Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco06g2344 ATGGCTTCATCGGAGATCGAGGTGGTGTCATCGGACTCTAAAACTCCAAAAGTTTCCGATGCTCCTCAAGTAGTAGACGTGTTTTCTGCCTGTATTTGTGGGGACCTAGAGAAATTGAGGTGGTTTGTGGAACAAGAAGGCGCCTCCTTTTCTGTTCCTGATTCCAATAGCTATTATGCTCTCCAATGGGCATCCCTTAATAACTTCCCAGATATTGTGCAGTATGCCATTAAGCACGGGGGCGATGTCAACGCTACTGACCACATGCAACAAACGGCACTACACTGGGCAGCAGTTCGTGGTGCAACTGCAGTGGCTGATTTGCTCTTGGATAACGGTGCCCGGCTTGAGTCTGCTGATATATATGGATACAGGGCAGTTCATGTTGCTGCTCAACATGGACAAACAACTTTCTTAAATCACATCATTGCAAAGTATAATGCTGACTTTGATGCACCCGATAATGAGGGACGAAGTCCTCTACATTGGGCTGCCTATAAGGGGTTTGCTGATACAATCCGATTGCTTCTATTCCGGGATGCATGCCAAGGGAGACAAGATAAAGATGGTTGTACGCCATTGCACTGGGCTGCATTAAGGGGAAATGCAGAGGCATGCATGGTGCTTGTACACTCGGGCACAAAGAAAGAACTGGTGGTGAAGGACAAAGCTGGATTTACTCCTGTACAGCTTGCACATGATAAAGGTCATCGGCATGTCGCCCTTTTCCTTTCTAATCAACAGAGAGCTCTGAGCAACCACTGGAGAGACAAAATTTGTAGTGGGAGGGTGACAGATATTGGTTATGCTCCCATTTTATTTTGTATCATAATCTTTGAAATGTTCCTCTTCATGAACTCAGTCGTTGCAGGTTCTAGCTTTCAAAAGATTACTGCTGGTGTTGGCCTTTGGGCTTGGACAGCTCTTTCTCTGGCAGCTGGTTCCTTGATTATGTTATATAGGTGCAGTAGGAAAAATCCTGGTTATATAAAACGACCAGGAGATTCAGGTGCTCATGGTGATGCAGAGGATCCTTTGTTGAATATTGACCTGAACAGCTCCTCTGTTTGGACAGGAAATTGGTCTCAACTTTGCCCAACCTGCAAGATAATAAGAGCTGTTCGATCTAAGCATTGCCCTGCTTGTAAGCGTTGTGTGGAACAATTTGACCACCATTGCCCATGGATATCTAACTGTGTCGGAAAGAGGAACAAAAGGGATTTCTTTATTTTTGTTTGCCTGGCAACTTTGGCATCATCCATTAGCGGTGCTGTTACGGTTCAAAGAATTCGGACATCATCACTCGGATTGTCAGAAGGAGAAACATGGATCCATCATTTGTTAGTACAGCATCCTGGTGCTATTGTATTTCTGGTGCTGGACACTTTTATATTCATTGCTGCTGTAACTTTGACGTTAACACAGGCTTCAATGATAGCTCGGAATATCACCACAAATGAAGTGGCAAACTCTTCTCGATATGTGTATCTCCGCGGTCCTGATGGGAAGTTTAGAAATCCATACAACCATGGCTGTTGGAAGAATTGTTCTGACTTCTTTTTTCAGGGCTATACAAATGATGATGACATTGCTTGGCCTCCATTACAGCGGGCGGCGGCAACGTAG 1626 0.4483 MASSEIEVVSSDSKTPKVSDAPQVVDVFSACICGDLEKLRWFVEQEGASFSVPDSNSYYALQWASLNNFPDIVQYAIKHGGDVNATDHMQQTALHWAAVRGATAVADLLLDNGARLESADIYGYRAVHVAAQHGQTTFLNHIIAKYNADFDAPDNEGRSPLHWAAYKGFADTIRLLLFRDACQGRQDKDGCTPLHWAALRGNAEACMVLVHSGTKKELVVKDKAGFTPVQLAHDKGHRHVALFLSNQQRALSNHWRDKICSGRVTDIGYAPILFCIIIFEMFLFMNSVVAGSSFQKITAGVGLWAWTALSLAAGSLIMLYRCSRKNPGYIKRPGDSGAHGDAEDPLLNIDLNSSSVWTGNWSQLCPTCKIIRAVRSKHCPACKRCVEQFDHHCPWISNCVGKRNKRDFFIFVCLATLASSISGAVTVQRIRTSSLGLSEGETWIHHLLVQHPGAIVFLVLDTFIFIAAVTLTLTQASMIARNITTNEVANSSRYVYLRGPDGKFRNPYNHGCWKNCSDFFFQGYTNDDDIAWPPLQRAAAT 541
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco06g2344 541 ProSiteProfiles Ankyrin repeat region circular profile. 189 213 - -
Acco06g2344 541 ProSiteProfiles Ankyrin repeat profile. 56 88 IPR002110 GO:0005515
Acco06g2344 541 ProSiteProfiles Ankyrin repeat region circular profile. 89 120 - -
Acco06g2344 541 Gene3D - 3 142 IPR036770 -
Acco06g2344 541 SMART ANK_2a 89 118 IPR002110 GO:0005515
Acco06g2344 541 SMART ANK_2a 224 253 IPR002110 GO:0005515
Acco06g2344 541 SMART ANK_2a 56 85 IPR002110 GO:0005515
Acco06g2344 541 SMART ANK_2a 156 185 IPR002110 GO:0005515
Acco06g2344 541 SMART ANK_2a 122 152 IPR002110 GO:0005515
Acco06g2344 541 SMART ANK_2a 189 218 IPR002110 GO:0005515
Acco06g2344 541 Gene3D - 143 249 IPR036770 -
Acco06g2344 541 ProSiteProfiles Ankyrin repeat profile. 89 121 IPR002110 GO:0005515
Acco06g2344 541 SUPERFAMILY Ankyrin repeat 28 246 IPR036770 -
Acco06g2344 541 ProSiteProfiles Ankyrin repeat profile. 156 188 IPR002110 GO:0005515
Acco06g2344 541 ProSiteProfiles Ankyrin repeat profile. 122 155 IPR002110 GO:0005515
Acco06g2344 541 PANTHER ANK_REP_REGION DOMAIN-CONTAINING PROTEIN-RELATED 26 524 - -
Acco06g2344 541 ProSiteProfiles DHHC domain profile. 363 413 - -
Acco06g2344 541 FunFam S-acyltransferase 143 251 - -
Acco06g2344 541 Pfam Ankyrin repeats (3 copies) 128 216 IPR002110 GO:0005515
Acco06g2344 541 Pfam Ankyrin repeats (3 copies) 30 118 IPR002110 GO:0005515
Acco06g2344 541 Pfam DHHC palmitoyltransferase 363 490 IPR001594 GO:0016409
Acco06g2344 541 ProSiteProfiles Ankyrin repeat region circular profile. 156 177 - -
Acco06g2344 541 FunFam S-acyltransferase 11 142 - -
Acco06g2344 541 ProSiteProfiles Ankyrin repeat profile. 189 221 IPR002110 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco06g2344 Acco-ChrAcco06 19149265 19165421 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco06g2344 33 237 Miscellaneous Gene Families AT2G31820 26.794 2.41e-10 61.2
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco06g2344 06 19149265 19165421 Acco06g2344 06 19149265 19165421 ECH