Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco05g2805 ATGTCAGGTATAGATGCCACTGATTCGACCCTCCCTGACTCGGCTGAGCAGGTTTATATCTCGTCGTTGGCCCTTCTCAAAATGCTTAAACACGGAAGGGCTGGTGTTCCAATGGAGGTGATGGGCTTGATGTTGGGAGAGTTTGTGGGTGATTACACTGTCCGCGTCGTAGATGTTTTTGCGATGCCACAGAGTGGTACCGGCGTTAGTGTTGAAGCCGTAGATCATTTTTTTCAGACGCACATGCACGAAATGCTGAAACAGACTGGAAGACCAGAGATCGTTGTGGGGTGGTATCATTCCCATCCTGGATTTGGCTGTTGGCTTTCTGCGGTGGATATAAATACACAACAGAGTTTTGAGGCTTTAAATCAACGGGCTGTGGCTGTGGTGGTAGATCCTATTCAGAGTGTTAAAGGCAAGGTGGTGATTGACGCTTTTAGGCTTATCAATCCAGAAAATATGTTGGTGGGTCAGGAACCACGACAAACAACATCTAACATTGGTCACCTTAATAAGCCATCTATACAAGCTTTGATCCATGGCTTGAACCGACATTATTATTCCATGGCAATCAGTTACAGAAAAAATGAGTTTGAAGAGAAGATGTTGCTTAACCTTCAGAAGAAGAAATGGACCGATGTTTTGACACTCAGGCATTTTGATTCACATTCCAAGACTAATGAACAGACAGTCCAGGAGATGCTGAATTTAGCGGTCAAGTACAACAAGGCCGTGCAAGAGGAGGATGAGCTCCCGCCAGAAAAGCTTGCAGTTGCTAAGGTGGGAAGGCAAGATGCTAAGAAGCACCTTGAAGAGCACGTTTCCAATTTGATGTCTTCCAACATTGTTCAGACTTTGGGAATGATGCTAGATTCTGTTATCACAACGGTTTACTCGCGAACAAAGTTGTGCCTGGTTGAAACGTCAAAATTCATTACTGCAACTTAA 951 0.4458 MSGIDATDSTLPDSAEQVYISSLALLKMLKHGRAGVPMEVMGLMLGEFVGDYTVRVVDVFAMPQSGTGVSVEAVDHFFQTHMHEMLKQTGRPEIVVGWYHSHPGFGCWLSAVDINTQQSFEALNQRAVAVVVDPIQSVKGKVVIDAFRLINPENMLVGQEPRQTTSNIGHLNKPSIQALIHGLNRHYYSMAISYRKNEFEEKMLLNLQKKKWTDVLTLRHFDSHSKTNEQTVQEMLNLAVKYNKAVQEEDELPPEKLAVAKVGRQDAKKHLEEHVSNLMSSNIVQTLGMMLDSVITTVYSRTKLCLVETSKFITAT 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco05g2805 316 Pfam JAB1/Mov34/MPN/PAD-1 ubiquitin protease 14 125 IPR000555 GO:0005515|GO:0008233|GO:0008237
Acco05g2805 316 SUPERFAMILY JAB1/MPN domain 18 154 - -
Acco05g2805 316 CDD MPN_RPN11_CSN5 8 273 - -
Acco05g2805 316 Gene3D Cytidine Deaminase, domain 2 5 221 - -
Acco05g2805 316 FunFam 26S proteasome non-ATPase regulatory subunit 7 221 - -
Acco05g2805 316 Pfam Maintenance of mitochondrial structure and function 160 287 IPR024969 -
Acco05g2805 316 ProSiteProfiles MPN domain profile. 18 153 IPR037518 -
Acco05g2805 316 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 -RELATED 14 294 - -
Acco05g2805 316 SMART pad1_6 17 152 IPR000555 GO:0005515|GO:0008233|GO:0008237
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco05g2805 Acco-ChrAcco05 43164246 43167166 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco05g2805 05 43164246 43167166 Acco05g2805 05 43164246 43167166 ECH