Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco05g2617 ATGTTCAACAACACATCAGAGAAAAACAAGAGCAACGCAGAGAACAACAACATGAAGAGAGACGAAGTGTTGGAAACGTGGTGGAATGGATTCCAAAACACATCATATCCCAATCCTCATCATGTCCATCGTTACAATGAGCATTTGGCGATTTACTCCCCTCAATGGAGTGTCTCTCACTCATCACATTCTCCTCTGTCAACTTCTTTCGCTGACGGGCTTCATGTTTCTCCCCGTAGTTCCTCATACACAGCTTCATTTCAGGACAGGCAGCATCTAACACCCTACGATCACCACTCAACTAATTTTTTGCCGGAGCTCGAGACATCGGATTTCCATATTGGGAATAGCATCATTGATAATCAAGCGGTTGATCTGGAGCTGTCTCAGGATTTCTATAGAATGAATTTTACAGATGGACAGGGAAATGGTAACAGAACAAAGGCACCTGAAGCGGATTCCTACGGATTTGGATTTGACGCTTTTCCTTTCGATATAAATATTCCCGGCGTTACTGAAACACGGACCTCCTATGAAAATTTTTGCAATGAAGTTCCCGCACCTAATTATGGGTGTATCCCATCGTCTACTTGGGGAGTTTCACCAAGTATGGTTGCTGGTATGAAGTGGGCTAACTATACCTCTGAGAAAGGATATACTTCTTCCCTCGCACATGGTCAATCCAGCGATTTGAATGTGTGCCCTGGTTGGAACATGAAACAAACATATCCTCAATCGGAGCACGTCAAGAAACAGGGGAGCAGCAGCTGTGATGGAGAAGTTCAACTGCAGAAGCCGTCTATCATCAACCCTTTCCCTTGTGATGCTATAACTAGAACACGAATTTGTGGGGTGGATTATGATGGAAGTAGGAGTGTCGAAAACCCCTTAAGATTCTCTCAGATTATGCACCCCATGCTAGCTTCACTTCTGGATACAAACGAAAGAACAAGGGGAATTGCTAACTTTGAGCTGCCTGAATTTCTCTCACCCGAAAGAGCTGTTGGCGATCCAGTGGCGTTTCAATGTGATAACAGTTTTATCATACAAGGAAAAGATTTAAATTATTGCATAGACAAAGGATACAATTCGTTGAGGGGTAACAAAAAGAATTCCCTCAATGAGAGTGCATTTGCAACTGCAGGGGAGAAAGCTTCTAGAGGCGATTATTATACTCCTGGCAGTCAATTTTGTGGGAATAACGGCAGTATTGTTGGTGATTTGCCACTGCACTCACCATTGAATTTCTGTTCTTTGGATGAGTGCCGAGGTTACATTAACTTTCTGGCAAAGGATCAGAATGGATGCCGCTTCCTACAAAGGATGGTTGATAAGGGGAATAAGGAGATGCTTATAGTATTTGAGGGAATAATTGATAATGTCGTTGAACTCATGATGGACCCCTTTGGTAACTATCTTGTGCAGAAGTTGCTGGATGTGTGTAGAGAAGAACAGAAGTTGCAGCTTGTGTCCATGGTGACCAAAGAACCAGGGCAGCTCGTCAGAATATCTTTAAACACGCATGGCACTCGGGTCATACAGAAGTTGATTGAGACGCTCAACAAGTCTAGGAAACAAATTTCATTAGTGAAGTCAGCCCTTCAAGCAGGTTTTCTTGATCTTATTAAGGATCTGCATGGAAAGCATGTGATACAACGTTGCTTGGAATGCCTTACCCGTCAAGATAATGAGTTTATTTTTTATGCTGCCGCAAAGTTTTGTGTTGACATAGCTACTCATCGACAAGGATGTTGTGTATTGCAACGATGCATTGATCATTCAGCTGGCAAATATCGAGATAAGCTGGTCACAGAGATATGTAGACATGCGCTTCTCCTTGCTCAAGATCCTTTTGGAAATTATGTCGTTCAGTATATAATAGTAGAGATGGGGATCCCTGCTCTCTCAGCGAAGCTGACTTCTCAGTTCAAAGGGAGCTATGTAAATCTGTCTATGCAAAAATTTAGCAGTCATGTGGTTGAAAAATGCCTTAAGCATGTTGTAGTGAGCAGATCAAGGATCGTCCGAGAATTGCTGGCTTCAGCTCACTTCGCACAGTTGTTGCAAGATCCATTTGCCAACTATGTCATTCAGTCTGCTCTTTCAGTGACAAAGGGTTCACTTCATACAACTTTGGTTGAAGCAGTTCGTGCTCACAAAAACTTGCGCAACAACCCGTTCAGCAAGAGGATTTTCTCGGGAAATCTACTCAAGAAGTAA 2220 0.4284 MFNNTSEKNKSNAENNNMKRDEVLETWWNGFQNTSYPNPHHVHRYNEHLAIYSPQWSVSHSSHSPLSTSFADGLHVSPRSSSYTASFQDRQHLTPYDHHSTNFLPELETSDFHIGNSIIDNQAVDLELSQDFYRMNFTDGQGNGNRTKAPEADSYGFGFDAFPFDINIPGVTETRTSYENFCNEVPAPNYGCIPSSTWGVSPSMVAGMKWANYTSEKGYTSSLAHGQSSDLNVCPGWNMKQTYPQSEHVKKQGSSSCDGEVQLQKPSIINPFPCDAITRTRICGVDYDGSRSVENPLRFSQIMHPMLASLLDTNERTRGIANFELPEFLSPERAVGDPVAFQCDNSFIIQGKDLNYCIDKGYNSLRGNKKNSLNESAFATAGEKASRGDYYTPGSQFCGNNGSIVGDLPLHSPLNFCSLDECRGYINFLAKDQNGCRFLQRMVDKGNKEMLIVFEGIIDNVVELMMDPFGNYLVQKLLDVCREEQKLQLVSMVTKEPGQLVRISLNTHGTRVIQKLIETLNKSRKQISLVKSALQAGFLDLIKDLHGKHVIQRCLECLTRQDNEFIFYAAAKFCVDIATHRQGCCVLQRCIDHSAGKYRDKLVTEICRHALLLAQDPFGNYVVQYIIVEMGIPALSAKLTSQFKGSYVNLSMQKFSSHVVEKCLKHVVVSRSRIVRELLASAHFAQLLQDPFANYVIQSALSVTKGSLHTTLVEAVRAHKNLRNNPFSKRIFSGNLLKK 739
