Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco07g0628 ATGGATGTCAGTGAAGGAATTAAACGTGACTCGAAATTCCCCGCCTTTCCCTTTAAACCCTACTCCATACAGATCGACTTCATGAACGCCCTCTACCAGTCTCTCGACCAAGGTGGCGTTTCCATGCTCGAAAGTCCCACTGGTACTGGGAAGACTATGAGTCTTATTTGTAGCGCTTTGCAATGGGTGCTTGATAGGAGGCAACAGCAGAAATCAGAAGAAGCAGGGCGAGACTGTGGTAAAAATCAGGAAAATAATGGCGGGGGTTCAGATGATGAACCTGATTGGCTGAGAGACTTTGTTTTGGACAAAGAAAAGCAAGTCCAGTCTGAAATAACAAGCAAGAAGAAGTACGGGTCTAGATTAGGGAAGCCTGATAAGAAGCATAACCGGGAAATTTGTAAAGATTTTCATGTTATAGGCGAAGGTTCTCCTCCTGAAAAGGGGTGTGATAATTCGCATAAGAAAATTGATAAAGTGGATGTGGATGTTATTGATGAGGAGTTCTTGCCTGAGGAATATGAAAGTGAAGATGAAGATCTGGATAATGTAACTTCTAAGAGGAAGGCTTCTAAAAGTGGTTTTACTCCGTCCAGTGAAGAGAATGAATCAGAGGAGGAGGAGGAGGAGGAGGAGGAAAAGAAGTTAAAGGTTTTTTTCTGTAGTCGAACTCATTCACAGCTATCACAGTTCATAAAGGAACTAAGGAAAACAGTCTTTGCTGATGAGATGGACGTTGTTTGTTTAGGCTCCAGGAAAAATCTTTGCATTAACGAAGAAGTACTAAAACTTGGTAACTCCACACGCATAAATGAGCGATGCTTGGAACTCCAGAAAAAAAAGAAAAATGAACCAGCAAAAATTAAGAACTTAGGGGCATGCACAGGAGTACGGAGAACAAAGGCATTGTCTGGTTGCCCAATGCTTAGAAAGCATAGACTACAAAAAGAATTCAGGAATGAGGTATCTCAGGGAGGGGCATTGGACATTGAAGATCTTGCTAACTTGGGGAGAAATTTGGGAACTTGTCCCTATTATGGTTCTAGAAGCATGGTTTTGAGCGCTGATCTTGTGGTTCTACCATATCAGTCTCTTCTGTCAAAATCATCTCGTGAAGCACTTGGTTTGAATTTGAAATCCAATGTTGTCATTATAGATGAAGCTCATAATTTAGCAGATTCACTCATTAGCATGCATGACTCCAGAATTACTTTAGCACAGCTGGAAAATGTGCATTCCCATTTGGAGAGATACTTTGACAGATTCTGTAATCTTCTGGGACCTGGTAACCGGAGATATATTCAAACTATAATGGTCCTCACTCGAGCTTTCCTGAGAGTGCTAAATAATGAGAAGGGTGCAAATCTCATAAATTCTTGCCAAGATATAGAAAAGGCTTTTCAGGAAAGTAGAGCCTCTGAATTTACCATGTCTGTCAATGATTTCATCTTTGAACTAAATGTGGACAATGTCAACTTGATTAAGCTGGTGAAGTATATCAAGGAAAGCAAAATCATGCACAAGGTTTCCAGTTACGGAGAAAAGGTGGCCAACTTGGAGAAGATTTCAGTTATCACTAAACTTGGACAACATTATGAAGATGGAAGCACTCAGTCTGCGTTCCAGTCTTTAGCTGACATGTTGCTATCACTGACAAACAATGACAATGATGGAAGGATAATCATTTCCAAGTCTAGAACAACGGGCCCCAGGAAACAAGGAGGGTATATTAAATATGTTATGCTCAGTGGAGAGAAGATATTTTCTGAGATTGTGGACCAAGCACACGCTGTCCTATTAGTAGGGGGGACTCTACAACCTATTGAAGAAACACGAGAGCGACTCTTTCCGTGGTTACCACAAAACCAGTTGCATTTCTTTTCATGTGGTCATATTGTCCCTCCACAGAATATTATGCCAATTGCAGTTTCCCGTGGTCCTTCTGGCCGATCCTTTGATTTTAGCTACAGCTCAAGGAGCTCACCTGATACTATGCGGGAGCTAGGCCTTCTCCTCTGTAATTTGGTAACCATAGTTCCTGAAGGAATTGTTGTTTTCTTCTCATCTTTTGATTATGAAGCAAAAGTCTATGAAGCCTGGGAATCTTCTGGCATCCTGGATAGAATTACAAAGAGGAAGCGTATATTTAGAGAGCCTAGAAATAATACAGATATTGAATCTGTTCTTAAAGAATATAAAGAAACAGTTTGCCCATCATCAAGTATAAATTCAAACGGATACCCAGCATCGCCGGCCGGTGCGGTCCTCCTAGCTGTTGTTGGTGGAAAGATATCTGAAGGGATTAACTTAAGTGATGGGATGGGGCGGTGCATAATCATGGTTGGACTGCCATATCCTAGTCCATCTGACATTGAGTTGTTGGAGAGGATAAAGCACATTGAAGGTTTTCGAAATTCAAACGCTATTGAAACTACTACTACATTTTCCTCCAGTTATAATGTTTATAGTGGAGATATACAAGGTGGTTTTGAAATCTTAAGAAGTTGCAGTCACAGAGGAAAGGAATATTATGAGAATCTCTGCATGAAAGCCGTAAATCAATCAATAGGTAGAGCAATCCGTCACATTAATGACTATGCAGCAATTTTGTTGGTTGACACGAGGTATGCATCTGACTCCTCAAAGAGGAGTTTTTCTCATCCAGTGAACAAGCTCCCAGAATGGATAAAGGATCGTTTGGTTTCGTCTACCAATAACTATGGTGAAGTCCATAGGTTACTGCATCAGTTTTTTAAGTTGGACAGAAGGGTTTGTCAATAA 