTCAATAATGCTCAGGAAAATGGCGGCGGTGCAAAGCCCCTGTGA 1545 0.4427 MGLISGLFLGIALGIALMYGWQYMMKYRSAKRIAKAVDIKLLGSLDRDDIRKICGDNSPEWISFPVYEQVKWLNKQLSKLWPSVAEAGSMVIKESVEPLLEEYRPPGITSLKFSKLSLGNVAPKIEGIRVQSLKKGQIIMDIDFRWGGDPSIILAVEAALVASIPIQLKDLQVFTIIRVIFQLAEEIPCISAVVVALLAEPKPRIDYTLKAVGGSLTAIPGLSDMIDDTVESIVTDMLQWPHRIVVPLGGVPVDTSELELKPQGNLRLSVLKANGLKNMEMIGKSDPYVVVHIRPLFKVKTKVIDNNLNPVWDETFNLIVEDKETQSVILEVFDEDIGQDKRLGIVKLPLIDLESETEKEIELRLLPSLDTLKVKDKKDRGSLTIQVLYHQYNKEEQLVALEAEKKILEERKKLKEEGVIGSTMDAIDGAASLVGSGVGLVGTGVLTGAGLVGSGVGAGVGLVGSGLGAVGSGLSRAGKFMGRTITGGHSSARRSGATTPVNNAQENGGGAKPL 514
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco07g1060 514 Pfam C2 domain 264 360 IPR000008 -
Acco07g1060 514 CDD SMP_SYT 59 248 - -
Acco07g1060 514 ProSiteProfiles C2 domain profile. 247 365 IPR000008 -
Acco07g1060 514 ProSiteProfiles Synaptotagmin-like mitochondrial lipid-binding proteins (SMP) domain profile. 66 249 IPR031468 GO:0008289
Acco07g1060 514 Pfam Synaptotagmin-like mitochondrial-lipid-binding domain 68 248 IPR039010 -
Acco07g1060 514 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 262 391 IPR035892 -
Acco07g1060 514 PANTHER EXTENDED SYNAPTOTAGMIN-RELATED 1 435 IPR045050 GO:0008289
Acco07g1060 514 MobiDBLite consensus disorder prediction 486 514 - -
Acco07g1060 514 FunFam synaptotagmin-4 isoform X1 259 417 - -
Acco07g1060 514 PRINTS C2 domain signature 306 319 IPR000008 -
Acco07g1060 514 PRINTS C2 domain signature 328 336 IPR000008 -
Acco07g1060 514 PRINTS C2 domain signature 281 293 IPR000008 -
Acco07g1060 514 Coils Coil 391 418 - -
Acco07g1060 514 MobiDBLite consensus disorder prediction 488 506 - -
Acco07g1060 514 SMART C2_3c 265 362 IPR000008 -
Acco07g1060 514 CDD C2 266 360 - -
Acco07g1060 514 Gene3D C2 domain 259 418 IPR035892 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco07g1060 Acco-ChrAcco07 15285223 15299715 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco07g1060 249 350 Lipid Metabolism Gene Families AT3G61300 30.097 6.20e-08 53.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco07g1060 07 15285223 15299715 Acco07g1060 07 15285223 15299715 ECH