Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco05g2650 ATGGCTGCTTCCATATGCATACCTCGTGCTGTTTCAGCACAGCCCGCCACAACTTTTCCCAGTTGGAAGTCTTTCAGAGAGCGGAAAACTGATCTGCAGCCAGGAATCCCTCGCAGTGTTCATATGGAGAACCTGCAAAACGAATACTTGTTTCCTGAGATATTCATGCGGGAATCTGAACATGCCCGGAAGAATCCACATGCGAAAGTAATTAAGCTTGGTATAGGTGATACCACAGAACCAATTCCAAATATCATAACTTCTGCTATGGTTGAGAAAGCACTTGCTTTGTCAACAGTTGACGGTTACACTGGATATGGACTAGAACAAGGAAACTGGGAATTAAGGAAGGCAATAGCTGAAAGACTCTACCGGAATTCACGCGTGAAGGAGAATGAGGTTTTCGTCTCCGACGGCGCACAGTGCGATATCTCACGCATCCAGATGCTTCTAGGATCTAATTCGACGGTGGCCGTGCAGGACCCAACTTTTCCGGCGTATGTAGATTCGAGTGTAATTATGGGCAGAGCAGGCAGGTTCCAAGCAGAAACTCAGAAATACAGGAACATAGTGTACATGGAGTGTGTACCAGAGAACAACTTCTTCCCAGACTTATCATCAACTCCGAGGGCTGATGTTATCTTCTTCTGTTCTCCGAACAATCCGACCGGTAACGCAGCAACAAGGCAGCAGCTGAAGCAACTGGTGGATTTTGCAAAAGAAAACGGATCCATAATCATATACGACTCGGCATATGCTGCTTTCATATCTGATGAAAGCCCAAGATCAATATTTGAAATCCCAGGAGCCAAAGAGGTAGCAATTGAAATCTCATCATTCTCCAAATTTGCTGGTTTTACTGGGGTCCGCCTAGGCTGGACGGTGGTCCCCGAGCAATTATTATACTCCAATGGATATCCCGTGATCAAAGATTATAATCGCCTAGTGTGCACCAGCTTTAATGGTGCATCAAATATTGTTCAAGCTGGGGGACTTGCCTGCCTTTCTGATGAAGGTCTTAAGGCACTGAGGAAGAATGTGAATTATTACAAGGAGAATGCGAAAATTCTGGTGGACACGTTCGAATCACTGGGGCTGAAGGTGTACGGAGGCAAAAACGCACCTTACGTCTGGGTGCATTTTCCGGGGAGAGATTCGTGGGACGTGTTCAACAAGATTCTACAGAGAACGGACATAGTCACCGTCCCGGGGATAGGATTTGGACCCGGCGGCGAGGGGTTTATTAGATTTAGTGCATTTGGTCGTAGAGACAAGATATTGGAAGCTTCAACAAGGCTGAGGAATTTTCTTTAG 1314 0.4619 MAASICIPRAVSAQPATTFPSWKSFRERKTDLQPGIPRSVHMENLQNEYLFPEIFMRESEHARKNPHAKVIKLGIGDTTEPIPNIITSAMVEKALALSTVDGYTGYGLEQGNWELRKAIAERLYRNSRVKENEVFVSDGAQCDISRIQMLLGSNSTVAVQDPTFPAYVDSSVIMGRAGRFQAETQKYRNIVYMECVPENNFFPDLSSTPRADVIFFCSPNNPTGNAATRQQLKQLVDFAKENGSIIIYDSAYAAFISDESPRSIFEIPGAKEVAIEISSFSKFAGFTGVRLGWTVVPEQLLYSNGYPVIKDYNRLVCTSFNGASNIVQAGGLACLSDEGLKALRKNVNYYKENAKILVDTFESLGLKVYGGKNAPYVWVHFPGRDSWDVFNKILQRTDIVTVPGIGFGPGGEGFIRFSAFGRRDKILEASTRLRNFL 437
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco05g2650 437 NCBIfam LL-diaminopimelate aminotransferase 39 435 IPR019942 GO:0008483
Acco05g2650 437 Hamap LL-diaminopimelate aminotransferase [dapL]. 37 436 IPR019942 GO:0008483
Acco05g2650 437 PANTHER AMINOTRANSFERASE 25 436 IPR019942 GO:0008483
Acco05g2650 437 CDD AAT_like 71 434 - -
Acco05g2650 437 Pfam Aminotransferase class I and II 69 419 IPR004839 GO:0009058|GO:0030170
Acco05g2650 437 SUPERFAMILY PLP-dependent transferases 48 433 IPR015424 -
Acco05g2650 437 FunFam LL-diaminopimelate aminotransferase, chloroplastic 80 337 - -
Acco05g2650 437 Gene3D - 80 337 IPR015421 GO:0003824
Acco05g2650 437 Gene3D Aspartate Aminotransferase, domain 1 50 433 IPR015422 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco05g2650 Acco-ChrAcco05 41991433 41994599 Dispersed/Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco05g2650 05 41991433 41994599 Acco05g2650 05 41991433 41994599 ECH