Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco07g0257 ATGGCAGAGAAATCATGTGTCAAGCGCCTTCAGAAGGAATTTAGAGCTCTTTGTAAAGAGCCTGTGTCCCATATTGTTGCTCGTCCATCACCTAATGATATACTTGAGTGGCATTATGTGTTGGAAGGAAGTGAGGGAACACCTTTTGCAGGTGGATATTATTATGGAAAAATCAAGTTTCCTCCTGAATATCCATATAAACCTCCTGGAATCAGCATGACTACACCTAATGGACGCTTCATTACACAGAAAAAGATCTGCTTGTCCATGAGTGATTTTCATCCAGAAAGTTGGAATCCTATGTGGTCCGTATCAAGCATACTTACGGGTCTTCTATCCTTCATGGTGGACACTAGTCCAACGACTGGCAGCGTGAGCACTACTACCGAAGAGAAGCAACGTTTAGCAAAATCTTCCCTTGCTTTCAATTGCAAGAATGCAACATTCAGGAAAATGTTCCCCGAGTATGTTGATAAGTACAATCAGCGGCTTTCTGAGCAAGCTGCCTCTGAACAAACAGCATCTGAGGTGGCATCTCGTGATAAGAGTTCAAGGCCCATGTTGAGAAAAGTTACAGAGTCTATTGGAGAAGACATGAAAGTAGCAGCAGAGGGATTGAAAGAGGTGAGGAAGAACAGAAAGCAATCTTTACCCACATGGATGATGTTGTTGCTCTTCTCGATTTTTGGGCTCATAATGGCATTGCCTCTGCTTCAGCTGTGA 723 0.4315 MAEKSCVKRLQKEFRALCKEPVSHIVARPSPNDILEWHYVLEGSEGTPFAGGYYYGKIKFPPEYPYKPPGISMTTPNGRFITQKKICLSMSDFHPESWNPMWSVSSILTGLLSFMVDTSPTTGSVSTTTEEKQRLAKSSLAFNCKNATFRKMFPEYVDKYNQRLSEQAASEQTASEVASRDKSSRPMLRKVTESIGEDMKVAAEGLKEVRKNRKQSLPTWMMLLLFSIFGLIMALPLLQL 240
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco07g0257 240 Gene3D Ubiquitin Conjugating Enzyme 1 179 IPR016135 -
Acco07g0257 240 SUPERFAMILY UBC-like 5 156 IPR016135 -
Acco07g0257 240 ProSiteProfiles Ubiquitin-conjugating (UBC) core domain profile. 5 162 IPR000608 -
Acco07g0257 240 SMART ubc_7 8 162 - -
Acco07g0257 240 FunFam Ubiquitin-conjugating enzyme E2 34 1 177 - -
Acco07g0257 240 MobiDBLite consensus disorder prediction 167 188 - -
Acco07g0257 240 CDD UBCc 7 157 IPR000608 -
Acco07g0257 240 PANTHER UBIQUITIN-CONJUGATING ENZYME E2 6 164 - -
Acco07g0257 240 Pfam Ubiquitin-conjugating enzyme 9 124 IPR000608 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco07g0257 Acco-ChrAcco07 2764951 2766876 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco07g0257 1 240 Miscellaneous Gene Families AT1G17280 73.859 4.70e-135 378
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco07g0257 07 2764951 2766876 Acco07g0257 07 2764951 2766876 ECH