Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco05g2356 ATGTGTACGCAGGAAGCTTCCAATCATTACTGTCTCTCACGATTTTATGTGGCGCTCACACCTCCCATTTCTGTTTGTTTTCATTCATTGTTTATAACCACAAGTGTTGTTTTCATTCCAACGAACCAAATTCACCCTCATAAATGTATAACGACCCACTGTTCAACGTACGAGCCCCTCCCCCGCAATTATCGTGGTCGAATGGCTGTACTGTTCACTACGCAAGTCATCTGTCAGTTGGCAACTTCCAACACTGGGTTGGGTAACTTTTCCACGTTAGAAAAAAAGCACAAGGCATTGTCCCGAAGCAATGTTGTGTCCGGCGAAACAGTGAGGCCTGTCTCCTACTACTCCACTTTACACATGTACATGTCCGGAAACTCCACCCACCTTCCTGTTATTTTATCTGGTTGGAGATTCTCCTTCCTTCACTGTTCTCCTTCCATGGCCGATGGGTTGCCAGCTTCTTGTATGCACCATTCGACTTTCACGCTGCCAACAACAATGCTCAAAATTCACATTCTCTCCTACCTCACTCCACTTCAATCCAACTCAAAGCCGATTTCTTCCTTTTTTATCACCTCTTCTTCTTCTCCAACTCGGCGTCGCTTGATGAGCACCGCTAATCTGCGTAAAAAGAACCTGAAGTGCCTTACTTCCCGCATCGTTCAACTCACCGGTCGAAGGCAGCTTCACCAGATATTTGAAGAGATTGAAATTGCCGAGAAACGTTATGGGAAGCTGAACACTATTGTCATGAACGCAGTCATGCAGGCCTGTGTTCATTGCGGTGATATTTATTCAGCTATTAGGATATTTAACGACATGACGAAACCGGGGAGCTGTGGCGTGGATACTGTCACGTATGCCACGCTTTTGAAGGGATTGGGCGAGTTGCGGAAAGTTGATGAAGCCTTTCAATTGCTTGAATCTGTGGAAAAAGGTACTGCACCTGGAAATCCAAAGCTGTCAGCGTCATTGATCTTTGGTCTGCTAAATGCCATAATCGAAGCAGGAGACTTACGTCGTGCAAATGGCCTCCTTGCTCGTTATGGTTATGTATTTCGTGAAGGTGGCAGTTTCTCTGTGTTAGTATACAACTTACTCATAAAGGGGTATGTCACCGCAGGTTTTCCTCTAGATGCTGTAAACTTGCACAATGAAATGTTACGTCATGGAATGAAGCCTGACAGGCACACCTACAACACTCTCATGTTAGCATGTGTCAAGAGTCAAAACTTGGATATTGCAGTGCAATTTTTTGAAAACATGAAGGATGAAGCACAGAAACCAACCCACAATGACATTTTGCCAGATATCGTCACATATACAACACTGCTCAAGGGTTTTGGGCAGGCCAAAGATCTCTCGTCAGTCCTGAGAATAGTGCTGGAAATGAAATCATGTCAGGAATTGTATATTGATCGAACCGCTTACACTGCAATAATTGATGCTTTATTAAACTGTGGCTCAATTAAGGATGCGCAATGCATCTTTGGAGAAATACTGAAGCTGGCTGGTTGGAATCCAGAGTTGAAGCCCAAGCCTCACCTTTATCTTTCCATGATGCGTGCTTTTGCTTCTAGAGGAGAATACAATGTAGTAAAAAACTTGCATAGGCGGCTTTTACCAGATTCTGCCGGAACCATCTTGCCAGTTGCTCAAGAAGAAGCTGATCATCTTCTCATGGAAGCAGCACTGAATAATGGTCAGGTCGATATTGCCATTGAAACTCTTGTTAATATTGCTTCAAAATGGAAGGGTATATCATGGACAAGTCGAGGAGGCATGGCAACTTTGCGGATTGAAGCCACATTAGGATTCTCAAAATCCGTATTCAGTCCTTACCTACTTCCACAGGTTTCACCTGCTGAACCAGTTGAGAGATTCATGTTGCCATTTGAGGCAACAGGACCACTACAAGGCACTGTCCAATTAAAGGAAGTGGTTATGCGTTTCTCTGACGATGCAGTTGTTCCAATAATAGATGATTGGGGCAGCTGTATTGGATTTGTGCACCGTGAAGACTGTGCTCAGTTGGACTTGAATGCTTCGCTTTCAACAATGATGAGAAGCCCTCCTCCCACTGTTACAACTACAAAATCAGTTGGTCACGTTGTTGATTTGATTTTGGAAAAGGGATACCCAATGGTTATCATTGTAAAGCACACCAGCTCATATGGTAGTATTTACAGCCCAAGGGCGGTTGGAGTTTTTACATCACAACAATTGTGTAGGCTTATTTCACCTGCCTTTGTATCACTAGGGCCAAAACTTTCAATCTTTTTGCCCATGGGGACTAAATTGAGTGACCCCTATAAAGGGTCTCTTTGGAGAGTTGAAAGAGAAGGAGAAAGAAGGGTTGGGGAGGAAGGGATAGAAACTGGGCTTGCAAAATGA 2400 0.44 