LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Acco05g2738	ATGGACGTGAAATGCAGGGGCATCGCAATGACTCTCCTGTTCTTTCTGGGATTTTCTGCTTTTTTACCCCTCTGTTTCTCCGAGCTCCATCTGCCCGGTCTCACTAAGAAGCGACATCCATTAATTTCTAATGATCTCATTGGCTCCTCCGTTGTTTTACCGGTTCAAGGGAACGTGTATCCCCTCGGTTATTACTCAGTTTCCCTGAACATTGGCAATCCCCCAAAAGCTTACGACCTTGATGTTGACTCCGGCAGCGATCTCACCTGGGTACAGTGCAACGCACCGTGTAAAGGTTGCACCAAGCCTCCGGGTCAGCAGTATAAGCCGAACAAGAACCTTGTTCCTTGTGGGGACCAGTTGTGTGGTGGAGTTCAGTCACCGCCGAGCCATCACTGTCAATCCCCCAATGACCAATGCGACTATGAGGTTGAGTATGCAGACCACGGCTCATCAATGGGTGTGCTGGTCCGAGACTTTATTCCTCTCCGGCTCACCAATGGGTCGGTCCCCGGTCCCCGTTTGGCTTTCGGGTGTGGGTACGATCAAACCTATTCTGGTCCAACCTCACCACCACCTACAGCAGGAGTGCTAGGTCTTGGAAATGGCAAGTCAGGCTTTTTGTCACAGCTTACATCTATGGGTCTCATTCGTAACGTCGTGGGCCACTGTCTAAGTGGTCGTGGCGGAGGTTTTTTATTTTTTGGAGATAATCTCGTTCCCTCCTCTGGGGTTTCTTGGACCCCAATCTTGCCTGGTTCCTCTGTAAAACACTACGTCTCTGGACCGGCGGATCTGCTTTTCAATGCAAAGCCAACTCCTGTGAAGGGTCTTCAGGTTATCTTTGACAGTGGAAGCTCCTACACTTACTTCAATTCCAATGCTTATAAAGCCATTCTTAATACGATAGTTAGTGATTTGAAGGGGAAGCAATTGAGCGGAGCAACAGCAGATCATTCCCTTCCAGTTTGTTGGAAAGGTACAAAGCCATTCAAATCTTTACGCGATGTGGCCAACCTTTTTAAGCCCTTAACACTGAGCTTCACAAGGTCAAAGAATGTACAGCTGCAATTGCCACCATCGTCATATCTCATTCTTTCCAAATATGGCAATGTCTGCTTGGGAATTCTTGATGGCTCTGGAGCTGGACTGGGAAATCTTAACATCATTGGAGACATATCTCTACAGGATAAAATGGTGATTTATGACAACGAGAAAAGGCAGATTGGATGGACTCCCGCAAACTGTGATAAGCTTCCCAAGTGA	1266	0.4803	MDVKCRGIAMTLLFFLGFSAFLPLCFSELHLPGLTKKRHPLISNDLIGSSVVLPVQGNVYPLGYYSVSLNIGNPPKAYDLDVDSGSDLTWVQCNAPCKGCTKPPGQQYKPNKNLVPCGDQLCGGVQSPPSHHCQSPNDQCDYEVEYADHGSSMGVLVRDFIPLRLTNGSVPGPRLAFGCGYDQTYSGPTSPPPTAGVLGLGNGKSGFLSQLTSMGLIRNVVGHCLSGRGGGFLFFGDNLVPSSGVSWTPILPGSSVKHYVSGPADLLFNAKPTPVKGLQVIFDSGSSYTYFNSNAYKAILNTIVSDLKGKQLSGATADHSLPVCWKGTKPFKSLRDVANLFKPLTLSFTRSKNVQLQLPPSSYLILSKYGNVCLGILDGSGAGLGNLNIIGDISLQDKMVIYDNEKRQIGWTPANCDKLPK	421

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Acco05g2738	421	ProSitePatterns	Eukaryotic and viral aspartyl proteases active site.	80	91	IPR001969	GO:0004190\|GO:0006508
	Acco05g2738	421	Pfam	Xylanase inhibitor N-terminal	65	237	IPR032861	-
	Acco05g2738	421	PANTHER	ASPARTYL PROTEASES	54	410	IPR001461	GO:0004190\|GO:0006508
	Acco05g2738	421	FunFam	Aspartyl protease family protein	42	237	-	-
	Acco05g2738	421	SUPERFAMILY	Acid proteases	57	419	IPR021109	-
	Acco05g2738	421	FunFam	Aspartic proteinase Asp1 isoform A	241	420	-	-
	Acco05g2738	421	ProSitePatterns	Eukaryotic and viral aspartyl proteases active site.	280	291	IPR001969	GO:0004190\|GO:0006508
	Acco05g2738	421	Gene3D	Acid Proteases	240	418	IPR021109	-
	Acco05g2738	421	PRINTS	Pepsin (A1) aspartic protease family signature	280	291	IPR001461	GO:0004190\|GO:0006508
	Acco05g2738	421	PRINTS	Pepsin (A1) aspartic protease family signature	71	91	IPR001461	GO:0004190\|GO:0006508
	Acco05g2738	421	PRINTS	Pepsin (A1) aspartic protease family signature	388	403	IPR001461	GO:0004190\|GO:0006508
	Acco05g2738	421	ProSiteProfiles	Peptidase family A1 domain profile.	65	412	IPR033121	-
	Acco05g2738	421	Gene3D	Acid Proteases	44	237	IPR021109	-
	Acco05g2738	421	Pfam	Xylanase inhibitor C-terminal	278	412	IPR032799	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Acco05g2738	Acco-ChrAcco05	42648676	42650823	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Acco05g2738	49	421	Miscellaneous Gene Families	AT1G44130	62.834	2.07e-172	486

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Acco05g2738	05	42648676	42650823	Acco05g2738	05	42648676	42650823	ECH