Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco06g0715 ATGGAGTCTCTGGCTACACTGCATCACTGTCGCCCACCTCTTCTCTTGTCACTCCATCATCTTCCTCCTTCACTGTCAACTCCTATGTCTTCCGTCTCCTTCAGGTCTCTACCACCCCGTGTTTCGCCGTCGCAACTCTCGTCTTCCTCTTTCAGATCATCGTCCATTAGAGCCGCATCATCGCCGTCAGAATCCTTCACTGACTCTGCTTTTCGTAGTCCTAGAACCACATTACCACGGTTGCTTCAAACCCTAAACTCCCTTTTCTTACCCGTCATCCGAACCTCCTGCACCGTCATAGCAGCGGCTGTGCTTTTCTACATGCGTCTTCACCACAAGCCCGCCATCGCAGCCCCGCTCGAGACGCCCACGGTGGAGTCGATGGATAATACTTCGAATGAAGAAAATCAAAGAGCTATTGATGAGAAATTGAGCAACAATCCCAATGATACCGACGCTCTTCGATCGCTCATCGAGGTAAAGGTGAGGGCGCGCAAAATTGAGGAAGCAATCCAGGTTATAGACCGTTTAATTGAGCTCGAACCGGAAGAGTTTGAGTGGCCATTGCTGAAGGCTCACATGTATGTTTACAATAGTGACTACGAATTAGCTAAAGAGAAGTTCGAAGAGGTTCTAACGAAAGATCCCTATCGTGTCGAGGCCTATCATGGCCTAGTAATGGCAACTTCGGAATCGGATAAGCCCTTGGAGGATTTGCTGAAGAGGGTTGAAGAAGCAGTGGAATTGTGCAAAAAGCAAAAGCGGGAATCGGAAGTCAGGGATTTGAGGCTTTTGATTGCGCAGATCAAAGTCATGGAGGGAGACCTTTCTGATGCTCTGAAGGCCTATCAGGAGCTTATAAAGGAAGAACCAAAGGATTTCAGGCCTTACTTATGTCAGGGTATCATATATACTCTTCTAAGAAAGAAAGATGAAGCTGAAAAACAATTTGACAAGTTCCGGAGGCTTATCCCTAAGAACCATCCTTACAGGGAGTATCTTGAGGATAATATGTTTGAAATGAATGTGATCTCACAGAAGGCAGGGAGAGAGGGAGCGGGTGCAAAGAACTGA 1074 0.4721 MESLATLHHCRPPLLLSLHHLPPSLSTPMSSVSFRSLPPRVSPSQLSSSSFRSSSIRAASSPSESFTDSAFRSPRTTLPRLLQTLNSLFLPVIRTSCTVIAAAVLFYMRLHHKPAIAAPLETPTVESMDNTSNEENQRAIDEKLSNNPNDTDALRSLIEVKVRARKIEEAIQVIDRLIELEPEEFEWPLLKAHMYVYNSDYELAKEKFEEVLTKDPYRVEAYHGLVMATSESDKPLEDLLKRVEEAVELCKKQKRESEVRDLRLLIAQIKVMEGDLSDALKAYQELIKEEPKDFRPYLCQGIIYTLLRKKDEAEKQFDKFRRLIPKNHPYREYLEDNMFEMNVISQKAGREGAGAKN 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco06g0715 357 Pfam Tetratricopeptide repeat 263 292 IPR019734 GO:0005515
Acco06g0715 357 Coils Coil 236 260 - -
Acco06g0715 357 SMART tpr_5 260 293 IPR019734 GO:0005515
Acco06g0715 357 SMART tpr_5 151 184 IPR019734 GO:0005515
Acco06g0715 357 SMART tpr_5 185 218 IPR019734 GO:0005515
Acco06g0715 357 SMART tpr_5 294 327 IPR019734 GO:0005515
Acco06g0715 357 Gene3D Tetratricopeptide repeat domain 102 350 IPR011990 GO:0005515
Acco06g0715 357 Coils Coil 269 289 - -
Acco06g0715 357 ProSiteProfiles TPR repeat profile. 151 184 IPR019734 GO:0005515
Acco06g0715 357 PANTHER TETRATRICOPEPTIDE REPEAT PROTEIN 5 26 331 - -
Acco06g0715 357 ProSiteProfiles TPR repeat profile. 260 293 IPR019734 GO:0005515
Acco06g0715 357 SUPERFAMILY TPR-like 144 329 IPR011990 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco06g0715 Acco-ChrAcco06 4732507 4733580 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco02g1628 02 12453071 12456349 Acco06g0715 06 4732507 4733580 CCT
Acco06g0715 06 4732507 4733580 Acco06g0715 06 4732507 4733580 ECH