Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco05g2257 ATGTCAGAAGTCCTCGGTTTTACTGGAATTGATGATTTTTTCCCCGGGGGGTCAATATATGCTCACCCCAAGGAGCCCAGTCTCCTGTTGTCTCTTGGTCGTCATGTTGATTTATACTTTCCACCTCAGAAGAGATCTCGTTCCAGTGCTCCTTTGAAGAGATCACACATCAATGATCCTCTTCTTCTCAGTGGAGAGTGGTTTGAGGCCGAGGAGAAGCAGCAGACATCCATTGAAGATTTGCCCGATGAATGCCTCTTTGAGATCTTGAGAAGGTTGCCCGGAGGTCAGGAGAGGAGCTCATGTGCCTGTGTTTCCAAGCGCTGGCTTTGGCTTTTAGGTAATATTTGCAAGGATGAAATTTGCAGCACCGAAAAGACTAGTCGTGAGAATGATGTTACTGGAGAGGAGGCTGATGTTGAGGAATTTGGGGGTGGTGGATACCTCTCCCGAGACTTGGAAGGAAAGAAAGCGACTGATGTTAGACTTGCTGCTATTGCTGTTGGGACTGCTTCTCGTGGTGGATTGGGAAAGCTTTCAATCCGCGGAGGCAATTCAGGTTCTGCCGTGACTAATCTTGGTCTAAGGGCAGTTGCCCATGGATGCCCTTCTTTGAAGGCTCTTTCTCTTTGGAATGTTTCTACCATAGATGATGAAGGCCTGATTGAGATTGCTAGTGGATGTCCCCTGTTAAAGAAGCTTGATCTTTGCTATTGTCCCACGATATCTGATAAGGCTTTAATTGCAGTTGCAAAGAGCTGCCCTAACCTGACAGAGTTATCGATTGAATCATGTCCCAGAATTGGTGATGAAGGTCTACAAGCTGTTGGGCAGCTTAGCACTAGCCTAAGATCCTTATCAATAAAAAATTGCACTTGTGTTGGTGATAAGGGAATTGCGAGCCTTTTTTCTTCAGCTTCTTTTCTTCTAAAAAAAGTGAAGCTTGAGGCACTGACAATCTCTGACCTCTCTTTAGCTGTTATTGGACATTATGGTAAGGCAGTTACCGATCTCGCCCTTAAATACCTTCCTAATGTTAGTGAGAAAGGTTTCTGGCTCATGGGTAATGGCCACGGGTTGCAGAAGTTAAATTCACTCTCAATTGCATCCTGTCATGGAGTTACAGATATTGGACTTGATGCTTTAGGAAGGGGCTGCCCAAATCTCAAGCACCTGTATCTCTGTAAAAGTGCATTCCTTTCAGACTATGGGCTGATCTCATTTTCCACAGCTGCTTTATCAATTGAGAGCCTAAAATTGGAGGAGTGCCATAGAATCACCCAGCATGGGTGTTTTGGCGTCCTTTTCAATTGTCGTGCCAAATTGAATGCCCTTGCACTTATAAGCTGCTTTGGGATCAAGGATCAGAATTTGGTGTTGCCTTCTTTATCTCCTTGCTCACTTCAGTCTCTCTCAATTTGTAACTGTCCCGGATTTGGTGATGCTACAATGGCTTTACTGGGAAAGCTTTGCCCTCAGTTGCAGTGTGTTGAATTGAGCAGACTTGAGGGAGTGACTGATGCGGGGTTGCTCCCAGTGCTTTTGAATTCTGAGGCTGGTCTGGCTAAAGTTAATCTCAGTCACTGCATATATTTGACAGATAAAGTAGTTTCATCCCTCGCAAATAAGCATGGCTTGACTCTTGAGGTCTTAAATCTTAATGGTTGTAAAAGGATCAGTGATGTTAGCTTGATGGCAATTGCTGAAAACTGCCCATGGATCTGGGATCTGGATGTGTCTGAGTCTGCAATTACTGATGCCGGTATTTCAGCCCTGGCAGGTGGTGGCATGTTCCTTTTGCAGATCTTGTCCTTGTCAGGATGCTCTCTTGTTTCGAACAAGAGCCTGCCAGCTTTGCGAAACATGGGTGAGACCCTTCTGGGATTAAATATCCGCAACTGCAAGGCAATTAATAGCCGTACTATAGGGAAGCTTGTGGAACAGCTCTGGAGGTGTGACATCCTCGCTTGA 1971 0.4536 MSEVLGFTGIDDFFPGGSIYAHPKEPSLLLSLGRHVDLYFPPQKRSRSSAPLKRSHINDPLLLSGEWFEAEEKQQTSIEDLPDECLFEILRRLPGGQERSSCACVSKRWLWLLGNICKDEICSTEKTSRENDVTGEEADVEEFGGGGYLSRDLEGKKATDVRLAAIAVGTASRGGLGKLSIRGGNSGSAVTNLGLRAVAHGCPSLKALSLWNVSTIDDEGLIEIASGCPLLKKLDLCYCPTISDKALIAVAKSCPNLTELSIESCPRIGDEGLQAVGQLSTSLRSLSIKNCTCVGDKGIASLFSSASFLLKKVKLEALTISDLSLAVIGHYGKAVTDLALKYLPNVSEKGFWLMGNGHGLQKLNSLSIASCHGVTDIGLDALGRGCPNLKHLYLCKSAFLSDYGLISFSTAALSIESLKLEECHRITQHGCFGVLFNCRAKLNALALISCFGIKDQNLVLPSLSPCSLQSLSICNCPGFGDATMALLGKLCPQLQCVELSRLEGVTDAGLLPVLLNSEAGLAKVNLSHCIYLTDKVVSSLANKHGLTLEVLNLNGCKRISDVSLMAIAENCPWIWDLDVSESAITDAGISALAGGGMFLLQILSLSGCSLVSNKSLPALRNMGETLLGLNIRNCKAINSRTIGKLVEQLWRCDILA 656
