Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco06g2400 ATGACGTCTCTCAATTTCTCCTGCTCTTCTCCAGTATCTCTCTCGCGTCCTCGGGCATTACAGCATTTAAAATTTTTCAATGGCTTGCATTCTATTCATGGACTTGGATCTGATTTGGCAATTGTTCGATTAAGTTCTAAATTCTTGCCAAGTGACAAGAGTGTTGGTAGAATCAAGGCAACTCTTATATCTGGAGGAGATGACCTTGTTTTAAATTCAAATGGCAATAATATTGAGAAACAAACCGAAGCATTTGAACGTGGAACACTAGCAGCTAATACAGTCACAACAAGCATTGGTTTTCCTGATGATAATAATGATAGTGATGAACTAGATTTTGACATCCCCACAGAAAGTTTTGCTTCCATCCCAGAGGCTATTGAGGATATTCGCCAGGGAAAGATGGTAGTGGTTGTTGATGATGAGGACAGGGAAAATGAAGGAGACTTGATAATGGCTGCACAGTTAGCAACACCTGAGGCTATGGCTTTTATTGTGAAGCATGGAACTGGGATAGTGTGCGTAAGCATGAAAGAGGAAGATCTGGAGAGATTGGAACTTCCTTTGATGGTAGACAGTAAAGATAATGATGAGAAACTTCGCACTGCATTTACTGTGACAGTGGATGCTAAACAAGGTACCACCACAGGGGTGTCAGCGGCTGATAGGGCAACAACAGTCTTGGCTCTTGCATCAAGGGATTCAAAACCGTCTGATTTTAATCGCCCAGGCCATATATTTCCATTAAAATACCGGGAAGGTGGTGTCTTGAAGAGAGCTGGACATACAGAAGCTTCAGTAGATCTGGCTATACTTGCAGGTTTGGAACCTGCGGCAGTTCTATGTGAAGTTGTGGATGATGATGGTTCCATGGCTAGACTGCCAAAGCTTCGCCAGTTTGCAGAGCATGAAAACTTGAAAATAATTTCTATTGCTGACTTAATAAGATATAGAAGGAAGAGAGATAAATTAGTATTTCTTGCTGGTGCTGCGCAAATCCCTACAAAGTGGGGGCCATTCACGTCTCACTGTTACAGATCACTTTTAGATGGGATGGAACACATTGCAATGGTTAAGGGTGACATAGGGGATGGAAAAGATGTTCTTGTGAGGGTGCACTCTGAGTGTCTAACTGGAGATATATTTGGATCTGCCAGATGTGATTGTGGGAATCAGCTTGGGCTTGCGATGCAGCAGATTGAGGCTGCTGGTAGGGGTGTCTTGGTATATCTCCGTGGACACGAAGGAAGAGGTATTGGGCTTGGCCACAAGCTTCGTGCATATAACTTACAGGATGATGGACGAGATACTGTAGAAGCCAACGAGGAGTTGGGTTTGCCTGTTGACTCGAGGGAATATGGTATTGGTGCACAGATTTTGAGGGACTTGGGTGTTCGGTCAATGAAGCTGATGACAAACAATCCAGCAAAATATGTTGGGCTTAAAGGTTATGGTTTGACAATTTCTGGTAGGATCCCATTAGTAGCCCTCATCACGAAGGAAAACCAGAGATATCTGGAGACAAAACGTGCCAAAATGGGCCACATCTATGGTCTGGAATCCAACAACCAGTTGAACAGTTATGCCACTAGCAATGGTAAAGTCAATGCTGATGATTCTAAGAATGCTGCTCCTGGCTCATGA 1644 0.4343 MTSLNFSCSSPVSLSRPRALQHLKFFNGLHSIHGLGSDLAIVRLSSKFLPSDKSVGRIKATLISGGDDLVLNSNGNNIEKQTEAFERGTLAANTVTTSIGFPDDNNDSDELDFDIPTESFASIPEAIEDIRQGKMVVVVDDEDRENEGDLIMAAQLATPEAMAFIVKHGTGIVCVSMKEEDLERLELPLMVDSKDNDEKLRTAFTVTVDAKQGTTTGVSAADRATTVLALASRDSKPSDFNRPGHIFPLKYREGGVLKRAGHTEASVDLAILAGLEPAAVLCEVVDDDGSMARLPKLRQFAEHENLKIISIADLIRYRRKRDKLVFLAGAAQIPTKWGPFTSHCYRSLLDGMEHIAMVKGDIGDGKDVLVRVHSECLTGDIFGSARCDCGNQLGLAMQQIEAAGRGVLVYLRGHEGRGIGLGHKLRAYNLQDDGRDTVEANEELGLPVDSREYGIGAQILRDLGVRSMKLMTNNPAKYVGLKGYGLTISGRIPLVALITKENQRYLETKRAKMGHIYGLESNNQLNSYATSNGKVNADDSKNAAPGS 547
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco06g2400 547 Gene3D DHBP synthase 112 325 - -
Acco06g2400 547 Hamap 3,4-dihydroxy-2-butanone 4-phosphate synthase [ribB]. 118 322 IPR000422 GO:0008686|GO:0009231
Acco06g2400 547 FunFam Bifunctional riboflavin biosynthesis protein RIBA 1 chloroplastic 111 324 - -
Acco06g2400 547 Hamap Riboflavin biosynthesis protein RibBA [ribBA]. 119 515 IPR016299 GO:0009231
Acco06g2400 547 PANTHER GTP CYCLOHYDROLASE II-RELATED 119 521 - -
Acco06g2400 547 Pfam 3,4-dihydroxy-2-butanone 4-phosphate synthase 125 317 IPR000422 GO:0008686|GO:0009231
Acco06g2400 547 SUPERFAMILY YrdC/RibB 119 321 IPR017945 -
Acco06g2400 547 Pfam GTP cyclohydrolase II 330 493 IPR032677 -
Acco06g2400 547 FunFam Riboflavin biosynthesis protein RibBA 325 496 - -
Acco06g2400 547 Hamap GTP cyclohydrolase-2 [ribA]. 323 519 IPR000926 GO:0003935|GO:0009231
Acco06g2400 547 SUPERFAMILY RibA-like 325 494 IPR036144 -
Acco06g2400 547 Gene3D GTP cyclohydrolase II 326 496 IPR036144 -
Acco06g2400 547 NCBIfam GTP cyclohydrolase II 331 516 IPR000926 GO:0003935|GO:0009231
Acco06g2400 547 CDD GTP_cyclohydro2 324 516 IPR000926 GO:0003935|GO:0009231
Acco06g2400 547 NCBIfam 3,4-dihydroxy-2-butanone-4-phosphate synthase 120 318 IPR000422 GO:0008686|GO:0009231
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco06g2400 Acco-ChrAcco06 20210992 20216382 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco06g2400 06 20210992 20216382 Acco06g2400 06 20210992 20216382 ECH