Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco06g0407 ATGGCTTATCCAAATAAGTTCTTCATTGGAGGGGTATGGGCCTTCACCAATGAAAGAGGTGAGAGTGCGGGGCATTCTCATCAATGGCGGAGGTGGCAGGTTCACAGTCGTCGTTGTTTGGACAGTCAAACAATGACTTTCTTCGTCTTGCTCTTTCTCGTTTCCCTCTTTTCTTCTTCTCACGCCTTCCCTCCCCACAGCCACCACCGTCGCTTTGCCTCTCACAATTACAGAGATGCCCTCTCCAAATCCATCCTCTTCTTTGAAGGACAGAGGTCCGGCAAACTCCCTTCTAACCAGAGGATGACTTGGAGGGGAGACTCTGCTCTCTCAGACGGCTCTGCAATGCATGTTGATTTAGCGGGAGGGTACTACGATGCAGGGGACAATGTGAAGTTTGGCTTTCCCATGGCATTCACAGTCACTATGCTTTCCTGGAGTGTTATTGAGTTTGGTGGACAGATGAAAGGTGAAGTGCAGAATGCTAGAGAAGCCATTCGTTGGGGTACGGATTATCTACTAAAGGCTACTCAACATCCAGACGTCATTTACGTTCAGGTGGCAGATGCCAGAAGTGATCACGTTTGTTGGGAGAGACCGGAGGACATGGATACCCCAAGAAATGTGTACAAGATTGATAAGAACAACCCTGGTTCAGATGTGGCCGCTGAAACTGCAGCCGCTCTAGCTGCTGCTTCTGTGGTTTTCAAGAAATGTGACCCCGCCTACTCCAAAACTCTAGTCACCAGAGCTACAAGGGTGTTTGAGTTTGCTGATAAATACAAGGGAGCTTACAGTGATGGGCTGAAGCCCATTGTATGCCCTTTCTATTGCTCTTATTCTGGTTATCAGGATGAGCTGTTATGGGGTGCTGCGTGGCTGCACAAGGCTACTGGGAAGCCCATGTACCTAAACTATATTCAAGTGAATGGACCCACCCTTGGGGCTGCGGAGTTTGATAATATGTTTGGGTGGGATAACAAGCATGTTGGAGCAAGGATACTGCTTTCCAAGGAATTCCTTGTTCAGAAAGTACAATCGCTCCATGAGTTCAAGGCTCTTGCGGACAATTTCATATGTTCCATAATTCCTGGGACCTCTTCCTCTTCTTCCCAATATACCCCAGGGGGGCTTCTGTTCAAGATGAGTGATAACAACATGCAGTATGTGACGTCCACTTCCTTCCTGCTCCTAACCTACGCCAAGTACCTGACCTCAGCCCACATGTCTGTCAGCTGTGGTGGAGCCACTGTCACCCCCAAGACTCTTCGCACTATGGCCAAAAAACAGGTTGATTACATGCTGGGAGATAACCCCTTGAAGATGTCCTACATGGTGGGGTATGGTCCAAATTATCCGCGAAGGATACACCACAGGGGATCATCTCTGCCGTCCATTGCAGTGCACCCCGCCAAGATCCAATGCTCTGCAGGCTTCGGCGCTTTGAGCTCACAGAGCCCGAATCCCAACGTACTAGTGGGAGCGGTGGTTGGTGGGCCAGACTTGCACGATAGGTTTCCGGATGAACGGTCAGATTATGCGCAGTCGGAGCCAGCCACGTACACGAACGCCCCTCTTGTAGGCGCCCTGGCTTATCTCGCGCACTCATTGGGCCAACTCTAA 1623 0.5015 MAYPNKFFIGGVWAFTNERGESAGHSHQWRRWQVHSRRCLDSQTMTFFVLLFLVSLFSSSHAFPPHSHHRRFASHNYRDALSKSILFFEGQRSGKLPSNQRMTWRGDSALSDGSAMHVDLAGGYYDAGDNVKFGFPMAFTVTMLSWSVIEFGGQMKGEVQNAREAIRWGTDYLLKATQHPDVIYVQVADARSDHVCWERPEDMDTPRNVYKIDKNNPGSDVAAETAAALAAASVVFKKCDPAYSKTLVTRATRVFEFADKYKGAYSDGLKPIVCPFYCSYSGYQDELLWGAAWLHKATGKPMYLNYIQVNGPTLGAAEFDNMFGWDNKHVGARILLSKEFLVQKVQSLHEFKALADNFICSIIPGTSSSSSQYTPGGLLFKMSDNNMQYVTSTSFLLLTYAKYLTSAHMSVSCGGATVTPKTLRTMAKKQVDYMLGDNPLKMSYMVGYGPNYPRRIHHRGSSLPSIAVHPAKIQCSAGFGALSSQSPNPNVLVGAVVGGPDLHDRFPDERSDYAQSEPATYTNAPLVGALAYLAHSLGQL 540
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco06g0407 540 PANTHER ENDO-1,4-BETA-GLUCANASE 49 535 - -
Acco06g0407 540 ProSitePatterns Glycosyl hydrolases family 9 (GH9) active site signature 2. 433 459 IPR018221 -
Acco06g0407 540 FunFam Endoglucanase 73 538 - -
Acco06g0407 540 Pfam Glycosyl hydrolase family 9 77 530 IPR001701 GO:0004553|GO:0005975
Acco06g0407 540 SUPERFAMILY Six-hairpin glycosidases 74 537 IPR008928 GO:0005975
Acco06g0407 540 Gene3D - 72 540 IPR012341 GO:0005975
Acco06g0407 540 ProSitePatterns Glycosyl hydrolases family 9 (GH9) active site signature 3. 506 524 IPR033126 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco06g0407 Acco-ChrAcco06 2536391 2539756 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco06g0407 42 536 Glycoside Hydrolase AT1G02800 74.395 0.0 750
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco02g0468 02 3365981 3368098 Acco06g0407 06 2536391 2539756 CCT
Acco06g0407 06 2536391 2539756 Acco06g0407 06 2536391 2539756 ECH