Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco05g2743 ATGATAAAACCGAATCATAGAGCCAAAACCAAAGGCCAAAGCGGAGACCAGAGAGCACTCACTGGGAGAGATCCCTTCTCTCTCTCTCTCTCTCTCTGCCCCCTCTTCCCAATCCCACATCCTTTGCGCCAATCAACGACCCCACAATCAAATTTCCCTCCTTCCCTTAAACCTCTCCTTCTTACCATGCCAGCTTCCCCTTCTGACAACCGAAACAAATGGCGGAAGCGCAAAAGAGAACCCCAAATCAGCCGGCGGCAACAGAAGCATGAGGAGGAAGACGAGGACGACGAAGACCCCAATGGCGAGGACGACCAACTCGAGCGACAGGATGATTCCGAGGACCAAACCCAACACCCTAATCCCCAATCTGGTTCTAATTCTCAACCGCAGCTCGAGATCGAGGTTTTGTCCGACGATGGAGTCCAAATTTCTCAGTTCCCTAGAGTGATCAAGCGCACTGTCAATCGCCCTCACGCATCTGTCACGGCAATTGTTGCTCTGGAGCGTGCCAATGAGTCTGGAGACAACAAGGGTCAGTTCCAGAATTCTCCATTTTTGGAGAATGTGTCGCACGGGCAGCTTCAGGCGCTTTCCACCGTGCCGGCTGATAGTTCAGCTTTGGATCAGGACCGTAATTCGTCTTATGTGATCACCCCACCTCCCGTATTGGAAGGCCGTGGTGTTGTCAAGCGTTTTGGGAGTAGGGTTCTGGTAGTTCCAATGCACTCAGAATGGTTTTCACCAGCTACAGTTCATCGGCTCGAGAGACAAGTGGTGCCACGTTTTTTCTCTGGAAAATCACCAGATCATACCCCTGAGAAGTACATGGAATGTAGAAATCATATAGTTGCAAGATACATGGAAGACCTGGGGAAGAGGATTACAATTTCTGATTGCCAAGGATTGTTAGTCAGGGTTGATAATGAAGATTTAACTCGAATTTTCCGGTTCCTTGATCATTGGGGAATCATCAACTACTGTTCTCAGGTACCAAGTCACGAGCCTCGGAATGACGAGTGTTACCTGAAGGATGAGGCAAGTGGTGAGATTCGTGTGCCATTAGCTGCCTTAAAATCTATAGATGGTTTGATCAAATTTGACAGGCCGAAGTGTAAACTCAAAGGAGATGAAGTTTATTCATCATTGACAACTCAGAATGCTGATATTTCTGATTTGGAGGAAAGAATAAGAGAGCATCTATCTGAAAATCATTGCAATTGTTGTTCTCGTCCTCTTCCTGCAGTTTTCTATCAGTCACAAAAAGAGGCTGATATTCTTCTCTGCATTGATTGTTTCCATGATGGGAGATTTGTCGCTGGTCATTCAAGTATAGATTTTATAAGAGTTGATTCAACAAGAGATTATGGTGATCTAGATGGGGATAGTTGGACTGATCAAGAAACCTTGCTGCTGCTTGAGGCAATGGAGATTTACAATGAGAATTGGAATGAAATTGCTGAGCATGTTGGTACCAAGTCAAAAGCACAATGTATCCTCCATTTTCTCCGTCTACCCATGGAAGATGGAAAATTGGAAAATATCAATGTTCCAAGAATGTCATTGTCATCAAATATCTCAAATGGTGTTGATTGTGAACGACCACATTCAAATTTAGATGCAGATTTTGCAGGACTGACTCCGAGCATTGATCCCAACAGCAGGCTCCCTTTTTCAAATTCTGAAAATCCTGTTATGGCTCTGGTTGCGTTTTTGGCCTCTGCTATCGGACCAAGAGTAGCTGCTGCTTGTGCACATGCAGCATTAGCAGAATTGTCGGAGATTAATTCTGGCAGTATGTCACAGAAAGAAGCACCAGGGCAAAGTAACAGGATGAACTTGGAAAGCACACATAGTAAAGATGGCAGTCTTCCTGGAGAAATTGCGAGCTCAAATCAGCAAGATGAGGACGAGACAAAAGCCCTTGGTTCACATGGTCCAAATGAGGGTGAGGCCATCCCTCTATCTGCTGAGAAAGTTAAAGATGCTGCTAAGGCAGGCTTGTCTGCTGCAGCAATGAAAGCTAAACTGTTTGCAGATCATGAAGAAAGAGAAATTCAGAGGCATTGTGCTAATATTATAACGCATCAGCTGAAAAGATTGGAATTGAAGCTCAAGCAGTTTGCTGAAATTGAAACGCAGTTGATGAAAGAATGTGACCAAATGGAGAAGACAAGACAAAGGCTTGCCGCAGAACGTTCCCGTCTTTTATCAGCATGGCTTGGGTCTGGTGTAGCCACAAACACACCCGGTGTTGGTCCTTCTACTGTCAGCAACAATAATGGCAACAGTAGACCACAGATGGCCTTTGGATCTTCTTTGCAGCCTAGTGTCTCAGGGTACCCAAGTGGCCAACCAGTTCATCCACACATGTCCTTTGTCCCACAGCCTTCCATGTTTGGTGGGTTAGGGCAAAGGTTACCACTTTCTATGATACAACAACCACAATCAACTTCTACAAATCCCATGTTTAAAGCCCCTGGTAATGTGCAGCCTTCTACCAATCATCCATTATTGAGGCCTGTATCAGGTACTAACTCTGGTTTAGGTTAA 2553 0.4528 