Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco05g2068 ATGAACTCTATACCGAGTATCATTATCGAGTCGACTCGGAATCTTCGTGGCTCTGCTATTTTCTTGTTATTCTCCATCGCCACCGTCAAAGTTTCCCACATTCTTTACCGACATCTTCAACGAAATTCTAGATTTTCCTCAATGTTTTCTTCTTCATCTTCAGTAAATGGCGACAAGGCTCTTCGACGAAACCGTATCCTCTCAAGCAAGCTCTACCTCGACGTCCCTCAGTTCAAGGTTCCGGTTATCTACTCGAAGTCGTACAATATAGCATTTCTGGGAATAGAGAAATTACATCCATTTGATTCATCTAAATGGGGAAACATTTGTCGATTCCTCATTGCATCTGGAATGCTAGACAAAAATTGCATTGTTGAGCCTCTGGAGGCTTCCAAGGATGATCTCCTAGTGGTACATTCAGAATCATACTTGAATAGCCTGAAGAGTAGTTCAAACGTTGCTATGATGATTGAGGTACCTCCAGTGGCATTATTTCCCAATTGTCTTCTGCAGCATAAAGCTCTCTTCTCATTTCGGAAGCAGGTTGGAGGGACTATATTGGCAGCAAAACTTGCAAAGGAAAGAGGATGGGCCATTAACATAGGTGGAGGTTTCCATCATTGTTCAGCAGAAAAAGGAGGTGGATTTTGTGTGTATGCAGATATTTCTCTATGCATCCGCTTTGCTTTTGTTCAATTAAATATATCAAGGGTAATGATCATTGATCTTGATGCACATCAAGGAAATGGTCATGAAATGGACTTTGCCAATGACAGCCGAGTCTATATCCTGGATATGTTCAACCCGGGTATATATCCCTTTGATTATGAGGCCAGAAGGTACATAGATCAGATAGTTGAAGTGAAGAGTGGGACACATACAGAGGATTACCTGCAGAAATTAGACCGAGAACTTGAGATTGCCGGGCATAGGTTTGATCCTGAGTTGGTAGTTTATAATGCTGGAACTGACATTCTGGACGGTGATCCATTGGGCAGGTTGAAGATCAGTCCTGAAGGTATTGCCCTTCGAGATGAAAAAGTTTTTCAATTTGCTCGAGAGAAGGAGGTTCCAATTGTCATGGTCACATCAGGTGGTTACATGAAGTCCAGTGCAAGAGTCATTGCAGATTCTATAGTCAATCTCTCAAATAGATGTTTGATCGATGTTAGACAAAGCTCAAAGTTCAAATAA 1194 0.4137 MNSIPSIIIESTRNLRGSAIFLLFSIATVKVSHILYRHLQRNSRFSSMFSSSSSVNGDKALRRNRILSSKLYLDVPQFKVPVIYSKSYNIAFLGIEKLHPFDSSKWGNICRFLIASGMLDKNCIVEPLEASKDDLLVVHSESYLNSLKSSSNVAMMIEVPPVALFPNCLLQHKALFSFRKQVGGTILAAKLAKERGWAINIGGGFHHCSAEKGGGFCVYADISLCIRFAFVQLNISRVMIIDLDAHQGNGHEMDFANDSRVYILDMFNPGIYPFDYEARRYIDQIVEVKSGTHTEDYLQKLDRELEIAGHRFDPELVVYNAGTDILDGDPLGRLKISPEGIALRDEKVFQFAREKEVPIVMVTSGGYMKSSARVIADSIVNLSNRCLIDVRQSSKFK 397
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco05g2068 397 Pfam Histone deacetylase domain 99 380 IPR023801 -
Acco05g2068 397 PANTHER HISTONE DEACETYLASE 2-RELATED 89 382 - -
Acco05g2068 397 Gene3D Histone deacetylase domain 80 395 IPR037138 -
Acco05g2068 397 PRINTS Histone deacetylase superfamily signature 314 324 IPR000286 -
Acco05g2068 397 PRINTS Histone deacetylase superfamily signature 203 226 IPR000286 -
Acco05g2068 397 PRINTS Histone deacetylase superfamily signature 237 252 IPR000286 -
Acco05g2068 397 CDD HDAC_classIV 99 382 IPR044150 GO:0004407|GO:0016575
Acco05g2068 397 SUPERFAMILY Arginase/deacetylase 77 383 IPR023696 -
Acco05g2068 397 FunFam Histone deacetylase 11 80 389 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco05g2068 Acco-ChrAcco05 36993604 36998799 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco05g2068 05 36993604 36998799 Acco05g2068 05 36993604 36998799 ECH