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco05g2257 656 FunFam EIN3-binding F-box protein 1 517 654 - -
Acco05g2257 656 Pfam F-box-like 78 109 IPR001810 GO:0005515
Acco05g2257 656 SMART LRR_CC_2 491 516 IPR006553 -
Acco05g2257 656 SMART LRR_CC_2 466 490 IPR006553 -
Acco05g2257 656 SMART LRR_CC_2 202 227 IPR006553 -
Acco05g2257 656 SMART LRR_CC_2 254 279 IPR006553 -
Acco05g2257 656 SMART LRR_CC_2 280 305 IPR006553 -
Acco05g2257 656 SMART LRR_CC_2 386 411 IPR006553 -
Acco05g2257 656 SMART LRR_CC_2 412 437 IPR006553 -
Acco05g2257 656 SMART LRR_CC_2 571 595 IPR006553 -
Acco05g2257 656 SMART LRR_CC_2 597 622 IPR006553 -
Acco05g2257 656 SMART LRR_CC_2 228 253 IPR006553 -
Acco05g2257 656 SMART LRR_CC_2 545 570 IPR006553 -
Acco05g2257 656 SMART LRR_CC_2 360 385 IPR006553 -
Acco05g2257 656 SMART LRR_CC_2 518 543 IPR006553 -
Acco05g2257 656 Pfam Leucine Rich repeat 361 382 IPR001611 GO:0005515
Acco05g2257 656 Pfam Leucine Rich repeat 547 568 IPR001611 GO:0005515
Acco05g2257 656 Pfam Leucine Rich repeat 280 302 IPR001611 GO:0005515
Acco05g2257 656 Pfam Leucine Rich repeat 253 276 IPR001611 GO:0005515
Acco05g2257 656 Pfam Leucine Rich repeat 576 593 IPR001611 GO:0005515
Acco05g2257 656 Gene3D Ribonuclease Inhibitor 163 252 IPR032675 -
Acco05g2257 656 Gene3D Ribonuclease Inhibitor 463 516 IPR032675 -
Acco05g2257 656 Gene3D Ribonuclease Inhibitor 577 654 IPR032675 -
Acco05g2257 656 Gene3D Ribonuclease Inhibitor 517 576 IPR032675 -
Acco05g2257 656 FunFam EIN3-binding F-box protein 1 267 457 - -
Acco05g2257 656 SUPERFAMILY F-box domain 72 112 IPR036047 GO:0005515
Acco05g2257 656 SUPERFAMILY RNI-like 315 652 - -
Acco05g2257 656 PANTHER UNCHARACTERIZED 360 544 - -
Acco05g2257 656 FunFam EIN3-binding F-box protein 1 148 266 - -
Acco05g2257 656 Gene3D Ribonuclease Inhibitor 253 462 IPR032675 -
Acco05g2257 656 SUPERFAMILY RNI-like 186 364 - -
Acco05g2257 656 Gene3D - 70 123 - -
Acco05g2257 656 CDD F-box_AtTIR1-like 78 110 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco05g2257 Acco-ChrAcco05 38566696 38569280 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco05g2257 05 38566696 38569280 Acco10g1995 10 32582091 32584766 CCT
Acco05g2257 05 38566696 38569280 Acco05g2257 05 38566696 38569280 ECH