Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco05g2407 ATGGCGTCAGCTTGCAGGGTTTTATTATCATTGAGGAAGAGGTACGCTGGAAGATTCAATTTTCTAGCTCTTCCTTCAAGCTCTCACCATTTGAATTTCCACAATGAGTCAAGTTCAAATCCCTTGCTCGTCAAATTACTTCGGGGATCCAACTCGCGCCTTAAAGCTACACTGGATCAGGAATTTTGTTCCCTTAAAAGCTCCGAATTTTCTTGGGAATCTCTGGTTACCTGTCTTAGGCCTTCTTCTCCTGAGAAAGCTCGGCTGGTTCTGGAATGGATTTTGGAGAAATTGCTGAAAGAAAATGAGAAAAATCACAGCGCCTTCTCCGATTACATATTTCTTTGCGGCAAGCTTCAGAATGTGCCACTCGCAATGCAAGCGTTTGCTTCTATGGAGGCTAATGGAGTTAAACCCACCTCCCTGGTTCTTAATTCCCTCATAGATGCTTGCTTGTATTCCAATGATATTACTACAGCATTTAGCTTATTTGAGATCATGGAAAGTTCAGAGAGCTATAAACCTGGTTTTCAAACTTATAATATGTTCATTACAGCATTTTCAATGTCAGGAAACATTGATGCCATGTTAGGCTGGTACTCAGCTAAAAAAGCTGCTGGATTCGGTCCTGATCTTCAAACATTCGAGTCTCTTATATCAGGTTGTATCAAATCAAGAAATTTTGAACTGGCTGATGAAATTTATGAAGAAATGATGTCATCAGGAATTATACCTAGCATATCCATTCTGGAAAACATGCTTGAAGGGCTTTGCAAGCAAAAGAGTTTGGGTCGAGCTGAGGAGTTCTTTAAGTACGTGATAGTTGTCAGATGGGACATCAATGAAAACATGACTGATAAATTAATGGCACTGTATCAAGAAATTGGGCAAGTGGAGAAGATGGAGAAGCTGCTTGAAATTATGATGAAGTCCCATTCTATTACCAATGGAGTCTTCTCCCGAATTCACTGCGGGCTTATACGAATGTATGCGAAACTGGATAGATTGGATGATGTAGAATTTGCTGTGGGAAGAATGTTGAAACTAGGGCTATCATTCACGAGTTCAGATGATGTTGAAAAGGTTATCTGCTCATACTTCAGAAGAGAAGCTTATGACAGGCTAGAAATATTCTTGGAATGCGTAGGGACTAGCTATACGCTGAGCAGATCCACTTACGACTTGTTGATATCTGGCTATAGAAGAGCTGGATTATACGAAAAAGTAGATTCAATGATCGAAGCCACGAAATCAGCTGGGGTTACGTAA 1269 0.4043 MASACRVLLSLRKRYAGRFNFLALPSSSHHLNFHNESSSNPLLVKLLRGSNSRLKATLDQEFCSLKSSEFSWESLVTCLRPSSPEKARLVLEWILEKLLKENEKNHSAFSDYIFLCGKLQNVPLAMQAFASMEANGVKPTSLVLNSLIDACLYSNDITTAFSLFEIMESSESYKPGFQTYNMFITAFSMSGNIDAMLGWYSAKKAAGFGPDLQTFESLISGCIKSRNFELADEIYEEMMSSGIIPSISILENMLEGLCKQKSLGRAEEFFKYVIVVRWDINENMTDKLMALYQEIGQVEKMEKLLEIMMKSHSITNGVFSRIHCGLIRMYAKLDRLDDVEFAVGRMLKLGLSFTSSDDVEKVICSYFRREAYDRLEIFLECVGTSYTLSRSTYDLLISGYRRAGLYEKVDSMIEATKSAGVT 422
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco05g2407 422 PANTHER EXPRESSED PROTEIN 34 420 IPR044179 GO:0003729
Acco05g2407 422 Gene3D Tetratricopeptide repeat domain 64 321 IPR011990 GO:0005515
Acco05g2407 422 Pfam PPR repeat 145 170 IPR002885 -
Acco05g2407 422 Pfam PPR repeat 391 420 IPR002885 -
Acco05g2407 422 Pfam PPR repeat 214 243 IPR002885 -
Acco05g2407 422 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 389 422 IPR002885 -
Acco05g2407 422 NCBIfam pentatricopeptide repeat 214 246 IPR002885 -
Acco05g2407 422 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 211 245 IPR002885 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco05g2407 96 414 Glycosyltransferase AT1G05670 20.679 1.23e-11 64.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco05g2407 05 39835660 39837407 Acco05g2407 05 39835660 39837407 ECH