Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco06g2442 ATGAAGTTCAATAAATTTCTGAGTAGTGAAATATTAATACTCATAAATATTTATAACTCGAATTCGTACTTTTTACTAATATGGAGCATGAACTCGCTCTTTATTAAGAGGAAGAAGAGGGACAGAGCCAAAGGACCCACTAATGATGTTGTGAAAATGAGGGAGCTTCCGGTGAAGGTTTTGGAATTTCCTACTAAATGCATACATGTGCTCGCAGCTAATGGTGCTTATACTGTGAGACTTGGTTATTTGGCTGCAAGAATGAGAGGACTCTATTGTGCACCTTTTTCTTTGTTTGCTTGTAGACTAGATGTGTCTAGTTTGGTTGTAGCCTTGGAGCCAAAATTGGTGCTTTCCAGGTGTTCTTGTGTTCTCCACCAACGGCTAATTTTGCTCTTGAGGATTGCATCTCTTGTAGAATCTGATTCGTCTCCTGTGCTATATATACATCTTCTTGCAGCCTCCATGTCAAGCCATAAAGAGAAAACTGAGCAACAAATACGAGGAGCTATGTTTAGAAATAAGAAGTGCAGAAACCAAAATAAAGGGGAGGCACAAATCATCTGCTGCAACTGCAGGGGAGATTTTTATGTGCCTCCAACCACAACCACATACCGTTGTCCTCGGTGCCAAGCAATCACTGCTAGTTCATCAAGAAATGGGCAATCAAATAAAGATAGAGGCAATGAAATGGGGTTGGTGAAATCTTCTTTTACCACTACGAATATCATCAAATCTGATCTTATATCACAGAATGCTAGCAAAAGTTCAAATGTTTTGAATCAAAGCCTGCGTTCATTTTCATCGGTACGCTCTTTCTCCTCCTCATCCGGACGAAGCAATAAGCGTGCAGTTCTCTGTGGAGTTACTTACAGAAAAAAGAGGTACAGACTCAAAGGACCTGTTAATGATGTTGCCAACATGAGGGAGCTTCTGGTGAAGGCTTTTGACTTTCCTACTGAATACATACATGAGCTCACAGAAGAGAAACAGAGTGAAAATTTCTATCCAACAAAGAAAAACATACTGCGAGAATTGAAGTGGCTTGTGGAAGACTGCCAGAAAGGAGACTCACTGGTGTTTTACTTCTCAGGACATGGCATCCAACAAACAGATTCTAAAGAAGATGAGATAGATGCGATGGACGAAAGCATTTGCCCGGTTGATTTTCTACATGAAGGCACGATTCTCGACGATGAAATCAACTATATTCTTGTTTGGCCCCTCGTAGAAGGTGTCACACTTCATGTCATTGTTGATGCTTGTCATAGTGGAACTGTCCTTGATCTCTCATATGTCTATGACCCTGAAAAATGCACATGGAAAGATAACAAGCCTCCTTCCAAAGAACCTTCCAGAAAGGGTCCGAGTGGGGGACGGGCAATTTGTATTAGTGCTTGTCAAGATCATCAGATGGCTGCTGATACTTCAGCTTTCCGAGGGAAGGGAATGAATGGTGTGATGACATATATTTTCACAAAAGTCATCAAACAAAATCCTGATACAACTTATGGGGGTTTAATGGAACAGATGACGAAGGAAATTGAAGAGATTATGATAAATAATTGTCGTCCATCTTTTTTTCAACACATGTTTCGCCCCAGAATTGTGCAGGATATTGTTATATCATCATCTGAAAAGTTTGATCTTTCTCGGACTATATTCAAATTATGA 1674 0.4014 MKFNKFLSSEILILINIYNSNSYFLLIWSMNSLFIKRKKRDRAKGPTNDVVKMRELPVKVLEFPTKCIHVLAANGAYTVRLGYLAARMRGLYCAPFSLFACRLDVSSLVVALEPKLVLSRCSCVLHQRLILLLRIASLVESDSSPVLYIHLLAASMSSHKEKTEQQIRGAMFRNKKCRNQNKGEAQIICCNCRGDFYVPPTTTTYRCPRCQAITASSSRNGQSNKDRGNEMGLVKSSFTTTNIIKSDLISQNASKSSNVLNQSLRSFSSVRSFSSSSGRSNKRAVLCGVTYRKKRYRLKGPVNDVANMRELLVKAFDFPTEYIHELTEEKQSENFYPTKKNILRELKWLVEDCQKGDSLVFYFSGHGIQQTDSKEDEIDAMDESICPVDFLHEGTILDDEINYILVWPLVEGVTLHVIVDACHSGTVLDLSYVYDPEKCTWKDNKPPSKEPSRKGPSGGRAICISACQDHQMAADTSAFRGKGMNGVMTYIFTKVIKQNPDTTYGGLMEQMTKEIEEIMINNCRPSFFQHMFRPRIVQDIVISSSEKFDLSRTIFKL 557
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco06g2442 557 PANTHER METACASPASE-4 279 549 - -
Acco06g2442 557 Pfam Caspase domain 282 531 IPR011600 GO:0004197|GO:0006508
Acco06g2442 557 Gene3D - 220 557 - -
Acco06g2442 557 SUPERFAMILY Caspase-like 285 533 IPR029030 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco06g2442 Acco-ChrAcco06 21157917 21168479 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco06g2442 06 21157917 21168479 Acco06g2442 06 21157917 21168479 CCT
Acco06g2442 06 21157917 21168479 Acco06g2442 06 21157917 21168479 ECH