Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco05g2078 ATGCAATTAACCCCACTCTTCCCTCCTTCGCAGCGGGAAGAAGAAAGGGCATTTGCTCATAATAGATCTCTCCTTGCTGCTTCAATGGCGGTGCCGACCAAGTACATCTCGCAGCTAGAACTCAGCAAACACAACAAGAGGGGAGATCTCTGGATCTCTATACAGGGCAAGATCTATGACGTCTCTCGTTGGATTGACGACCACCCTGGCGGTGAGCTTCCGTTGTTCAATCTCGCCGGCCAGGACGTTACTAACGCCTTTCTTGCTTTCCACCCGGGATCTGCATGGCAATACCTAGATAGGTTCTTCACCGGGTATTATCTCCAAGACTACACTACTTCAGAGGTGTCTAAGGATTATCGGAAACTTGTAAACGAGTTCTCCAAAATGGGTTTATTCGAAAAGAAAGGACACGGTGTGTTCTTCTTGTTCTTGTTCATGGCAATTTTGTTTTGTGTTTGTGTTTATGGTGTTTTGTGCTGTGATAGCCCGTGGGTTCACGTGGGTTGCGGTGGGTTAATGGGGTTCTTGTGGATTCAGAGCGGCTGGATTGGACATGACTCAGGGCACTATCAGGTAATGACGACTCGGGGACTCAATTGGGTCGCTCAGATCCTAGCTGGGAATTGCCTTGCAGGAATCAGTATTGGATGGTGGAAGTGGAACCACAATGCTCACCACATTGCTTGTAACAGTCTCGAATTCGATCCTGATCTCCAGCATATGCCCTTTTTTGTGGTGTCTTCGAAATTTTTCAACTCCCTTACATCTTACATTTACGAGAGGAAGATGAATTTCGATTCTGTATCGAGATTCTTGGTTAGCTATCAGCATTGGACGTTTTATCCTGTAATGTGCTTTGCCAGATTAAACCTATTCGCCCAATCGTTCATCTTATTGTTGTCCAAGAGGAAGGTACCTACCAGAGGCCAGGAGCTTCTAGGGCTGCTTGTTTTCTGGATTTGGTATCCCCTACTGGTTTCCTGTTTACCCAACTGGTGTGAACGAATAATGTTTGTCATTGCTAGTTTTGCTGTTACTGGAATACAACATGTTCAATTCTGTTTGAATCATTTCTCTTCCAGTGTCTATGTCGGCCAGCCAAATGCTAATGATTGGTTTGAAAGGCAGACCAGTGGGACGCTTGATATTAAGTGCCCAGTTTGGATGGATTGGTTTCATGGTGGATTGCAATTTCAGGTGGCACACCATCTGTTTCCCAGGATGCCCCGGTGCAATCTGAGGAAAATCTCGCCACTGGTTATAGAGCTGTGCAAAAAGCATAATTTGCCTTACAATTGTGTGTCATTCTTGGAGGCCAATGCACTGACAATTCGGACACTCCGAGAGGCAGCCTTGCAGGCTCGCGATCTTTCTAATCCCATTCCCAAGAATTTAGTTTGGGAAGCTGTTAACACCCACGGATAA 1428 0.4601 MQLTPLFPPSQREEERAFAHNRSLLAASMAVPTKYISQLELSKHNKRGDLWISIQGKIYDVSRWIDDHPGGELPLFNLAGQDVTNAFLAFHPGSAWQYLDRFFTGYYLQDYTTSEVSKDYRKLVNEFSKMGLFEKKGHGVFFLFLFMAILFCVCVYGVLCCDSPWVHVGCGGLMGFLWIQSGWIGHDSGHYQVMTTRGLNWVAQILAGNCLAGISIGWWKWNHNAHHIACNSLEFDPDLQHMPFFVVSSKFFNSLTSYIYERKMNFDSVSRFLVSYQHWTFYPVMCFARLNLFAQSFILLLSKRKVPTRGQELLGLLVFWIWYPLLVSCLPNWCERIMFVIASFAVTGIQHVQFCLNHFSSSVYVGQPNANDWFERQTSGTLDIKCPVWMDWFHGGLQFQVAHHLFPRMPRCNLRKISPLVIELCKKHNLPYNCVSFLEANALTIRTLREAALQARDLSNPIPKNLVWEAVNTHG 475
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco05g2078 475 PIRSF FA_sphingolip_des 11 462 IPR012171 GO:0016491
Acco05g2078 475 CDD Delta6-FADS-like 168 430 - -
Acco05g2078 475 SMART Cyt_b5_2 36 108 IPR001199 -
Acco05g2078 475 Gene3D - 32 118 IPR036400 -
Acco05g2078 475 Pfam Cytochrome b5-like Heme/Steroid binding domain 40 107 IPR001199 -
Acco05g2078 475 PANTHER FATTY ACID DESATURASE 2 33 457 IPR012171 GO:0016491
Acco05g2078 475 SUPERFAMILY Cytochrome b5-like heme/steroid binding domain 33 110 IPR036400 -
Acco05g2078 475 Pfam Fatty acid desaturase 165 434 IPR005804 GO:0006629
Acco05g2078 475 ProSiteProfiles Cytochrome b5 family, heme-binding domain profile. 33 108 IPR001199 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco05g2078 Acco-ChrAcco05 37076899 37078619 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco05g2078 29 475 Lipid Metabolism Gene Families AT2G46210 63.252 0.0 628
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco05g2078 05 37076899 37078619 Acco05g2078 05 37076899 37078619 ECH