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco05g2617 739 ProSiteProfiles Pumilio RNA-binding repeat profile. 533 568 IPR001313 GO:0003723
Acco05g2617 739 CDD Pumilio 417 733 IPR033712 GO:0003723
Acco05g2617 739 SMART pum_5 679 714 IPR001313 GO:0003723
Acco05g2617 739 SMART pum_5 456 491 IPR001313 GO:0003723
Acco05g2617 739 SMART pum_5 533 568 IPR001313 GO:0003723
Acco05g2617 739 SMART pum_5 421 455 IPR001313 GO:0003723
Acco05g2617 739 SMART pum_5 605 640 IPR001313 GO:0003723
Acco05g2617 739 SMART pum_5 495 531 IPR001313 GO:0003723
Acco05g2617 739 SMART pum_5 642 676 IPR001313 GO:0003723
Acco05g2617 739 SMART pum_5 569 604 IPR001313 GO:0003723
Acco05g2617 739 PANTHER RNA BINDING PROTEIN PUMILIO-RELATED 73 732 - -
Acco05g2617 739 ProSiteProfiles Pumilio RNA-binding repeat profile. 569 604 IPR001313 GO:0003723
Acco05g2617 739 ProSiteProfiles Pumilio RNA-binding repeat profile. 605 641 IPR001313 GO:0003723
Acco05g2617 739 FunFam Pumilio homolog 9 411 739 - -
Acco05g2617 739 SUPERFAMILY ARM repeat 419 732 IPR016024 -
Acco05g2617 739 Gene3D - 411 736 IPR011989 -
Acco05g2617 739 ProSiteProfiles Pumilio homology domain (PUM-HD) profile. 400 739 IPR033133 GO:0003723
Acco05g2617 739 ProSiteProfiles Pumilio RNA-binding repeat profile. 492 531 IPR001313 GO:0003723
Acco05g2617 739 ProSiteProfiles Pumilio RNA-binding repeat profile. 677 714 IPR001313 GO:0003723
Acco05g2617 739 ProSiteProfiles Pumilio RNA-binding repeat profile. 456 491 IPR001313 GO:0003723
Acco05g2617 739 Pfam Pumilio-family RNA binding repeat 683 701 IPR001313 GO:0003723
Acco05g2617 739 Pfam Pumilio-family RNA binding repeat 429 449 IPR001313 GO:0003723
Acco05g2617 739 Pfam Pumilio-family RNA binding repeat 460 492 IPR001313 GO:0003723
Acco05g2617 739 Pfam Pumilio-family RNA binding repeat 538 567 IPR001313 GO:0003723
Acco05g2617 739 Pfam Pumilio-family RNA binding repeat 499 526 IPR001313 GO:0003723
Acco05g2617 739 Pfam Pumilio-family RNA binding repeat 647 678 IPR001313 GO:0003723
Acco05g2617 739 Pfam Pumilio-family RNA binding repeat 574 607 IPR001313 GO:0003723
Acco05g2617 739 Pfam Pumilio-family RNA binding repeat 609 627 IPR001313 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco05g2617 Acco-ChrAcco05 41751301 41756258 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco05g2617 05 41751301 41756258 Acco05g2617 05 41751301 41756258 ECH