Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco07g0324 ATGGCCCTGGCAAAAGAAATCATGGGTTCTTCTTTGATGGAGAGATCTTCATTTGCTTCATCATCAAAATTGCTCCTTGGCCATAGTTTTCAGCAGAAGCAGTTCTTGGTGAGCCCTTTTGCAGTTCCTTTGGAGAAGAATAGAAGACAAGTGAGGTTGAGAAAAGCTTTGAACAACAACACCGTGGCGGCTATCAGTGAGGATTTGGTCAAGTCCTCTTCTTCTTCATCGTCATCATCTTCTACTTCTGTTCCTGCTGAGAAAGCAGTGACATTTAAGGTTAGAGCTGTAGTGACTGTTAGGAACAAGATCAAAGAGGATTTTAAGGAGACCCTTGTGAAGCATTTGGATGCAATCACTGACAGAATAGGCATGACCGTTGTTTTGGAGCTTGTCAGCACTGAGATTGACCCAAAGACGAAAGCCCCAAAGAAGAGCAATGAAGCTGTGCTAAAAGACTGGTCAAAGAAAATGAATGTGAAAGCAGAGAGAGTTAATTACACAGCAGAGTTCATGGTGGACTCAGATTTTGGGGAACCAGGAGCTATCACAGTGGTCAACAAACACCAACAAGAGTTCTTCATGGAAAGCATAACCATAGAAGGATTTGCTTGTGGTCCAGTTCATTTCCCCTGCCACTCCTGGGTTCAAGCTAAGAAAGATCTTCCTGGAAAGAGGATATTCTTTTCCAACAAGCCATATCTACCCCATGAGATACCAGCTGGGCTAAAAGTGCTGAGAGAGAAAGAACTGAGGAATCTAAGAGGTGACGGCTTAGGTGTTAGAAAATTATCAGACAGAATATATGACTTTGCCACCTACAATGATTTGGGCAATCCTGATAAAGGCTCAGACCTCTCTAGACCAACTCTCGGAGGCTCAGAAAAATACCCTTACCCGAGACGCTGTCGTACCGGCCGCCTCCCCTCCGACACAGATTTGTACACGGAGAGCCGTGTGGAGAAGCCATTGCCTATGTATGTTCCGAGAGATGAGAGATTTGAAGAGTCAAAGATGAACACATTCACAATCAAGAGGTTGAAGGCAGTGCTTCATAACTTGATCCCAGGGCTGAAGGCCAGCCTCTCTGCCAATAACAATGACTTCAATGAATTCTCCGACGTTGATGGATTGTACAGTGAAGGTCTCCTCATCAAATTGGGTTTGCAAGATCAAGTTCTCAACAAAGTCCCTCTGATCCGCAAGATTCATGAATCTAGTGGCCTTCTCAAGTTTGACACTCCCAAGATCCTTTCCAAGGACAAGTTTGCGTGGCTGCGAGATGACGAATTTGCCCGTCAAGCAATGGCAGGAATCAACCCTGTCAATATTGAGAAGCTCAAGGTTTTTCCACCTGTGAGCAACCTTGACCCTCAAATTTACGGCCCTCAAGAGTCTGCCCTAAGAGAAGAGCACATTCTGGGTCAACTCAATGGCATGACTGTTCAACAGGCAATAGATGAAGATAAGCTGTTCATTATAGACTACCATGACATCTATCTCCCGTTTCTTGATGGGATCAATGCTCTTGATGGTAGAAAATCCTACGCTACCCGCACCATCTTCTTCTTAACGCCCATGGGCACTCTGAAGCCTGTGGCTATAGAGCTCAGTCTGCCACCGGCCGGACCAAGTTCCCGATCAAAACGAGTGGTCACACCCCCGGTGGACGCCACCACCAACTGGATGTGGCAGCTTGCTAAGGCCCACGTCTGTTCCAATGACGCCGGCGTGCATCAACTTGTTAATCATTGGCTACGGACACATGCGTGCATGGAGCCGTTTATATTGGCAGCATACAGGCAATTAAGTGCAATGCACCCAATTTTCAAGCTATTGGATCCTCACATGAGGTACACGCTAGAGATCAATGCCTTGGCTCGCCAAAGTCTGATCAATGCTGATGGAATCATTGAGTCTTGTTTTACTCCTGGACGCTACTGCATGGAAATCAGTTCTGCTGCCTACAAAAACTTGTGGCGCTTCGACATGGAGAACCTCCCTGCCGATCTCCTCCGCAGGGGAATGGCGGTTCCTGATCCGACTCAACCTCATGGTCTGAGGCTGCTCATAGAAGACTACCCTTATGCTGCCGATGGACTCATGATCTGGTCCTCCATACAGAACTGGGTTCGCACCTATGTGAACCATTACTACCCTGACCCTGACCTAGTGGCTCAAGACAAGGAGCTTCAAGCTTGGTACTCTGAGTCCATCAATGTAGGCCATGCTGACCTCAGACATGAACCTTGGTGGCCACCATTGAACACAAGTGACGACCTCGTCTCCATCCTCACAACCTTGATTTGGAACGCTTCTGCACAGCATGCTGCCCTTAATTTCGGGCAGTACCCTTATGGAGGGTACGTGCCCAATCGCCCTCCGCTGATGAGAAGACTAATCCCGGACGAGAGTGACCCTGAATATGCAAGTTTCCTAGCAGACCCTCAGAGATACTTCCTCAATGCCATGCCTAGCTTGTTGCAAGCTACAAAATTTATGGCCGTGGTTGATACTCTGTCCACTCACTCGCCAGACGAGGAGTACCTCGGGGAGCGGCAGCAACCGTCGACCTGGACTGGGGACACCGAGATGGTGGAGGCCTTCTACGGGTTCTCAGCCAAGATCATGCAGATTGAGAAGGAGATTGACAAGAGGAACCGTGACAGGACACTGAGGAACCGATGTGGTGCTGGAGTGTTGCCTTATGAGCTGCTTGCTCCTACCTCTGAACCCGGCGTCACGTGTAGAGGTGTTCCAAACAGTGTGTCCACCTGA 2778 0.4827 MALAKEIMGSSLMERSSFASSSKLLLGHSFQQKQFLVSPFAVPLEKNRRQVRLRKALNNNTVAAISEDLVKSSSSSSSSSSTSVPAEKAVTFKVRAVVTVRNKIKEDFKETLVKHLDAITDRIGMTVVLELVSTEIDPKTKAPKKSNEAVLKDWSKKMNVKAERVNYTAEFMVDSDFGEPGAITVVNKHQQEFFMESITIEGFACGPVHFPCHSWVQAKKDLPGKRIFFSNKPYLPHEIPAGLKVLREKELRNLRGDGLGVRKLSDRIYDFATYNDLGNPDKGSDLSRPTLGGSEKYPYPRRCRTGRLPSDTDLYTESRVEKPLPMYVPRDERFEESKMNTFTIKRLKAVLHNLIPGLKASLSANNNDFNEFSDVDGLYSEGLLIKLGLQDQVLNKVPLIRKIHESSGLLKFDTPKILSKDKFAWLRDDEFARQAMAGINPVNIEKLKVFPPVSNLDPQIYGPQESALREEHILGQLNGMTVQQAIDEDKLFIIDYHDIYLPFLDGINALDGRKSYATRTIFFLTPMGTLKPVAIELSLPPAGPSSRSKRVVTPPVDATTNWMWQLAKAHVCSNDAGVHQLVNHWLRTHACMEPFILAAYRQLSAMHPIFKLLDPHMRYTLEINALARQSLINADGIIESCFTPGRYCMEISSAAYKNLWRFDMENLPADLLRRGMAVPDPTQPHGLRLLIEDYPYAADGLMIWSSIQNWVRTYVNHYYPDPDLVAQDKELQAWYSESINVGHADLRHEPWWPPLNTSDDLVSILTTLIWNASAQHAALNFGQYPYGGYVPNRPPLMRRLIPDESDPEYASFLADPQRYFLNAMPSLLQATKFMAVVDTLSTHSPDEEYLGERQQPSTWTGDTEMVEAFYGFSAKIMQIEKEIDKRNRDRTLRNRCGAGVLPYELLAPTSEPGVTCRGVPNSVST 925
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco07g0324 925 Gene3D - 423 556 - -
Acco07g0324 925 Gene3D PLAT/LH2 domain 79 234 - -
Acco07g0324 925 ProSiteProfiles PLAT domain profile. 108 230 IPR001024 GO:0005515
Acco07g0324 925 FunFam Lipoxygenase 558 924 - -
Acco07g0324 925 Pfam PLAT/LH2 domain 151 229 IPR001024 GO:0005515
Acco07g0324 925 ProSiteProfiles Lipoxygenase iron-binding catalytic domain profile. 233 925 IPR013819 GO:0016702|GO:0046872
Acco07g0324 925 PRINTS Plant lipoxygenase signature 200 218 IPR001246 GO:0016491
