Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco06g1047 ATGCTGACCGTGCTTCGCGTACACCTCCCCTCTGATATACCCATTGTAGGATGTGAGCTCACGCCGTATGTGCTTATACAGCGACCAGACAAGCTTGTCGCCAACGACGATGTCCCTGAGACGGCCCCCTTAGATGGCCATTTCTTGCGGTATAGGTGGTATCGTGTACAAAGTGATAAAAAGGTTGCTGTCTGTAGCATACATCCATCTGAACAGGCCACGCTGCAGTGTATTGGTTGTGTTAAGGCCAAAATACCTGTTACCAAAAGCTATCATTGCACACCAAAATGTTTTTCAGATGCATGGCAGCATCACCGTCTTTTACATGATCGTGCTGCAAGTGCAGTCAATGAAAATGGAACTGAAGAGGAGGAACTATTTGGACGCTATAATAGCACTGGTTTTGGGGCAGTTAATAACAGTTTATCTAGCTCTGCTTCAAGTGCTAGCCTGGCAAATGTGTCAGCTCCTCTGTATCCAGCTGCTATTACACAACGAAGTGGTGGCGAAACTTGGATTGAAGTTGGACGATCTAAAACGTATACCCCAACGGCAGATGATGTTGGTCATGTCCTTAAATTTGAGTGCGTTGTAGTTGATGCTGAGGCAAAAGCTCCTGTAGGGCATGCTAATACTATACTAACTTCTCGTGTTATTCCTGCTCCCTCTCCTATCCCACGCCGTTTGATTCCTGTTGATGGGATGGCACATATAGATGCAGATGCACGCTTAACATCTTCAGGAACATTTACTGTTCTATCTTACAACATTTTGTCTGATGCATATGCTTCAAATGATTTATATAGTTACTGTCCTCCATGGGCTCTTTCTTGGCCATACCGCAGGCAAAATTTGTTAAGAGAAATAGTTGGTTACCGGGCGGATATTATTTGTCTTCAGGAGGTACAAAGTGATCATTATGAGGATTTTTTTGCTCCTGAACTGGACAAACATGGTTATTATGGTCTATACAAGAGAAAAACCAATGAGGTATTTGGCAGCAACACCAACATCGTTGATGGTTGTGCAACATTTTTCCGTAGAGACAGATTTTCACATGTGAAGAAATATGAGGTTGAATTTAACAAGGCTGCCCAGTCTTTGACAGATGCGATGATTCCCACTGGCCAGAAGAAAGCTGCGTTAAATCGGCTGGTTAAGGACAATGTTGCTCTAATAGTGGTTCTAGAAGCAAAAGTTAACAATCAGCTAGTTGACAACCCTGGAAAAAGACAGCTTCTTTGTGTGGCAAATACACATGTGAATGTGCACCAAGATTTAAAAGATGTTAAACTCTGGCAGGTGCACACACTCTTGAAAGGGTTGGAGAAAATTGCTGCAAGTGCAGACATTCCGATGTTGGTTTGTGGAGATTTTAATTCGGTTCCTGGAAGTGCTCCACATTCACTTCTTGCATTGGGGAAGGTTGACCAAACACATCCAGATTTAGCAGTTGATCCACTTAATATATTGCGGCCACATAACAAGTTGGTTCATCAATTGCCACTGGTCAGTGCATACTCATCCTTTGGAAGGACGGCAGGTCTTGGATTTGAGCAGCACAGAAGGAGAGTGGATAGTGCAACAAATGAACCCTTGTTCACAAATGTCACCAGGGATTTTATCGGCACTCTTGATTACATATTTTATACAGCGGATTCATTGGTGGCGTTAACACTTGAAGATCTAAATACACAAAGAAAGGCTAAAAGAAGCATTTGGTTGATAAAGCTGCTTTAG 1740 0.4293 MLTVLRVHLPSDIPIVGCELTPYVLIQRPDKLVANDDVPETAPLDGHFLRYRWYRVQSDKKVAVCSIHPSEQATLQCIGCVKAKIPVTKSYHCTPKCFSDAWQHHRLLHDRAASAVNENGTEEEELFGRYNSTGFGAVNNSLSSSASSASLANVSAPLYPAAITQRSGGETWIEVGRSKTYTPTADDVGHVLKFECVVVDAEAKAPVGHANTILTSRVIPAPSPIPRRLIPVDGMAHIDADARLTSSGTFTVLSYNILSDAYASNDLYSYCPPWALSWPYRRQNLLREIVGYRADIICLQEVQSDHYEDFFAPELDKHGYYGLYKRKTNEVFGSNTNIVDGCATFFRRDRFSHVKKYEVEFNKAAQSLTDAMIPTGQKKAALNRLVKDNVALIVVLEAKVNNQLVDNPGKRQLLCVANTHVNVHQDLKDVKLWQVHTLLKGLEKIAASADIPMLVCGDFNSVPGSAPHSLLALGKVDQTHPDLAVDPLNILRPHNKLVHQLPLVSAYSSFGRTAGLGFEQHRRRVDSATNEPLFTNVTRDFIGTLDYIFYTADSLVALTLEDLNTQRKAKRSIWLIKLL 579
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco06g1047 579 CDD Deadenylase_CCR4 252 555 - -
Acco06g1047 579 FunFam Carbon catabolite repressor protein 4 1 219 574 - -
Acco06g1047 579 Gene3D Endonuclease/exonuclease/phosphatase 222 572 IPR036691 -
Acco06g1047 579 Pfam Endonuclease/Exonuclease/phosphatase family 253 561 IPR005135 GO:0003824
Acco06g1047 579 SUPERFAMILY DNase I-like 248 555 IPR036691 -
Acco06g1047 579 PANTHER CARBON CATABOLITE REPRESSOR PROTEIN 4 158 556 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco06g1047 Acco-ChrAcco06 7071440 7076835 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco02g1236 02 9188700 9193494 Acco06g1047 06 7071440 7076835 CCT
Acco06g1047 06 7071440 7076835 Acco06g1047 06 7071440 7076835 ECH