2781 0.4081 MDVSEGIKRDSKFPAFPFKPYSIQIDFMNALYQSLDQGGVSMLESPTGTGKTMSLICSALQWVLDRRQQQKSEEAGRDCGKNQENNGGGSDDEPDWLRDFVLDKEKQVQSEITSKKKYGSRLGKPDKKHNREICKDFHVIGEGSPPEKGCDNSHKKIDKVDVDVIDEEFLPEEYESEDEDLDNVTSKRKASKSGFTPSSEENESEEEEEEEEEKKLKVFFCSRTHSQLSQFIKELRKTVFADEMDVVCLGSRKNLCINEEVLKLGNSTRINERCLELQKKKKNEPAKIKNLGACTGVRRTKALSGCPMLRKHRLQKEFRNEVSQGGALDIEDLANLGRNLGTCPYYGSRSMVLSADLVVLPYQSLLSKSSREALGLNLKSNVVIIDEAHNLADSLISMHDSRITLAQLENVHSHLERYFDRFCNLLGPGNRRYIQTIMVLTRAFLRVLNNEKGANLINSCQDIEKAFQESRASEFTMSVNDFIFELNVDNVNLIKLVKYIKESKIMHKVSSYGEKVANLEKISVITKLGQHYEDGSTQSAFQSLADMLLSLTNNDNDGRIIISKSRTTGPRKQGGYIKYVMLSGEKIFSEIVDQAHAVLLVGGTLQPIEETRERLFPWLPQNQLHFFSCGHIVPPQNIMPIAVSRGPSGRSFDFSYSSRSSPDTMRELGLLLCNLVTIVPEGIVVFFSSFDYEAKVYEAWESSGILDRITKRKRIFREPRNNTDIESVLKEYKETVCPSSSINSNGYPASPAGAVLLAVVGGKISEGINLSDGMGRCIIMVGLPYPSPSDIELLERIKHIEGFRNSNAIETTTTFSSSYNVYSGDIQGGFEILRSCSHRGKEYYENLCMKAVNQSIGRAIRHINDYAAILLVDTRYASDSSKRSFSHPVNKLPEWIKDRLVSSTNNYGEVHRLLHQFFKLDRRVCQ 926
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco07g0628 926 SMART deadxpd 12 430 IPR006554 GO:0003678|GO:0016818
Acco07g0628 926 FunFam RAD3-like DNA-binding helicase protein 17 78 - -
Acco07g0628 926 Gene3D - 17 73 IPR027417 -
Acco07g0628 926 MobiDBLite consensus disorder prediction 169 210 - -
Acco07g0628 926 Pfam DEAD_2 220 408 IPR010614 GO:0003677|GO:0003678|GO:0005524
Acco07g0628 926 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-2 domain profile. 10 437 IPR014013 GO:0005524
Acco07g0628 926 Gene3D - 650 891 IPR027417 -
Acco07g0628 926 CDD SF2_C_XPD 637 876 - -
Acco07g0628 926 SMART Cxpdneu3 690 878 IPR006555 GO:0003676|GO:0004386|GO:0005524|GO:0006139|GO:0016818
Acco07g0628 926 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 11 403 IPR027417 -
Acco07g0628 926 MobiDBLite consensus disorder prediction 91 127 - -
Acco07g0628 926 NCBIfam DNA repair helicase (rad3) 207 907 IPR013020 GO:0003678
Acco07g0628 926 MobiDBLite consensus disorder prediction 68 127 - -
Acco07g0628 926 Gene3D - 194 436 IPR027417 -
Acco07g0628 926 Pfam Helicase C-terminal domain 672 889 IPR006555 GO:0003676|GO:0004386|GO:0005524|GO:0006139|GO:0016818
Acco07g0628 926 PANTHER DNA REPAIR DEAD HELICASE RAD3/XP-D SUBFAMILY MEMBER 13 919 IPR045028 -
Acco07g0628 926 SMART ultradead3 16 436 IPR014001 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco07g0628 Acco-ChrAcco07 7524297 7529003 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco07g0628 07 7524297 7529003 Acco07g0628 07 7524297 7529003 ECH