Acco07g0324 925 PRINTS Plant lipoxygenase signature 226 247 IPR001246 GO:0016491
Acco07g0324 925 PRINTS Plant lipoxygenase signature 265 281 IPR001246 GO:0016491
Acco07g0324 925 PRINTS Plant lipoxygenase signature 366 387 IPR001246 GO:0016491
Acco07g0324 925 PRINTS Plant lipoxygenase signature 516 540 IPR001246 GO:0016491
Acco07g0324 925 PRINTS Plant lipoxygenase signature 449 468 IPR001246 GO:0016491
Acco07g0324 925 PRINTS Plant lipoxygenase signature 410 426 IPR001246 GO:0016491
Acco07g0324 925 PRINTS Plant lipoxygenase signature 298 317 IPR001246 GO:0016491
Acco07g0324 925 PRINTS Plant lipoxygenase signature 837 851 IPR001246 GO:0016491
Acco07g0324 925 ProSitePatterns Lipoxygenases iron-binding region signature 1. 579 593 IPR020833 GO:0016702|GO:0046872
Acco07g0324 925 PRINTS Lipoxygenase signature 561 578 IPR013819 GO:0016702|GO:0046872
Acco07g0324 925 PRINTS Lipoxygenase signature 599 619 IPR013819 GO:0016702|GO:0046872
Acco07g0324 925 PRINTS Lipoxygenase signature 579 596 IPR013819 GO:0016702|GO:0046872
Acco07g0324 925 PANTHER LIPOXYGENASE 94 924 IPR000907 GO:0016702|GO:0034440|GO:0046872
Acco07g0324 925 SMART LH2_4 92 231 IPR001024 GO:0005515
Acco07g0324 925 SUPERFAMILY Lipase/lipooxygenase domain (PLAT/LH2 domain) 92 234 IPR036392 GO:0005515
Acco07g0324 925 Gene3D - 338 422 IPR027433 -
Acco07g0324 925 FunFam Lipoxygenase 424 556 - -
Acco07g0324 925 FunFam Lipoxygenase 235 337 - -
Acco07g0324 925 SUPERFAMILY Lipoxigenase 235 924 IPR036226 -
Acco07g0324 925 Gene3D - 558 924 - -
Acco07g0324 925 Gene3D - 235 337 - -
Acco07g0324 925 CDD PLAT_LH2 92 231 IPR042057 -
Acco07g0324 925 ProSitePatterns Lipoxygenases iron-binding region signature 2. 606 616 IPR020834 GO:0016702|GO:0046872
Acco07g0324 925 Pfam Lipoxygenase 242 908 IPR013819 GO:0016702|GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco07g0324 Acco-ChrAcco07 3568460 3573954 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco07g0324 1 924 Acyl Lipid Metabolism Gene Families AT1G17420 73.176 0.0 1412
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco07g0324 07 3568460 3573954 Acco07g0324 07 3568460 3573954 ECH