Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco05g2687 ATGAGGGCTGCCTCTGAATCCTCTGTGGTTGAGAGATTAGATGATGGGGAAAAGGACAAGAAGAAGAAACGCCGATCCAATCGTCGATCCAAACAAACTTCTGCCTCCTCAGCATCTTGTAATTCTGGAAACGAGATACAAGGGTTGTTATCAGAGTGCTCAGGAAACATCAGGACACCTATTCACGCCGATTCTCTATCAAGTGACACTTCATTGAGGCAGCAAGAGATCAAGATTTGTTCCCCTAACGAGCAAGGGTTGTCCAGGGCGTCAAATGTTTCTTTCACCTCAATGCTACCAATGCATTTCAATGAGCGTCAAATGGACCCTCTGGATTTGCAAAACATTCAGCGTAATGGTGGAGGTGTATGCTCAAAATCATGTTCAGAGCCAGTTGAATCATCAGTAACTTATACAAACAAAGACCTGGTCCCTTCTGATCAGACTCGGGTTTGTGTTCAGAGAAATTATTATAGTCCTCACTGGTCGATGGAAACTGTTGAGAAGGCTTTAGAGAAGGGGGATGTTTTTAAAGCCCTTTTTCGTGTCAATGCTCACAATAGACTTGAGGCATATTGTAAAATTGATGGGTTGCCAACTGATGTTCTCATTAGTGGAATTCACACGCAGAATAGAGCTGTTGATGGCGATATTGTTGCAGTTAAGATAGATCCTTTGGCTTTGTGGACTAAAATGAAAGGATCAAATGGTACTGGCAATGTTACTGCACCTGTAGAATGTTGTAACTCGCTTACAGAAGATAATGAAGTGGAGGGGAATATATTGATGCAAGTAGGTAAGGTAGATGCTGATTCTGAGTTTGTTAATTACTTCAACTGCCCTGCTCAAGACCAAGAGGATGTTAATCATGGCCCCACTACTTATGGAAATAATCCTTATCTTGAAAAGAAAGGGATAAATAATATTTATGCTTCTCCTGTTTCAACCAGCCCTTTAGATCCACCTGAACCAGTTACTCATGATGGTCATGATGCTGCTTCTGGTAACTTAAGTATAAGTTCTTATAGTGCACGAGGCGAAGTTATTAATGCTGTGGAAAACATGTGCTCGTTGGTTAATTCTTTCCCCTCTAAAAGACCAACCGGCAGGGTGGTTGCAATTGTTGAGAGGTCTCCACGCCGAGAGTCCATAATTGGTCATCTCAATGTTAGGCCAGCATTTCCTGTAAGAGACACATGCAGAAAAGATGCAAAGAAGAACAAAAAAATGGTTTCTGGGTGTGAGTATATTCATTTTATGCCAACTGATCCGAAGTTTCCAAAAATGATGCTCCTTGTTAGAGATTTGCCCGATTCCATGAAGAAGAGGCTGCAAACTGGGGATGCTACACTTGAAATGGATCTGGTAGCCGCACGAATTGATAACTGGTCTCAAGAAAGTCCTTGTCCTCAAGCTCACATATTGCATATTTTCGGACGAGGGGGTGAAATCCAGCCGCACTTAGATGCAATTTTGTTTGAGAATGCAGTCTGCGTGTCTGAATTTTCACCTGAAGCTTTGTCTTGCCTTCCTTATGTTTCTTGGGAGGTGCCCCTGAAAGAATTCCAAAGTAGAATGGACCTTAGAAACTTGTGTGTTTTTACCATTGATCCTTCAACTGCCTCTGATCTGGATGATGCACTATCCATTGAGAAGTTATCTAATGGGAATTTTAGAGTAGGTATACACATTGCTGATGTGTCATACTTTGTCTTACCGAACACAACCATAGACAGTGAGGCTCAGTCTAGGTCAGCAAGTGTTTATATGGCACAAAAAAAGTTATCAATGTTGCCACCATCATTTTCCGAGGATATAGGATCCCTTAATCCTGGAGTGGATCGACTTGCGGTTTCTATGCTCCTGGACATAAACCTTGATGGGGATGTATTGGATCGTTGGATTGGCCGTACTGTGATAAAGTCTTGTTGTAAGCTTTCCTATGAACATGCACAGGACATTATTGATGGGGTTATTGATGTTGAAAGTTCAAACGCAATAGGAGGTCACTATCCAAAGTTACATGGCCATTTTGAATGGCCTGATGTTATCACATCTGTGAAGAATCTATATGAAATTTCAATAGTTTTGAGAGAAAAGAGGTTGATTGATGGGGCTTTGCGACTTGAAAGCCCCAAAGTTGTTTTCCTGTTTGATGAGGATGGAATTCCTTATGATAGTATGCTCTCACAGCGAAAAGAATCGAATTTTCTGGTTGAAGAATTTATGCTTTTGGCTAGTCGAACAGCTGCTGAAGTTATTTGTAGAGCATATCCTGATGCTGCATTGTTGCGGAGACATCCTGAACCTAATTTGCGGAAGCTGAGAGAGTTTGAGGCATTTTGTAACAAACATGGTTTAGAACTTGATACATCTTCATCTGGCCGACTCCAATGGTCTTTAGAGAAGATCAGGGAAAAGCTCAAGGGTGATCCAACACTTTGTTATATTCTTATTTCATATGCTACAAAGCCAATGCGGTTGGCACAATATTTCTGTAGTGGGGATTTAAAGGACAAACAAAGTGATTGGGGTCATTATGCTTTGGCTGTCTCTGCTTACACTCATTTTACTTCACCTCTGCGTCGGTATCCTGATATAATCGTTCATCGTATGCTACTTGCTGTTATAGAGGCTGAGGAAATATATCTGGAGCATGAAAAGACATTGCAGGTTAAGAAGGGAGAGGCAGTGCGAGCAAGATATTTCACTGGTATGAACTTTGTTGAGGAAGCTGCTGAATCTGTGGAAGGGAAAAAGGCTCTATCTGCTTCTGCTTTGAAGCATGGACTTCCCTGTACTGAATTACTTGCAGAAGTTGCTGCCTATTGCAATGCGAGAAAGTTAGCTTGTAGAAATGTCAAGGATGCTTGTGATAAACTTTACATGTGGGTTCTCCTCAAGAAGAAGGAGGTGTTATTATCAGAAGCAAGAATATTGGGATTAGGCCCGAGGTTCATGTCAATTTATGTTCAAAAACTAGCTATTGAGCGGCGCATATATTATGATGAAGTTCCAGGCTTGAATGTGGAATGGCTGGATGCAACCTCAACTTTGGTACTTAGCATGTCTACTGATAAACGTGCGTTTAGGAGAGGTAGCCTTGGTAAATGGAGGGCATTTGAAGAAGTTGTGTTGCTTTCTTGTCCATATGACCTGGCAGACGCCAAAGATGGTATTAATGAATGTGATGGAGTGAAAATGGGAGATAGGGATCTTCGTTCCAGACCAGACAGTTCAGGGACTGAAATTGAGGCTGCAGTTTTCCCCCTCACTCTGCCTCTTCTTGCAACGGTTCCAGTAGCACTGCATGCTGTTGGTGGGGAGGATGGACCTCTTGACATTGGGGTGAGGCTGTTCATGAGCTCCTACTTGAGGCCTTTTCCATCATCTACCACTACCACTACTAGTATTAGGTTAATTCATGTTTCTTCCCACTTCCGGTTCTCTGATGGGTGCAGAGCTGAGAGCCGAAATTCTATGTTCGTTTGA 3492 0.4218 MRAASESSVVERLDDGEKDKKKKRRSNRRSKQTSASSASCNSGNEIQGLLSECSGNIRTPIHADSLSSDTSLRQQEIKICSPNEQGLSRASNVSFTSMLPMHFNERQMDPLDLQNIQRNGGGVCSKSCSEPVESSVTYTNKDLVPSDQTRVCVQRNYYSPHWSMETVEKALEKGDVFKALFRVNAHNRLEAYCKIDGLPTDVLISGIHTQNRAVDGDIVAVKIDPLALWTKMKGSNGTGNVTAPVECCNSLTEDNEVEGNILMQVGKVDADSEFVNYFNCPAQDQEDVNHGPTTYGNNPYLEKKGINNIYASPVSTSPLDPPEPVTHDGHDAASGNLSISSYSARGEVINAVENMCSLVNSFPSKRPTGRVVAIVERSPRRESIIGHLNVRPAFPVRDTCRKDAKKNKKMVSGCEYIHFMPTDPKFPKMMLLVRDLPDSMKKRLQTGDATLEMDLVAARIDNWSQESPCPQAHILHIFGRGGEIQPHLDAILFENAVCVSEFSPEALSCLPYVSWEVPLKEFQSRMDLRNLCVFTIDPSTASDLDDALSIEKLSNGNFRVGIHIADVSYFVLPNTTIDSEAQSRSASVYMAQKKLSMLPPSFSEDIGSLNPGVDRLAVSMLLDINLDGDVLDRWIGRTVIKSCCKLSYEHAQDIIDGVIDVESSNAIGGHYPKLHGHFEWPDVITSVKNLYEISIVLREKRLIDGALRLESPKVVFLFDEDGIPYDSMLSQRKESNFLVEEFMLLASRTAAEVICRAYPDAALLRRHPEPNLRKLREFEAFCNKHGLELDTSSSGRLQWSLEKIREKLKGDPTLCYILISYATKPMRLAQYFCSGDLKDKQSDWGHYALAVSAYTHFTSPLRRYPDIIVHRMLLAVIEAEEIYLEHEKTLQVKKGEAVRARYFTGMNFVEEAAESVEGKKALSASALKHGLPCTELLAEVAAYCNARKLACRNVKDACDKLYMWVLLKKKEVLLSEARILGLGPRFMSIYVQKLAIERRIYYDEVPGLNVEWLDATSTLVLSMSTDKRAFRRGSLGKWRAFEEVVLLSCPYDLADAKDGINECDGVKMGDRDLRSRPDSSGTEIEAAVFPLTLPLLATVPVALHAVGGEDGPLDIGVRLFMSSYLRPFPSSTTTTTSIRLIHVSSHFRFSDGCRAESRNSMFV 1163
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco05g2687 1163 FunFam DIS3-like exonuclease 2 147 249 - -
Acco05g2687 1163 Pfam Dis3-like cold-shock domain 2 (CSD2) 416 495 IPR041505 -
Acco05g2687 1163 ProSitePatterns Ribonuclease II family signature. 846 870 IPR022966 -
Acco05g2687 1163 SUPERFAMILY Nucleic acid-binding proteins 368 497 IPR012340 -
Acco05g2687 1163 Pfam RNB domain 525 877 IPR001900 GO:0003723|GO:0004540
Acco05g2687 1163 Gene3D - 147 245 - -
Acco05g2687 1163 SMART RNB_2 525 879 IPR001900 GO:0003723|GO:0004540
Acco05g2687 1163 SUPERFAMILY Nucleic acid-binding proteins 486 969 IPR012340 -
Acco05g2687 1163 SUPERFAMILY Nucleic acid-binding proteins 156 377 IPR012340 -
Acco05g2687 1163 Hamap DIS3-like exonuclease 2 [DIS3L2]. 20 1101 IPR028591 GO:0000175|GO:0034427
Acco05g2687 1163 MobiDBLite consensus disorder prediction 7 21 - -
Acco05g2687 1163 Gene3D - 400 483 - -
Acco05g2687 1163 PANTHER RIBONUCLEASE 20 1123 - -
Acco05g2687 1163 MobiDBLite consensus disorder prediction 1 43 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco05g2687 Acco-ChrAcco05 42288638 42294961 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco05g2687 05 42288638 42294961 Acco05g2687 05 42288638 42294961 ECH