Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco06g2159 ATGGAAATGCACATTATGGACTCAGACTGGGAGACTTTCAGTGAGAGCAGCAGCAGTGAGGATCAAGAGGAAATTGACTTTCTATATGCTGGGCAAGCTCGGAGCATACTATCCAGTTTAGAGGAAAGCATTGGGAAAATTGATGATTTCCTTTCATTTGAAAGAGCATTTGTTCATGGGGATGTGGTTTGTTCCTTGTCAAATCCATCTGGACAGATGGGCAGGGTTACAGGTGTTGATATGTTTGTAGATTTGGAAAGTGTTCATGGAAAATTATTAAAAAATGTAAACTCTAAGAGGCTTTTCAAAATCCGCTCCATTTCAGAAGGTGATTTTGTGATTAAGGGCCCATGGCTTGGAAGAGTTCAAAAGGTGGTGGACAAAGTAACTGTATTATTTGATGATGGAGCTACATGTGAGGTCACCACATTGGAAAGAGATAAGATCTCGCCTCTGACTCGTAATTTGCTTGAAGACTTACAGTATCCATTCTATCCAGGGCAGAGAGTAAAGGTTAATTCCTCATCTTCTTCTAAGTCAGGTAGACGGTTATGTGGAACTTGGAGAGACAGTCAAGATGAAGGAACCGTTTGTTCTGTTGAAGCAGGTCTAGTGTTTGTTAACTGGCTCATATTTGTTCCCATGGATCCTGATTTTCTGGTAAATGCTCCCCCACGCTGGCAAGATTCCAAAAACTTGACCTTGCTCTCGTGTTTTTCACATGCAAACTGGCAGCTTGGTGACTGGTGCATGCTTGCAGTGCCAGACCAAAGGGATCAGATGGAAGAGAATTTTGGAAATACATCTACCAGGGGTCTAACTAAGGAGAACACTATGACAAGAGGAGATAAAAATGGAAACGTTCACTTCAATATTGGGGAACTTTTTGTAATTGGGAAAATAAGGACCAAAGTTGATATTGTATTGCAGGATGGTGAACAGACTTTGGGAATCGATCCCCATACTCTACTCCCAGTGAATGTCATAGACACTCATGAATTTTGGCCTCAGCAGTATGTGTTGGAAAAAGGTGCTTCTGATGATCATCCTAAGCCCAGCTGTCAAAGATGGGGAGTTGTTCTGTCTGTGGATGCAAAAGAGCGTACTGTAAAGGTACAATGGAATACTGTTTCCATATCCATGCCAGAGAATTTGGCTGGAGATAGGATGGAGGAAACTGTGAGTGCCTACGAACTCATAGAGCACCCAGACTACTCCTATTGTTTTGGTGATATTGTATTCAAGGCGGCTCAAAAACAGCTTGGTTACCAAGCTGAGAAAGATCAAGCAAAGTCAGCAACTGACTTGAATGTGGAGGCTGCTCTTATGGATAGGAACCACATCAGTTATCAGAATGAGTTCCCTGATAACTGTTACCTGTCCTGTATTGGCAACGTTGTTGGTTTCAGAGATGGTGCTGTGGAGGTGAAATGGGCTACTGGTTTAACAACCAAGGTTGCACCTCATGAAATTTTTCGAATTGATAAGCATGAAGGTTCAACTGAAACCACTGTTCCAAATGAAGCAGATATTGAGGAATTGACTCAAGAGATGACTGAGATTGGAAATCTAACTTCTGACAAAAAGGGAAAGGGCTTGTTAGATTTTGATGGTGATAGATTGAATTGTGAAAGTCATCCAGGGGAATCTAGTACCTTTTCCCTTCCTCGAGCTGCCATTGAAATTTTCTCCAGCATTAAGGCTGGCATTTTTCAGACATTTGGAGTAACATCTCTTCCACCAGCAGTTTCTTTAGTCCCTACGACTGAAGAGGGAAATCAATCTGACAATCTTAGTAAGAAAGAGGTTTCAGAAACTTGTGAGCTTTGCCCTGAAGCAAATCTGATGAGTGAATTGCAGTCTGCTGAAGACATGACTCTTGATCAGGATGTTGTTAGATTTTCTGAGAGGAAAAATCTTCCATTTTCTTCAAATAGCAACAATCCAGAAGGGTTTAAGCAGTTTGATATAATAGACAATTGTTCAGACCACCACTTCTTTGATGAGCAAAAAGGGTTGGCATTATCTCAGGTGAAAAGAGGATGGGTGAAAAGGATTCAACAAGAATGGAGCATCCTAGAGAGAAATCTTCCAGAAACTATTTATGTCCGTGTGTTTGAAGAAAGAATGGATCTCCTGCGAGCAGCTATTGTTGGTGCACCTGGCACTCCTTATCATGATGGCTTATTCTTCTTTGATGTTTGTTTCCCTCCAGAGTATCCTAATGAACCACCTATGGTGCACTACCATTCAGGTGGTCTCAGATTAAACCCTAATCTGTACGAATCAGGAAATGTCTGTCTGAGCCTCCTGAATACATGGACTGGTACAGGCAGTGAAATGTGGAACCCAGGGGCCTCCACAATTCTTCAAGTCCTTCTCTCTCTGCAGGCCCTTGTCCTTAATGAAAAGCCTTATTTCAATGAGGCTGGATATGACCAGCAGATTGGCAGAGCCGAAGGAGAGAAGAACTCAGTGAGCTACAATGAAAATGCTTTCCTCGTCACCTGCAAATCAATGCTTTATCTACTGAGAAAGCCACCCAAGCATTTTGAGTTACTCGTGGAAGAGCACTTCAGCCAACGCGCGCAACACATACTTGTCACTTGTAAGGCATACGGTGAAGGAGCTGCCATTGGTTGTGCTTTTGATTGTGGAAAAGCCATGCACCAAAATCAGAAGGGAACTTCTACAGGTTTCAAAATCATGCTAGCCAAGCTCTTCCCCAAGCTCGTCGAGGCTTTCTCCGGTAAAGGAATTGATTGCAGCCAGTTTGTTCAGTTGCAGAAGTAG 2793 0.4253 MEMHIMDSDWETFSESSSSEDQEEIDFLYAGQARSILSSLEESIGKIDDFLSFERAFVHGDVVCSLSNPSGQMGRVTGVDMFVDLESVHGKLLKNVNSKRLFKIRSISEGDFVIKGPWLGRVQKVVDKVTVLFDDGATCEVTTLERDKISPLTRNLLEDLQYPFYPGQRVKVNSSSSSKSGRRLCGTWRDSQDEGTVCSVEAGLVFVNWLIFVPMDPDFLVNAPPRWQDSKNLTLLSCFSHANWQLGDWCMLAVPDQRDQMEENFGNTSTRGLTKENTMTRGDKNGNVHFNIGELFVIGKIRTKVDIVLQDGEQTLGIDPHTLLPVNVIDTHEFWPQQYVLEKGASDDHPKPSCQRWGVVLSVDAKERTVKVQWNTVSISMPENLAGDRMEETVSAYELIEHPDYSYCFGDIVFKAAQKQLGYQAEKDQAKSATDLNVEAALMDRNHISYQNEFPDNCYLSCIGNVVGFRDGAVEVKWATGLTTKVAPHEIFRIDKHEGSTETTVPNEADIEELTQEMTEIGNLTSDKKGKGLLDFDGDRLNCESHPGESSTFSLPRAAIEIFSSIKAGIFQTFGVTSLPPAVSLVPTTEEGNQSDNLSKKEVSETCELCPEANLMSELQSAEDMTLDQDVVRFSERKNLPFSSNSNNPEGFKQFDIIDNCSDHHFFDEQKGLALSQVKRGWVKRIQQEWSILERNLPETIYVRVFEERMDLLRAAIVGAPGTPYHDGLFFFDVCFPPEYPNEPPMVHYHSGGLRLNPNLYESGNVCLSLLNTWTGTGSEMWNPGASTILQVLLSLQALVLNEKPYFNEAGYDQQIGRAEGEKNSVSYNENAFLVTCKSMLYLLRKPPKHFELLVEEHFSQRAQHILVTCKAYGEGAAIGCAFDCGKAMHQNQKGTSTGFKIMLAKLFPKLVEAFSGKGIDCSQFVQLQK 930
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco06g2159 930 Pfam Ubiquitin-conjugating enzyme 685 832 IPR000608 -
Acco06g2159 930 ProSiteProfiles Ubiquitin-conjugating (UBC) core domain profile. 681 841 IPR000608 -
Acco06g2159 930 SUPERFAMILY UBC-like 675 850 IPR016135 -
Acco06g2159 930 CDD UBCc 683 836 IPR000608 -
Acco06g2159 930 Gene3D Ubiquitin Conjugating Enzyme 644 922 IPR016135 -
Acco06g2159 930 FunFam Probable ubiquitin-conjugating enzyme E2 23 643 919 - -
Acco06g2159 930 PANTHER (E3-INDEPENDENT) E2 UBIQUITIN-CONJUGATING ENZYME 3 922 - -
Acco06g2159 930 SMART ubc_7 684 841 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco06g2159 Acco-ChrAcco06 16580154 16585160 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco06g2159 21 924 Miscellaneous Gene Families AT2G33770 50.384 0.0 890
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco06g2159 06 16580154 16585160 Acco06g2159 06 16580154 16585160 ECH