Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco06g1141 ATGATGTTGATCTGGGCACGATGCAAGAGATATGCAGAGCAGAGGCAGCCGGATTCATATACTAAAAGTGATATGCTAGCTTTGATTTCTGAATTCTCCAATTATGAAACGTGCTCTACAAGCTTGTCCTTCGCCTTACCCATTTTCTCCTCATCTCTCTTGTTCCCCTTCAATCCTATTCCGCATCATCATAGCGATAGATCTCAGATGGGTTATCTGTCTGCTGATATGGAATTTGTTGGCAAAGACTTCTTCACTGAGGCAAGCTACTGAAGGGTGTTTAAAGGGTCAAATGGAGGCTTTTTGGTGATTTCAATGAAGGAATTTTCAGCCATGTCTAGCTCTACTAAAGTTTTGGATCCTGCATTCCAGGCAGTGGGTCAGAAAGTAGGGACTGAAATATGGAGGATTGAGAATTTCCAGCCAGTTCCGTTGCCTAAATCTGAGTATGGAAAGTTCTACATGGGAGATTCGTACATTATTTTGCAGACAACACAAGGCAAAGGAGGCGCTTATTTCTATGATCTACACTTCTGGCTTGGAAAGGATACAAGTCAGGATGAGGTGGGGACAGCTGCCATCAAGGCTGTTGAACTTGATGCAGCTCTTGGAGGACGTGCAGTGCAGCATAGAGAAGTCCAAGGCCATGAATCTGACAAATTTTTGTCATACTTTAAACCATGTATAATACCACTAGAGGGAGGTGTTGCATCTGGGTTTACAAAACCTGAAGAAGAAGTGTTTGAAACACGCTTGTACATATGCAAAGGAAAACGAGTTGTCCCTTTTGCCCGGTCTTCTCTGAATCATGATGATGTATTTATCCTTGACACTCAGAATAAGATTTATCAATTCAATGGGGCAAATTCAAATATTCAAGAAAGAGCCAAGGCTTTGGAAGTAACCCAGTTTTTAAAGGAAAAATATCATGAGGGGAAATGTGACGTTGCAATTGTTGACGATGGAAAGTTGGACACAGAGTCAGATTCAGGTGAATTTTGGGTCCTCTTTGGTGGTTTTGCTCCCATTGGGAAGAAGGTCATTGGCGAGGATGATATTATTCCAGAGACTACTCCTGCTCAACTATACTGTATTGCTGATGGTGAGGTCAAACCTGTTGAAGGTGAACTGTCTAAATCACTGTTGGAGAATAACAAATTCTATTTACTGGACTGTGGTGCGGAGGTGTTTGTCTGGGTTGGCCGGGTAACACAAGTTGAAGAACGAAAAGCAGCATGCCAAGCCGCTGAGGAGTTTGTTGCAAGTCAAAATAGGCCGAAATCAACCCGGATAACCAGAGTTATTCAAGGCTATGAGACACATGCGTTCAAGTCCAACTTTGATACTTGGCCATCAGGATCTGCTACTCCTGGCGCTGAGGAAGGGAGAGGAAAAGTTGCAGCTTTGCTGAAGCAACAAGGTATGGGTGTCAAGGGGATGACAAAAAGCACACCAGTCAATGAAGAAGTTCCACCTCTGCTTGAAGGAGGTGGAAAGATGGAGGTATGGCTAATCAATGGAAGTGCCAAGAATCCTTTGCCTAAGGAGGATATTGGGAAATTTTACAGTGGAGATTGTTACATAGTACTGTACACTTACCACTCTGGTGAGAGGAAGGAAGACTATTTCTTGTGTTGTTGGTTTGGTAAAGATAGCATTGAGGAAGACCAAAGGATGGCTACTCGATTGGCCAATACTATGTCCAACTCACTAAAGGGTAGACCTGTTCAGGGCCGCATATTTGAAGGTAAAGAGCCACCACAATTTGTTGCTCTCTTTCAGCCTATGGTGGTCCTTAAGGGAGGTTTGAGTTCCGGTTACAAAAAATTAATAGCAGAGAAAAGTTTGCCAGATGAGACTTACACAGCAGAAAGTATTGCACTTATTCGAATTTCTGGAACTTCAATTCAAAATAATAAAGCAGTGCAAGTTGATGCAGTAGGAACATCATTAAATTCTACTGAGTGTTTCCTGCTGCAATCTGGTTCATCAGTTTTCACTTGGCATGGAAGTCAATGTTCTTTTGAACAGCAACAGCTAGCAGCTAAAATTGCTGAATTTTTAAAGCCAGGAGCTGCGATAAAACATGCCAAGGAAGGGACAGAAAGTTCAGCTTTTTGGTTTGCACTTGGAGGAAAACAGAGCTTCACCAGCAAAAAGGCCTCTAATGAAACTGTCAGAGATCCACATTTGTTCACATTTTCATTAAGCAAAGGGAAGTTTCAGGCAGAAGAGGTTTACAACTTTTCCCAAGATGATCTGTTGACAGAGGATATCCTTATACTTGACACGCATGCTGAAGTATTTGTTTGGGTTGGTCAGTCTGTGGATTCAAAAGAAAAACAAAATGTCTTTGAAATTGGGCAGAAATATATAGATAGAGCTGCAGCTCTGGAGGGACTCTCCCCTCATGTACCACTGTATAAAGTTACAGAAGGGAACGAACCTTGCTTTTTCACAACATACTTCTCATGGGATCATGCAAAAGCTACTACTCAAGGAAACTCGTTCCAGAAAAAGGTGTCATTACTTTTTGGGATTGGCCATGCTGTAGAGGATAAGTCCAATGGATCCAGTCAAGGAGGAGGGCCTAGACAAAGAGCAGAAGCTTTAGCTGCTTTATCTTCTGCATTTAATTCACCTTCTGAAAGAACATCCAGCACGGATAGAGATAGACTGAACGGAACAAATCAAGGAGGTCCAAGACAAAGAGCTGAAGCTTTAGCTGCATTGAACTCTGCATTTAATTCACCATCCACAGCTAGAACCGTTGCTCCCAGGCCTGCTGGAATAAGTCAAGGATCACAAAGAGCAGCTGCGGTAGCTGCTCTTTCAAACGTTCTTACTGCTGAGAAGAAGAAGCACTCACCTGATTCCTCTCCTGTTGGGCCAGTCAGCAGTCCTGTTGCAGAAAGTAGTGCTTCTGAAGCTAAAAGTGAAAGTGGCCATTCTGAAACAGAAGGTCCTGAAGAAGTTGTAGATGCTAAGGAGACTGAAGAACTTGCGACTGAAACTGGTAGCAATGAAGATTTAGAACCAAAACAGGAAAATGTTGAGGATGCGAATGATAATCAAAGTAGTCACAGTACGTTCAGTTATGATCAACTAAAGACCAAATCTAGTAATCCTGTTTCTGGAATAGATTTCAAACGAAGAGAGGCCTATCTGTCAGATGAAGACTTCAATACAGTATTTGGAATGACAAAAGAAGCATTCTATAAATTGCCAAAATGGAAGCAAGACATGCAGAAAAGAAAAGCTGATTTGTTTTAG 3273 0.4216 MMLIWARCKRYAEQRQPDSYTKSDMLALISEFSNYETCSTSLSFALPIFSSSLLFPFNPIPHHHSDRSQMGYLSADMEFVGKDFFTEASYXRVFKGSNGGFLVISMKEFSAMSSSTKVLDPAFQAVGQKVGTEIWRIENFQPVPLPKSEYGKFYMGDSYIILQTTQGKGGAYFYDLHFWLGKDTSQDEVGTAAIKAVELDAALGGRAVQHREVQGHESDKFLSYFKPCIIPLEGGVASGFTKPEEEVFETRLYICKGKRVVPFARSSLNHDDVFILDTQNKIYQFNGANSNIQERAKALEVTQFLKEKYHEGKCDVAIVDDGKLDTESDSGEFWVLFGGFAPIGKKVIGEDDIIPETTPAQLYCIADGEVKPVEGELSKSLLENNKFYLLDCGAEVFVWVGRVTQVEERKAACQAAEEFVASQNRPKSTRITRVIQGYETHAFKSNFDTWPSGSATPGAEEGRGKVAALLKQQGMGVKGMTKSTPVNEEVPPLLEGGGKMEVWLINGSAKNPLPKEDIGKFYSGDCYIVLYTYHSGERKEDYFLCCWFGKDSIEEDQRMATRLANTMSNSLKGRPVQGRIFEGKEPPQFVALFQPMVVLKGGLSSGYKKLIAEKSLPDETYTAESIALIRISGTSIQNNKAVQVDAVGTSLNSTECFLLQSGSSVFTWHGSQCSFEQQQLAAKIAEFLKPGAAIKHAKEGTESSAFWFALGGKQSFTSKKASNETVRDPHLFTFSLSKGKFQAEEVYNFSQDDLLTEDILILDTHAEVFVWVGQSVDSKEKQNVFEIGQKYIDRAAALEGLSPHVPLYKVTEGNEPCFFTTYFSWDHAKATTQGNSFQKKVSLLFGIGHAVEDKSNGSSQGGGPRQRAEALAALSSAFNSPSERTSSTDRDRLNGTNQGGPRQRAEALAALNSAFNSPSTARTVAPRPAGISQGSQRAAAVAALSNVLTAEKKKHSPDSSPVGPVSSPVAESSASEAKSESGHSETEGPEEVVDAKETEELATETGSNEDLEPKQENVEDANDNQSSHSTFSYDQLKTKSSNPVSGIDFKRREAYLSDEDFNTVFGMTKEAFYKLPKWKQDMQKRKADLF 1090
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco06g1141 1090 MobiDBLite consensus disorder prediction 950 1045 - -
Acco06g1141 1090 Gene3D Severin 244 351 IPR029006 -
Acco06g1141 1090 SMART VILL_6 498 596 IPR007122 GO:0051015
Acco06g1141 1090 SMART VILL_6 730 825 IPR007122 GO:0051015
Acco06g1141 1090 SMART VILL_6 250 340 IPR007122 GO:0051015
Acco06g1141 1090 SMART VILL_6 624 713 IPR007122 GO:0051015
Acco06g1141 1090 SMART VILL_6 357 450 IPR007122 GO:0051015
Acco06g1141 1090 SMART VILL_6 130 228 IPR007122 GO:0051015
Acco06g1141 1090 Gene3D Severin 352 460 IPR029006 -
Acco06g1141 1090 CDD gelsolin_S6_like 728 826 - -
Acco06g1141 1090 SUPERFAMILY Actin depolymerizing proteins 489 634 - -
Acco06g1141 1090 Gene3D Severin 494 628 IPR029006 -
Acco06g1141 1090 FunFam Villin-4 354 460 - -
Acco06g1141 1090 SMART VHP_1 1055 1090 IPR003128 GO:0003779|GO:0007010
Acco06g1141 1090 SUPERFAMILY Actin depolymerizing proteins 120 258 - -
Acco06g1141 1090 Gene3D Severin 116 243 IPR029006 -
