Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco05g2034 ATGGCAGATCACTACACTCTTTGCGGGATCTTTTTCTCTGCTTTGTTGGCCTTGGTTGCCCTCTACAATTTTGTTTTTGCCAGGAAGAGCCGTATTGTTTCCTCCGCCGCTTCACCTCAATGCATGAAGAACATAACCACCGCTGCCGGAGAATGTAGATCCCCTGATGGCAGCGGTGAGGTTGATGTCATTATTGTTGGAGCTGGTGTTGCTGGCTCTGCTCTGGCGCATACTCTTGGCAAGGATGGACGCCGAGTACATGTTATAGAAAGAGATTTGAGTGAGCCTGACCGAATTGTTGGAGAGTTGCTGCAACCGGGGGGCTATCTCAAACTAATTGAGCTTGGGCTTGAAGATTGTGTGAAGGAAATTGATGCTCAGCAAGTTTTTGGGTACGCTCTTTACAAGGATGGAAAAAATACTCGACTCCCATATCCATTGGAGAAGTTTCATTCAGATGTTTCTGGAAGAAGCTTTCACAATGGACGATTTATTCAGAGGATGAGAGAGAAGGCTGCCTCCCTTCCCAATGTACAATTGAAGGAAGGAACAGTTACTTCCCTACTTGAAGAGAATGGGACAATCAAAGGTGTCCATTATAAGACGAAACATGGCCAAGAATTTTCAGCTTATGCTCCTCTTACCATTGTTTGTGACGGGTGTTTTTCAAACTTGCGCCGTTCTCTTTGTAATCCCAAGGTAGACGTTCCCTCTTGTTTTGTTGGTTTGATATTGGAAAACTGTGAACTTCCATATGCAAACCATGGTCATGTTATACTAGCAGATCCTTCACCAATTTTGTTCTATCCTATAAGTAGCACGGAGATTCGCTGTCTGGTTGATGTACCTGGTCAGAAGGTTCCTTCAGTTTCAAATGGTGAAATGAGCAAGTATTTGAAGACAGTGGTAGCTCCGCAGGTACCCTCTGAGCTTTATGAAGCCTTCATAGCTGCGGTGGACAAAGGCAACATCAGGACAATGCCAAACAGAAGCATGCCGGCAGCCCCTTATCCTACACCTGGAGCCCTTCTAATGGGAGACGCATTCAATATGCGCCATCCTCTTACTGGGGGTGGAATGACTGTGGCCCTTTCTGACATAGTTGTGCTCCGGAATCTCCTCATGCCTTTACGTGACCTAAATGATTCATACACGCTTTGCAAATACCTCGAGTCCTTCTATACCTTGCGCAAGCCAGTGGCAGCCACCATAAATACGTTGGCAGGAGCCCTATACAAGGTGTTTAGTGCATCTCCTGATAAGGCGAGGAGTGAAATGCGGCAAGCATGCTTTGATTATCTGAGTCTGGGAGGTGTATTCTCGGAAGGACCAATTTCTTTGCTTTCTGGATTGAACCCCCGCCCCTTAAGCTTGGTTCTCCATTTCTTTGCCGTTGCAATATACGGCGTTGGCCGTCTGTTGATCCCATTTCCGTCGCCCAATCGGGCTTGGATCGGAGCACGATTGATATCCAGTGCTTCAGGAATAATCTTCCCCATAATCAAGGCGGAAGGAGTTCGCCAGATGTTCTTCCCCGCGACCGTCCCAGCTTATTACAGGACACCTCCGTCAAAACAGGAGTGA 1584 0.4703 MADHYTLCGIFFSALLALVALYNFVFARKSRIVSSAASPQCMKNITTAAGECRSPDGSGEVDVIIVGAGVAGSALAHTLGKDGRRVHVIERDLSEPDRIVGELLQPGGYLKLIELGLEDCVKEIDAQQVFGYALYKDGKNTRLPYPLEKFHSDVSGRSFHNGRFIQRMREKAASLPNVQLKEGTVTSLLEENGTIKGVHYKTKHGQEFSAYAPLTIVCDGCFSNLRRSLCNPKVDVPSCFVGLILENCELPYANHGHVILADPSPILFYPISSTEIRCLVDVPGQKVPSVSNGEMSKYLKTVVAPQVPSELYEAFIAAVDKGNIRTMPNRSMPAAPYPTPGALLMGDAFNMRHPLTGGGMTVALSDIVVLRNLLMPLRDLNDSYTLCKYLESFYTLRKPVAATINTLAGALYKVFSASPDKARSEMRQACFDYLSLGGVFSEGPISLLSGLNPRPLSLVLHFFAVAIYGVGRLLIPFPSPNRAWIGARLISSASGIIFPIIKAEGVRQMFFPATVPAYYRTPPSKQE 527
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco05g2034 527 PANTHER SQUALENE MONOOXYGENASE 21 523 IPR040125 GO:0004506|GO:0016126
Acco05g2034 527 PRINTS Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 62 84 - -
Acco05g2034 527 PRINTS Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 339 354 - -
Acco05g2034 527 PRINTS Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 354 370 - -
Acco05g2034 527 PRINTS Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 211 226 - -
Acco05g2034 527 SUPERFAMILY FAD/NAD(P)-binding domain 61 435 IPR036188 -
Acco05g2034 527 FunFam Squalene monooxygenase 2 55 435 - -
Acco05g2034 527 Gene3D - 55 435 IPR036188 -
Acco05g2034 527 Pfam NAD(P)-binding Rossmann-like domain 65 91 - -
Acco05g2034 527 Pfam Squalene epoxidase 212 479 IPR013698 GO:0004506|GO:0016020|GO:0050660
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco05g2034 Acco-ChrAcco05 36719247 36723412 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco05g2034 43 527 Miscellaneous Gene Families AT1G58440 80.082 0.0 819
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco05g2034 05 36719247 36723412 Acco05g2034 05 36719247 36723412 ECH