MIKPNHRAKTKGQSGDQRALTGRDPFSLSLSLCPLFPIPHPLRQSTTPQSNFPPSLKPLLLTMPASPSDNRNKWRKRKREPQISRRQQKHEEEDEDDEDPNGEDDQLERQDDSEDQTQHPNPQSGSNSQPQLEIEVLSDDGVQISQFPRVIKRTVNRPHASVTAIVALERANESGDNKGQFQNSPFLENVSHGQLQALSTVPADSSALDQDRNSSYVITPPPVLEGRGVVKRFGSRVLVVPMHSEWFSPATVHRLERQVVPRFFSGKSPDHTPEKYMECRNHIVARYMEDLGKRITISDCQGLLVRVDNEDLTRIFRFLDHWGIINYCSQVPSHEPRNDECYLKDEASGEIRVPLAALKSIDGLIKFDRPKCKLKGDEVYSSLTTQNADISDLEERIREHLSENHCNCCSRPLPAVFYQSQKEADILLCIDCFHDGRFVAGHSSIDFIRVDSTRDYGDLDGDSWTDQETLLLLEAMEIYNENWNEIAEHVGTKSKAQCILHFLRLPMEDGKLENINVPRMSLSSNISNGVDCERPHSNLDADFAGLTPSIDPNSRLPFSNSENPVMALVAFLASAIGPRVAAACAHAALAELSEINSGSMSQKEAPGQSNRMNLESTHSKDGSLPGEIASSNQQDEDETKALGSHGPNEGEAIPLSAEKVKDAAKAGLSAAAMKAKLFADHEEREIQRHCANIITHQLKRLELKLKQFAEIETQLMKECDQMEKTRQRLAAERSRLLSAWLGSGVATNTPGVGPSTVSNNNGNSRPQMAFGSSLQPSVSGYPSGQPVHPHMSFVPQPSMFGGLGQRLPLSMIQQPQSTSTNPMFKAPGNVQPSTNHPLLRPVSGTNSGLG 850
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco05g2743 850 Coils Coil 383 403 - -
Acco05g2743 850 ProSiteProfiles SANT domain profile. 459 510 IPR017884 -
Acco05g2743 850 MobiDBLite consensus disorder prediction 596 637 - -
Acco05g2743 850 FunFam SWI/SNF complex subunit SMARCC2 isoform C 460 510 - -
Acco05g2743 850 MobiDBLite consensus disorder prediction 596 652 - -
Acco05g2743 850 Gene3D - 244 331 IPR036388 -
Acco05g2743 850 Pfam SWIRM-associated region 1 666 736 IPR032451 -
Acco05g2743 850 MobiDBLite consensus disorder prediction 813 850 - -
Acco05g2743 850 SUPERFAMILY Homeodomain-like 237 328 IPR009057 -
Acco05g2743 850 Gene3D - 460 510 - -
Acco05g2743 850 ProSiteProfiles Zinc finger ZZ-type profile. 400 455 IPR000433 GO:0008270
Acco05g2743 850 ProSiteProfiles Myb-like domain profile. 456 506 IPR001005 -
Acco05g2743 850 PANTHER SWI/SNF COMPLEX-RELATED 128 736 - -
Acco05g2743 850 MobiDBLite consensus disorder prediction 1 28 - -
Acco05g2743 850 ProSiteProfiles SWIRM domain profile. 238 336 IPR007526 GO:0005515
Acco05g2743 850 SMART sant 460 508 IPR001005 -
Acco05g2743 850 Pfam Myb-like DNA-binding domain 463 505 IPR001005 -
Acco05g2743 850 Coils Coil 698 739 - -
Acco05g2743 850 CDD SANT 463 505 IPR001005 -
Acco05g2743 850 MobiDBLite consensus disorder prediction 93 111 - -
Acco05g2743 850 MobiDBLite consensus disorder prediction 42 56 - -
Acco05g2743 850 FunFam SWI/SNF complex subunit SMARCC2 isoform c 244 332 - -
Acco05g2743 850 SUPERFAMILY Homeodomain-like 461 514 IPR009057 -
Acco05g2743 850 MobiDBLite consensus disorder prediction 41 130 - -
Acco05g2743 850 Pfam SWIRM domain 241 327 IPR007526 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco05g2743 Acco-ChrAcco05 42693581 42699781 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco05g2743 406 502 EF-hand Containing Proteins AT3G07740 33.019 3.91e-10 61.6
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco05g2743 05 42693581 42699781 Acco05g2743 05 42693581 42699781 ECH