Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco07g0663 ATGATTCTGTCCAAGCAGGCTTTATCCCTTCAAATTGAGAATGAATTTGTTCAGAACTCAGAGAGAGTGAAGTCTGTTGATCTGCATCCAACTGAACCATGGATTCTAGTGGGTTTGTATTCAGGGACCATTTCCATTTGGAACTACCATACCAAGACTGAAGAAAAGTCTTTCAAGATCAGTGAATCACCAGTGAGATCAGCCAAGTTCATAGCTCGTGAAAACTGGATTGTCGCTGCAAGCGACGATAAATTTATCCGCGTCTACGATTACCAAAACACAGAGAAGGTGACAGAGTTTGAGGCTCATAAAGATTACATAAGGAGTTTGGTTATACATCCTACCTTTCCATATGTGATATCAGCTTCTGACGATCAAGTTCTTAAGGTTTGGGATTGGACCAATGGTTGGTCGAGTATTCAGAACTTTGAAGGTCACTCTCATTATGTGATGCAAGTTGCACTAAATCCAAATGACGAATCTTCCTTTGCAACTGCTTCCCTTGATGGCACTCTGAAGATTTGGAATCTAAACTCTTCAACTTCAAACTTGACCTTGGAAGGACACTTGAAAGGGGTGAATTGTGTTGAGTATTTCACAAGCAATGACAAACAATATCTGTTGAGTGGTTCAGATGATTACACTGCTAAGGTTTGGGATTATCAAATTGAAAACGTTGTACAAACATTAGAAGGACATACCAACAATGTTACAGCAATCTGTGCCCATCCTGAGTTTTCTATTATAATCACAGCTTCAGAGGATAATACTGTTAAAATATGGGATTCTGTCACTTTTAGGCTTCAAACCACGTTGAACTTTGGTCTAGAGAGAGTATGGAATATTGGATACAAGAAAGGATCACATCAGCTTGCTTTTGGTTGTGACAAAGGATTCATCATAGTGAAGATTGATTGCTCTTCTCAAAACCTTCGTGCTGCCAAACAAGACTAG 954 0.3941 MILSKQALSLQIENEFVQNSERVKSVDLHPTEPWILVGLYSGTISIWNYHTKTEEKSFKISESPVRSAKFIARENWIVAASDDKFIRVYDYQNTEKVTEFEAHKDYIRSLVIHPTFPYVISASDDQVLKVWDWTNGWSSIQNFEGHSHYVMQVALNPNDESSFATASLDGTLKIWNLNSSTSNLTLEGHLKGVNCVEYFTSNDKQYLLSGSDDYTAKVWDYQIENVVQTLEGHTNNVTAICAHPEFSIIITASEDNTVKIWDSVTFRLQTTLNFGLERVWNIGYKKGSHQLAFGCDKGFIIVKIDCSSQNLRAAKQD 317
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco07g0663 317 ProSiteProfiles Trp-Asp (WD) repeats profile. 100 132 IPR001680 GO:0005515
Acco07g0663 317 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 186 220 - -
Acco07g0663 317 PANTHER COATOMER 11 306 - -
Acco07g0663 317 CDD WD40 22 302 - -
Acco07g0663 317 ProSiteProfiles Trp-Asp (WD) repeats profile. 186 229 IPR001680 GO:0005515
Acco07g0663 317 Pfam WD domain, G-beta repeat 96 132 IPR001680 GO:0005515
Acco07g0663 317 Pfam WD domain, G-beta repeat 63 90 IPR001680 GO:0005515
Acco07g0663 317 Pfam WD domain, G-beta repeat 225 262 IPR001680 GO:0005515
Acco07g0663 317 Pfam WD domain, G-beta repeat 139 176 IPR001680 GO:0005515
Acco07g0663 317 Pfam WD domain, G-beta repeat 185 220 IPR001680 GO:0005515
Acco07g0663 317 Pfam WD domain, G-beta repeat 21 48 IPR001680 GO:0005515
Acco07g0663 317 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 230 262 - -
Acco07g0663 317 PRINTS G protein beta WD-40 repeat signature 163 177 IPR020472 -
Acco07g0663 317 PRINTS G protein beta WD-40 repeat signature 207 221 IPR020472 -
Acco07g0663 317 PRINTS G protein beta WD-40 repeat signature 249 263 IPR020472 -
Acco07g0663 317 Gene3D - 15 305 IPR015943 GO:0005515
Acco07g0663 317 SMART WD40_4 9 48 IPR001680 GO:0005515
Acco07g0663 317 SMART WD40_4 93 132 IPR001680 GO:0005515
Acco07g0663 317 SMART WD40_4 179 220 IPR001680 GO:0005515
Acco07g0663 317 SMART WD40_4 136 176 IPR001680 GO:0005515
Acco07g0663 317 SMART WD40_4 223 262 IPR001680 GO:0005515
Acco07g0663 317 SMART WD40_4 51 90 IPR001680 GO:0005515
Acco07g0663 317 ProSiteProfiles Trp-Asp (WD) repeats profile. 16 57 IPR001680 GO:0005515
Acco07g0663 317 SUPERFAMILY WD40 repeat-like 10 301 IPR036322 GO:0005515
Acco07g0663 317 FunFam Coatomer alpha subunit, putative 16 305 - -
Acco07g0663 317 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 100 132 - -
Acco07g0663 317 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 143 179 - -
Acco07g0663 317 ProSiteProfiles Trp-Asp (WD) repeats profile. 143 185 IPR001680 GO:0005515
Acco07g0663 317 ProSiteProfiles Trp-Asp (WD) repeats profile. 230 262 IPR001680 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco07g0663 Acco-ChrAcco07 7980551 7982712 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco07g0663 77 268 Miscellaneous Gene Families AT5G08390 26.562 3.92e-19 86.3
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco09g1412 09 29697389 29707820 Acco07g0663 07 7980551 7982712 CCT
Acco07g0663 07 7980551 7982712 Acco07g0663 07 7980551 7982712 ECH