Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco05g2505 ATGCGATTTCTTATCACTGTCCTTCATCGTGTTTACCGTGAAAAAATGACAACATTCGAACTTTACCGGAGGTCGACGATCGGGATATGTCTCACCGATGCTCTCGACAGGATGGTTCAGAACGGTACTCTCAGCCCTGAGCATGCTATTCAGGTTCTTGTCCAGTTCGATAAGTCTTTGACTGAAGCTCTGGAAACGCAAGTCAAGAGTAAGATCTCCATTAAGGGGCATCTCCATACATACAGATTCTGCGACAATGTTTGGACCTTCATTTTGCACGATGTTTTGTTCAAGAATGATGATTGCCAAGAGCTAATAGCAAAGCTAAAAATAGTGGCATGTGACTCGAAGTTGCTATCGCAATAA 366 0.4317 MRFLITVLHRVYREKMTTFELYRRSTIGICLTDALDRMVQNGTLSPEHAIQVLVQFDKSLTEALETQVKSKISIKGHLHTYRFCDNVWTFILHDVLFKNDDCQELIAKLKIVACDSKLLSQ 121
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco05g2505 121 FunFam Transcription initiation factor IIA subunit 2 17 69 - -
Acco05g2505 121 PIRSF TFIIA_gamma_hum 15 121 IPR003194 GO:0005672|GO:0006367
Acco05g2505 121 FunFam Transcription initiation factor IIA subunit 2 70 121 - -
Acco05g2505 121 Pfam Transcription initiation factor IIA, gamma subunit 75 116 IPR015871 GO:0005672|GO:0006367
Acco05g2505 121 Gene3D - 18 69 IPR009083 GO:0005672|GO:0006367
Acco05g2505 121 PANTHER TRANSCRIPTION INITIATION FACTOR IIA SUBUNIT 2 16 121 IPR003194 GO:0005672|GO:0006367
Acco05g2505 121 SUPERFAMILY Transcription factor IIA (TFIIA), beta-barrel domain 67 117 IPR009088 GO:0005672|GO:0006367
Acco05g2505 121 CDD TFIIA_gamma_C 72 117 IPR015871 GO:0005672|GO:0006367
Acco05g2505 121 Pfam Transcription initiation factor IIA, gamma subunit, helical domain 19 64 IPR015872 GO:0005672|GO:0006367
Acco05g2505 121 Gene3D - 70 120 IPR009088 GO:0005672|GO:0006367
Acco05g2505 121 SUPERFAMILY Transcription factor IIA (TFIIA), alpha-helical domain 19 69 - -
Acco05g2505 121 CDD TFIIA_gamma_N 19 66 IPR015872 GO:0005672|GO:0006367
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco05g2505 Acco-ChrAcco05 40786448 40789024 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco05g2505 05 40786448 40789024 Acco05g2505 05 40786448 40789024 ECH