Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco05g2844 ATGGCGAAATCGAGCGCAGAAGATGCTGAACTACGTCGAGCTTGCCAGGCTGCAGTTGATCATGAAGACCACAAACACAAGGTGGTTATGTCAATTCGTGTTGCCAAGAGTCGTGGAATCTGGGGAAAATCCGGCATGCTCGGCGTCGGCGGCCGTCAGGGAATGGCCAAGCCCAGGGTTCTCGCTCTCTGCCTCAAAGCGAAAGGTCAGAGGACAAAAGCTTTTCTTCGAGTCTTAAAGTACTCCAATGGAGGAGTTCTTGAGTGTGCAAAAACATACAAGTTGAAACACCTCTCAAAGATGGAACTTGTAACAGCTGACCCCAGTGGATGTACGTTTACGCTGGCATTTGATAATAACATCAGAAGCCATAGTGGGGCTCCAGCTCAGTGGACAATGCGCAATGTTGATGACAGGAACCGCATCCTAATCCATATCTTAAATACATGCAAAGATGTACTGGCTCGCCTTCCTAAAGTTGTTGGTTTAGATATTGTGGAGATGGCTATCTGGGCTAAGGAGAACACACCCGCAGTTGCTGCACAAGCCCAAGCTCATGCAAACCCAGAAGATGGTGGTCCTGTTGAATATGATGCGGCTGAGACAGAACTGAAAGTCAATGTAGAGAAGGAACTTGTTTCTCAGGCAGAAGAAGAGGACGTGAAGGTCCTTCTCGAAACTTATGCCATGATGGGTACTGGCGAAGCAGAGGCGTTTTCTGAAAGGCTGAAGAGAGAGCTTCAGGCTCTGGAAGCAGCAAATGTGCATGCCCTCTTAGAAAGTGAACCTCTGGTGGATGAGGTTTTGCAAGGGCTTGAAGCAGCGGCAAATTGTGTGGAAGACATGGATGAATGGTTGTGCATTTTCAATGTCAAATTAAGGCACATGAGGGAGGATATTGAATCAGTAGGGACTTTTACATTTCATATAGAAACACGCAACAACAAGTTGGAAATGCAATCAGCAAACAACAAAGTTCTTATTGAGGAAGTTGATAAGCTTCTTGAGAATTTGCATGTCCCTCCTGAGCTTGCAGCTAGTCTGACAGGAGGTTCATTTGATGAGGCGCGTGTGCATCGGACTGTGGAAGCATGTGAGAGGCTGGTGGATGTCTTGCCTAGGCTCCAAGTGCCGAACATAGATCCTTCATTTGCAAACATGAGGGCTGTTAGAGACAGGCGTGCAGAACTTGAAAACTTAAAAAGTACTTTTGTCAAGAGAGCTTCTGATTTCTTAACAAATTATTTTGAAACTTATGTGGATTTCATGATTCATGATACATACAATTCCCAGAAAGGACGGTTGAAGAAGCCTGATCGTGCTGAGTTACGGTGCAGATATAGGACATATCCCCGCCTTTTGCAACTTTTAAAGTCTCTTGATAAAAACTGCTTATATACATTGAGGAAAGCTTACTGCCGTTCTCTCAACTTGCTTCTCAGAAATGAGGCCCGTGAGTTTTCGGATGAACTTCGTGCTAACACTAAAGCACCTAAAAACCCAACTGTTTGGCTTGAAGGTATCATAGGTTTAGGTCAGAATGCAAACACGGTTGACACTTCTTCACTTTCTGAGGCTTATGAAAAGATGCTTGCAGTTTTTGTCCCACTTCTTGTGGATGAGAGCTCTTTTTTTGCCGCCTTCATGTGTTTCGAAGTTCCCACAGTGACTCCTCTTCCTCCAGGAGGCACTATTAATGGTGATGAAGATGGATATGATGACGATGATTCTGAAGCCAACGATGATGATTTGGGGATTATGAACATTGACGAGAATGATAGCAAATCCGGTGCTTGCATTGATGCTGCGGAGCTTGCATCTTTAAATGAGTTCCTTCAGGATATGCTTGATGGAATCCAGGAAGATTTCTATGTTATAGTAGATTGGGCATACAAAATTGATCCCTTGCGCTGCATATCAATGCACGGAATAACAGAGCGCTTCCTCTCTGATCAGAAAGCTGATGCAGCAGGATTTGTTAGCCTTGTGCTTGGTGACCTAGAGTCTTACATATCCATGCAGTTCACTCGTTTTGTAGATGAAGCTTGCCATCAGATTGAAAGATATGAGCGCACTGGGCGCCAAACGGGTATCTTGGGTTATATTCCCAGCTATAAAGATGGTTTCTCCCACTTACGAATCCAAAAGATTCCTTACCAGGTCGGGATGTCAAAAGGGGATCTTAGGAAGGTTATAAAAATCAGCTTAACAGGGATTGATAGGTGTTTCTATGCCATGCATAAGAAACTACAGAAGAACTTGACTTCAGAGGAGCTGTTGCCTTCCTTGTGGGATACATGCAAGAGGGAATTTGTGAATAAGTATCAAATTTTTGTTCAGCTCGTCGCCAGGACCCACCCGTTGGAAAAAATACCTTCTGTAGATGAAATCAAAGACATTTTAGCTGGACTTTAA 2415 0.4427 MAKSSAEDAELRRACQAAVDHEDHKHKVVMSIRVAKSRGIWGKSGMLGVGGRQGMAKPRVLALCLKAKGQRTKAFLRVLKYSNGGVLECAKTYKLKHLSKMELVTADPSGCTFTLAFDNNIRSHSGAPAQWTMRNVDDRNRILIHILNTCKDVLARLPKVVGLDIVEMAIWAKENTPAVAAQAQAHANPEDGGPVEYDAAETELKVNVEKELVSQAEEEDVKVLLETYAMMGTGEAEAFSERLKRELQALEAANVHALLESEPLVDEVLQGLEAAANCVEDMDEWLCIFNVKLRHMREDIESVGTFTFHIETRNNKLEMQSANNKVLIEEVDKLLENLHVPPELAASLTGGSFDEARVHRTVEACERLVDVLPRLQVPNIDPSFANMRAVRDRRAELENLKSTFVKRASDFLTNYFETYVDFMIHDTYNSQKGRLKKPDRAELRCRYRTYPRLLQLLKSLDKNCLYTLRKAYCRSLNLLLRNEAREFSDELRANTKAPKNPTVWLEGIIGLGQNANTVDTSSLSEAYEKMLAVFVPLLVDESSFFAAFMCFEVPTVTPLPPGGTINGDEDGYDDDDSEANDDDLGIMNIDENDSKSGACIDAAELASLNEFLQDMLDGIQEDFYVIVDWAYKIDPLRCISMHGITERFLSDQKADAAGFVSLVLGDLESYISMQFTRFVDEACHQIERYERTGRQTGILGYIPSYKDGFSHLRIQKIPYQVGMSKGDLRKVIKISLTGIDRCFYAMHKKLQKNLTSEELLPSLWDTCKREFVNKYQIFVQLVARTHPLEKIPSVDEIKDILAGL 804
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco05g2844 804 MobiDBLite consensus disorder prediction 560 580 - -
Acco05g2844 804 PANTHER SEC3/SYNTAXIN-RELATED 713 797 - -
Acco05g2844 804 Coils Coil 240 260 - -
Acco05g2844 804 Coils Coil 317 337 - -
Acco05g2844 804 SMART Sec3_PIP2_bind_2 54 153 IPR028258 -
Acco05g2844 804 Pfam Exocyst complex component Sec3 606 702 IPR019160 GO:0000145|GO:0006887
Acco05g2844 804 Pfam Exocyst complex component Sec3 236 496 IPR019160 GO:0000145|GO:0006887
Acco05g2844 804 Pfam Exocyst complex component SEC3 N-terminal PIP2 binding PH 56 151 IPR028258 -
Acco05g2844 804 Coils Coil 199 219 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco05g2844 Acco-ChrAcco05 43451278 43460351 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco05g2844 715 804 EF-hand Containing Proteins AT1G47550 57.778 8.20e-29 121
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco05g2844 05 43451278 43460351 Acco05g2844 05 43451278 43460351 ECH