MCTQEASNHYCLSRFYVALTPPISVCFHSLFITTSVVFIPTNQIHPHKCITTHCSTYEPLPRNYRGRMAVLFTTQVICQLATSNTGLGNFSTLEKKHKALSRSNVVSGETVRPVSYYSTLHMYMSGNSTHLPVILSGWRFSFLHCSPSMADGLPASCMHHSTFTLPTTMLKIHILSYLTPLQSNSKPISSFFITSSSSPTRRRLMSTANLRKKNLKCLTSRIVQLTGRRQLHQIFEEIEIAEKRYGKLNTIVMNAVMQACVHCGDIYSAIRIFNDMTKPGSCGVDTVTYATLLKGLGELRKVDEAFQLLESVEKGTAPGNPKLSASLIFGLLNAIIEAGDLRRANGLLARYGYVFREGGSFSVLVYNLLIKGYVTAGFPLDAVNLHNEMLRHGMKPDRHTYNTLMLACVKSQNLDIAVQFFENMKDEAQKPTHNDILPDIVTYTTLLKGFGQAKDLSSVLRIVLEMKSCQELYIDRTAYTAIIDALLNCGSIKDAQCIFGEILKLAGWNPELKPKPHLYLSMMRAFASRGEYNVVKNLHRRLLPDSAGTILPVAQEEADHLLMEAALNNGQVDIAIETLVNIASKWKGISWTSRGGMATLRIEATLGFSKSVFSPYLLPQVSPAEPVERFMLPFEATGPLQGTVQLKEVVMRFSDDAVVPIIDDWGSCIGFVHREDCAQLDLNASLSTMMRSPPPTVTTTKSVGHVVDLILEKGYPMVIIVKHTSSYGSIYSPRAVGVFTSQQLCRLISPAFVSLGPKLSIFLPMGTKLSDPYKGSLWRVEREGERRVGEEGIETGLAK 799
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco05g2356 799 Pfam PPR repeat 478 504 IPR002885 -
Acco05g2356 799 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 439 469 IPR002885 -
Acco05g2356 799 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 397 431 IPR002885 -
Acco05g2356 799 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 475 510 IPR002885 -
Acco05g2356 799 Pfam Pentatricopeptide repeat domain 433 467 IPR002885 -
Acco05g2356 799 SUPERFAMILY CBS-domain pair 643 729 IPR046342 -
Acco05g2356 799 ProSiteProfiles CBS domain profile. 689 755 IPR000644 -
Acco05g2356 799 NCBIfam pentatricopeptide repeat 399 427 IPR002885 -
Acco05g2356 799 NCBIfam pentatricopeptide repeat 441 469 IPR002885 -
Acco05g2356 799 NCBIfam pentatricopeptide repeat 365 397 IPR002885 -
Acco05g2356 799 NCBIfam pentatricopeptide repeat 287 311 IPR002885 -
Acco05g2356 799 PANTHER OS09G0431600 PROTEIN 183 750 IPR044781 -
Acco05g2356 799 Gene3D Tetratricopeptide repeat domain 321 433 IPR011990 GO:0005515
Acco05g2356 799 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 362 396 IPR002885 -
Acco05g2356 799 Gene3D Tetratricopeptide repeat domain 434 606 IPR011990 GO:0005515
Acco05g2356 799 Gene3D Tetratricopeptide repeat domain 167 316 IPR011990 GO:0005515
Acco05g2356 799 Pfam PPR repeat family 363 409 IPR002885 -
Acco05g2356 799 Pfam PPR repeat family 249 296 IPR002885 -
Acco05g2356 799 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 285 315 IPR002885 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco05g2356 Acco-ChrAcco05 39384896 39390829 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco05g2356 285 543 Glycosyltransferase AT1G05670 24.232 5.00e-14 74.3
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco05g2356 05 39384896 39390829 Acco05g2356 05 39384896 39390829 ECH