Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco06g0273 ATGGCGAAGCCTCCTCCTTCTTTCTTCCTCCTCCTTCTCTGCTCTTCCGGACTCATGCTGCTGCTCATCTTCTCCGATCTCCACTCTACAACCCCACCGGCCACCGACATCTTCCTCTCTCGCATTCCCATGTTGGCCAAGATCCTCCCCAGAAGAACTTTAGGTGACACCACTGTCATCACTGTACCTTCCAGCAGCCCTGTTACTGTGTACCCCACCAATCCATCTGCTGTGCCCGTTACTGTACCTTCCTCCAATTCCCCCGTACCCGTTTCCTCTTACCCTCCCCCGTCTCCGTCATCCACCGGTGTTCCGGCCACCAATTCTCAACCACCACCTCCTCAAACTCCTCAAACGCCAACTAATGCTGCTCCCGCCGTTTCAGGGCAGAAGTGGTGTGTTGCTAAATCTGGAGTTTCACAATCTGTTCTTCAATCCGCACTTGACTATGCTTGTGGAATGGGAGGCGCCGATTGCTCTCAGATACAGCAGGGTGGGAGTTGCTACAATCCCGACAATCTGCAAAATCATGCCTCTTATGCCTTCAACTCCTACTACCAAAAGAAACCTGCTCCAACCAGCTGTGACTTCGGAGGCGCTGCCTCCTTAGTTACCACCAACCCTAGTACGGGTTCTTGCATTTACCCAGCGTCGTCGTCGTCGTCGTCGCCGCCAACAACTCCGACGCCATCATCCCCAACTACTCCATCGTCTTCTTCTTCGCCGTCGCCACCGAAATCTGTTTCATCACCGACAAAATCTCCAACTCCGACAACACCATCATCACCAGGAGAAGGTACTTTTGGCTTCGGTAACCCGACATCATCATCGTCGGCGCCGTTGAATTCGAGCAATCCAACGTCAGGTTATATGCCACTTGTGGGATCGCAACCCCCACCTTCCACGTCATGGTCAAATTCAAGTGGCCTCAGACCTTTGGTTGCCTCCACGCTTCTGCTGATATCGCTGGTCACTGCGAAACTCAACATGTGCACTTAG 999 0.5315 MAKPPPSFFLLLLCSSGLMLLLIFSDLHSTTPPATDIFLSRIPMLAKILPRRTLGDTTVITVPSSSPVTVYPTNPSAVPVTVPSSNSPVPVSSYPPPSPSSTGVPATNSQPPPPQTPQTPTNAAPAVSGQKWCVAKSGVSQSVLQSALDYACGMGGADCSQIQQGGSCYNPDNLQNHASYAFNSYYQKKPAPTSCDFGGAASLVTTNPSTGSCIYPASSSSSSPPTTPTPSSPTTPSSSSSPSPPKSVSSPTKSPTPTTPSSPGEGTFGFGNPTSSSSAPLNSSNPTSGYMPLVGSQPPPSTSWSNSSGLRPLVASTLLLISLVTAKLNMCT 332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco06g0273 332 MobiDBLite consensus disorder prediction 80 125 - -
Acco06g0273 332 PRINTS Proline rich extensin signature 224 249 - -
Acco06g0273 332 PRINTS Proline rich extensin signature 88 100 - -
Acco06g0273 332 PRINTS Proline rich extensin signature 105 126 - -
Acco06g0273 332 PRINTS Proline rich extensin signature 67 83 - -
Acco06g0273 332 MobiDBLite consensus disorder prediction 215 308 - -
Acco06g0273 332 MobiDBLite consensus disorder prediction 89 120 - -
Acco06g0273 332 PANTHER BETA-1,3 GLUCANASE 47 233 IPR044788 -
Acco06g0273 332 SMART X8_cls 131 215 IPR012946 -
Acco06g0273 332 MobiDBLite consensus disorder prediction 226 240 - -
Acco06g0273 332 Gene3D - 126 224 - -
Acco06g0273 332 FunFam Glucan endo-1,3-beta-glucosidase 4 126 219 - -
Acco06g0273 332 MobiDBLite consensus disorder prediction 241 308 - -
Acco06g0273 332 Pfam X8 domain 131 202 IPR012946 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco06g0273 Acco-ChrAcco06 1726541 1727815 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco06g0273 128 216 Glycoside Hydrolase AT4G26830 55.556 1.63e-28 113
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco02g0292 02 2160178 2162609 Acco06g0273 06 1726541 1727815 CCT
Acco06g0273 06 1726541 1727815 Acco06g0273 06 1726541 1727815 ECH