Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco06g0262 ATGGCTCCTGATATCACCACCGCCGTAACTAACGCCACCGCCACCCAGGCAAAGGCCTCCGGGGACCGTGCCTTCGTGACTTTCCTCGCTGGCAATGGTGACTACGTGAAGGGAGTGGTGGGACTGGCCAAGGGTCTGAGAAAGGTGAAGAGCAAGTATCCTTTGGTGGTTGCTATTCTGCCAGATGTTCCCCAGGAGCACCGTCAGATCCTAATCTCTCAAGGCTGCATCGTCCGACAGATCGAGCCGGTCCACCCGCCTGAGAACCAAACCCAGTTCGCCATGGCTTATTATGTCATCAATTACTCCAAGCTTCGTATCTGGGAGTTCGTGGAGTACAAGAAGATGATCTATCTTGATGGAGACATCCAGGTGTTTGACAACATAGACCACCTTTTTGATCTGCCAAACGGCTACTTCTACGCCGTGATGGACTGTTTCTGCGAGAAAACTTGGAGCCACACCCCACAGTACAAGATCGGCTACTGCCAGCAGTGCCCTGATAAGGTTCGGTGGCAAGCTGAGTTGGGACCCAAGCCTCCACTGTACTTCAACGCTGGCATGTTTGTTTACGAGCCTAATCTGTCCACCTACCATGACCTCCTCAAAACCCTTCAAGTCACTGAGCCTACTTCCTTCGCTGAGCAGGACTTCCTGAACATGTACTTCAAGGAAATATATAAGCCCATACCCAACGTTTACAACCTTGTGCTGGCCATGCTATGGCGTCACCCCGAGAACGTTGAGCTTCACAAAGTGAAAGTAGTTCACTATTGTGCTGCTGGGTCAAAGCCATGGAGATACACAGGGAAAGAGGAAAACATGGACAGGGAAGACATAAAGATGCTGGTGAAGAAGTGGCGGGACATATACGAGGATGAGACGTTAGACTATGTGAACCCAGTGAATGTGGGGCGTATTCAGGAGGCACTATCCGAGGCTGGTCGGGTTGCATTCGTACCCGCCCCATCTGCCGCTTAG 981 0.5178 MAPDITTAVTNATATQAKASGDRAFVTFLAGNGDYVKGVVGLAKGLRKVKSKYPLVVAILPDVPQEHRQILISQGCIVRQIEPVHPPENQTQFAMAYYVINYSKLRIWEFVEYKKMIYLDGDIQVFDNIDHLFDLPNGYFYAVMDCFCEKTWSHTPQYKIGYCQQCPDKVRWQAELGPKPPLYFNAGMFVYEPNLSTYHDLLKTLQVTEPTSFAEQDFLNMYFKEIYKPIPNVYNLVLAMLWRHPENVELHKVKVVHYCAAGSKPWRYTGKEENMDREDIKMLVKKWRDIYEDETLDYVNPVNVGRIQEALSEAGRVAFVPAPSAA 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco06g0262 326 Pfam Glycosyl transferase family 8 27 269 IPR002495 GO:0016757
Acco06g0262 326 SUPERFAMILY Nucleotide-diphospho-sugar transferases 26 297 IPR029044 -
Acco06g0262 326 PANTHER GLYCOGENIN SUBFAMILY MEMBER 15 293 - -
Acco06g0262 326 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 21 300 IPR029044 -
Acco06g0262 326 CDD GT8_Glycogenin 23 293 - -
Acco06g0262 326 FunFam Hexosyltransferase 21 299 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco06g0262 Acco-ChrAcco06 1668357 1669656 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco06g0262 1 326 Glycosyltransferase AT1G56600 76.786 0.0 538
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco02g0280 02 2076552 2077922 Acco06g0262 06 1668357 1669656 CCT
Acco06g0262 06 1668357 1669656 Acco06g0262 06 1668357 1669656 ECH
Acco02g0392 02 2878715 2880163 Acco06g0262 06 1668357 1669656 ECH