Acco06g1141 1090 MobiDBLite consensus disorder prediction 978 1021 - -
Acco06g1141 1090 Gene3D Severin 719 842 IPR029006 -
Acco06g1141 1090 MobiDBLite consensus disorder prediction 960 977 - -
Acco06g1141 1090 FunFam Gelsolin 625 719 - -
Acco06g1141 1090 Pfam Villin headpiece domain 1055 1090 IPR003128 GO:0003779|GO:0007010
Acco06g1141 1090 SUPERFAMILY VHP, Villin headpiece domain 1024 1090 IPR036886 GO:0003779|GO:0007010
Acco06g1141 1090 CDD gelsolin_S5_like 625 715 - -
Acco06g1141 1090 SUPERFAMILY Actin depolymerizing proteins 329 451 - -
Acco06g1141 1090 Gene3D Villin headpiece domain 1014 1090 IPR036886 GO:0003779|GO:0007010
Acco06g1141 1090 SUPERFAMILY Actin depolymerizing proteins 702 824 - -
Acco06g1141 1090 CDD gelsolin_S2_like 249 338 - -
Acco06g1141 1090 SUPERFAMILY Actin depolymerizing proteins 241 343 - -
Acco06g1141 1090 FunFam Villin-like 1 720 841 - -
Acco06g1141 1090 CDD gelsolin_S4_like 492 593 - -
Acco06g1141 1090 SUPERFAMILY Actin depolymerizing proteins 617 719 - -
Acco06g1141 1090 PRINTS Gelsolin family signature 543 561 IPR007122 GO:0051015
Acco06g1141 1090 PRINTS Gelsolin family signature 639 659 IPR007122 GO:0051015
Acco06g1141 1090 PRINTS Gelsolin family signature 576 596 IPR007122 GO:0051015
Acco06g1141 1090 PRINTS Gelsolin family signature 751 773 IPR007122 GO:0051015
Acco06g1141 1090 PRINTS Gelsolin family signature 429 450 IPR007122 GO:0051015
Acco06g1141 1090 PRINTS Gelsolin family signature 517 533 IPR007122 GO:0051015
Acco06g1141 1090 PRINTS Gelsolin family signature 699 718 IPR007122 GO:0051015
Acco06g1141 1090 PRINTS Gelsolin family signature 780 799 IPR007122 GO:0051015
Acco06g1141 1090 Pfam Gelsolin repeat 140 222 IPR007123 -
Acco06g1141 1090 Pfam Gelsolin repeat 640 703 IPR007123 -
Acco06g1141 1090 Pfam Gelsolin repeat 260 323 IPR007123 -
Acco06g1141 1090 Pfam Gelsolin repeat 370 443 IPR007123 -
Acco06g1141 1090 Pfam Gelsolin repeat 511 589 IPR007123 -
Acco06g1141 1090 Pfam Gelsolin repeat 743 819 IPR007123 -
Acco06g1141 1090 ProSiteProfiles Headpiece (HP) domain profile. 1025 1090 IPR003128 GO:0003779|GO:0007010
Acco06g1141 1090 PANTHER VILLIN 108 1080 IPR007122 GO:0051015
Acco06g1141 1090 Gene3D Severin 629 718 IPR029006 -
Acco06g1141 1090 CDD gelsolin_S3_like 360 449 - -
Acco06g1141 1090 FunFam Gelsolin 117 242 - -
Acco06g1141 1090 MobiDBLite consensus disorder prediction 1022 1045 - -
Acco06g1141 1090 CDD gelsolin_S1_like 123 235 - -
Acco06g1141 1090 MobiDBLite consensus disorder prediction 853 932 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco06g1141 Acco-ChrAcco06 7812306 7826224 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco02g1123 02 8187891 8188682 Acco06g1141 06 7812306 7826224 CCT
Acco06g1141 06 7812306 7826224 Acco06g1141 06 7812306 7826224 ECH