Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco05g2489 ATGTTCGAACCAAAGCAGCCATCTTCTTCGACTCCATCACAAACCCATAACCTCATAACTTGCCAGAATATCATGGATCCTCCCGATGATCATCAAGATGAACTTCACAGATGGCCAACTCTTAATGAGGTTGTATCAGAAATCAAAGCCATAGGAAAGATATCAGGCCCAACAGCCATAACTGGTCTGCTCATGTACTCGAGAGCTATGATATCTATGCTTTTTCTTGGCTATCTGGGTGAGATGGAGCTTGCAGGAGGCTCTCTCTCTATTGGATTCGCCAACATCAGTGGCTACTCAGTCCTCTCTGGTTTAGCAATGGGGATGGAACCCATCTGCGGACAAGCTCACGGCGCTAAGCAAGGCAAGCTTCTTGGCCTCACACTCCAAAGAACCGTCCTCCTCCTTCTCTCCACTTCAATACCAATCTCCTTCATGTGGCTCAACATGAAGACTATCCTCTTATGGTGTGGTCAAGATGAGTCCATATCCTCAATCGCACAAACTTTCATTTCCTTCTCCATTCCTGACCTCTTGTTTCTTTCTCTTCTTCACCCTCTTCGTGTCTTTCTCAGAACGCAAAGCATCACTTTGCCTTTAACTTATTGCTCAGCCATCTCTGTTCTCCTCCATGTCCCGTTGAATTTCCTTCTGGTTGTTCACTTCCAGATGGGTGTTGCTGGTGTGGCCATAGCCATGGTCTGGACTAACCTTAACCTCTTCCTCTTCCTTTGTTCCTTTGTCTACTTCTCCGATGTATGTAAGGACTCGTGGGTCACTCTTAGTATTGACTGTCTCAAGGGCTGGTCTTCTCTTCTTGCTCTTGCGATTCCAACCTGCGTCTCTGTGTGCCTTGAGTGGTGGTGGTACGAGCTCATGATAATGCTGTGTGGCCTTCTGGGTAATCCCAAAGCCACCATTGCATCAATGGGGATTCTGATTCAAACAACCTCACTAGTCTATGTCTTCCCATCTTCCTTAAGTCTTGGTGTTTCCGCAAGAGTGGGGAACGAGCTAGGCGCGAACCGACCCGGAAAAGCTCGCATTTCAATGATCGTCTCGCTCTTCTGTGCCGTCGGCTTGGGCCTGGGGGCTATGGGTTTCACCACCGTAATAAGGCACCAGTGGGGGAGATTCTTCACCGGCGACGAAGAAATCCTCAAGCTCACGGCCATCGCATTGCCTATCGCTGGCCTGTGCGAGCTCGGAAACTGCCCGCAGACCACCGGTTGTGGAGTTCTCAGAGGCAGCGCGAGACCCACAATTGGAGCAAACATCAATCTTGGTTCGTTTTACTTAGTGGGCATGCCGGTGGCGGTCCTGCTAGGTTTCATCGGTAAGCTGGGTTTTGCCGGACTCTGGCTCGGGTTGCTTGCTGCTCAAGCCTCATGTGCGTGCCTGATGCTGTTTGTTCTGTGCAGAACAGATTGGAATGTGTTAGCAGAAAAAGCAAGAGATCTAACTTCAGCCGAAGCTGCAGATTCTGGTTTATTACCCACATTCTCAAAAACAGAGTGTCACAAGAAGGATTCGTTTAAAGAGAAAGTGATCACTGATCCTGCCTCTCTTGAAACAGAACCTCTCATCATTCCCATCACTCATCCTTCAAACATACACTCGCAGTGA 1626 0.4877 MFEPKQPSSSTPSQTHNLITCQNIMDPPDDHQDELHRWPTLNEVVSEIKAIGKISGPTAITGLLMYSRAMISMLFLGYLGEMELAGGSLSIGFANISGYSVLSGLAMGMEPICGQAHGAKQGKLLGLTLQRTVLLLLSTSIPISFMWLNMKTILLWCGQDESISSIAQTFISFSIPDLLFLSLLHPLRVFLRTQSITLPLTYCSAISVLLHVPLNFLLVVHFQMGVAGVAIAMVWTNLNLFLFLCSFVYFSDVCKDSWVTLSIDCLKGWSSLLALAIPTCVSVCLEWWWYELMIMLCGLLGNPKATIASMGILIQTTSLVYVFPSSLSLGVSARVGNELGANRPGKARISMIVSLFCAVGLGLGAMGFTTVIRHQWGRFFTGDEEILKLTAIALPIAGLCELGNCPQTTGCGVLRGSARPTIGANINLGSFYLVGMPVAVLLGFIGKLGFAGLWLGLLAAQASCACLMLFVLCRTDWNVLAEKARDLTSAEAADSGLLPTFSKTECHKKDSFKEKVITDPASLETEPLIIPITHPSNIHSQ 541
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco05g2489 541 CDD MATE_eukaryotic 47 483 IPR045069 GO:0042910|GO:1990961
Acco05g2489 541 NCBIfam MATE family efflux transporter 60 454 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Acco05g2489 541 Pfam MatE 278 441 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Acco05g2489 541 Pfam MatE 57 217 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Acco05g2489 541 PANTHER MULTIDRUG RESISTANCE PROTEIN 43 477 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco05g2489 Acco-ChrAcco05 40619717 40621504 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco05g2489 05 40619717 40621504 Acco05g2489 05 40619717 40621504 ECH