Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco05g1932 ATGGTTTTCCTTTGTGTATAGGTGCAGGCACAGTGCCTTACCAATGCCTCTTCTCTGAGTATTTTATACTTGATAGTTGATAGCGCAGTGCCAAGAAATATCAAGAAATGGAGGGGGCAACTAGAAATTTCAGAATTTCCTTCGTCCACCTCACCTCTTTATTTTGACAGAACCTTCCTTCTCTCTCTCAGGACAACCATGGCTCTCCCTCAGCACCACCTGCAACAACACTACCAAACCCAACCACTTCAACCACAATCAAAATCATTCAGAGCTTTACAGACAGCAGATGGTCAGATGTCGCAGCCAGTTGCCTTCTATAATCCAGCTGATTTGCAAGATCAGGCCCAGCATCCTCCCTATGTTCCTCCTTTTCACGTTGTGGGGTTTGCACCCGGTCCATTTCCTCCTGCTGACGGTAGTGATGGTGGAGCTGATTTGCAATGGAATTACGGGTTGGAATCCGAGAGGAAAAGACTTAAAGAACAGGATTTTCTGGAGAACAATTCTCAGATATCTTCTATAGATTTCCTCCAAACTCGATCGGTTTCCACTGGATTGGGTTTGTCACTTGACAATACCCGCATAGCTTCCACTGGAGACTCGGCTTTGCTATCACTCATTGGTGATGATATTGAACGTGAATTACAGCAGCAGGACGCAGAAATACAAAAGTATCTGAGAGTGCAGGGTGAACGTTTGCGGCAATCAATCATGGAGAAGGTTCAAGCAAGTCAACTTCAGAGCATATCACTTGTTGAAGACAAAGTCCTACAAAAACTTAATGAGAAAGAAGCAGAGGTTGAAAGCATCAATAAGAGAAACATGGAACTTGAAGAGCGTATGGAGCAGTTGACAATTGAAGCGAGCGCTTGGCAACAACGTGCCAGATACAATGAGAACATGATTGCTGCTCTCAAGTACAATCTTCAGCAAGTATATGCTCAAGGAAGAGACAGCAAAGAAGGATGTGGTGACAGCGAGGTGGACGATACTGCTTCATGCTGCAATGGCCGTTCAATTGATTTTCATCTGCTCTCCGGGGACAACAATGATATGAAAGAGATGATGACTTGTAAGGTATGCAGAGTCAATGAAGTCAGCATGCTTTTATTACCATGTAAACACCTCTGCCTTTGTAAAGATTGTGAGAGTAAGCTTAGTTCCTGCCCCTTGTGTCAATCCTCAAAATTTATTGGCATGGAGGTCTATATGTAA 1218 0.4384 MVFLCVXVQAQCLTNASSLSILYLIVDSAVPRNIKKWRGQLEISEFPSSTSPLYFDRTFLLSLRTTMALPQHHLQQHYQTQPLQPQSKSFRALQTADGQMSQPVAFYNPADLQDQAQHPPYVPPFHVVGFAPGPFPPADGSDGGADLQWNYGLESERKRLKEQDFLENNSQISSIDFLQTRSVSTGLGLSLDNTRIASTGDSALLSLIGDDIERELQQQDAEIQKYLRVQGERLRQSIMEKVQASQLQSISLVEDKVLQKLNEKEAEVESINKRNMELEERMEQLTIEASAWQQRARYNENMIAALKYNLQQVYAQGRDSKEGCGDSEVDDTASCCNGRSIDFHLLSGDNNDMKEMMTCKVCRVNEVSMLLLPCKHLCLCKDCESKLSSCPLCQSSKFIGMEVYM 405
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco05g1932 405 Gene3D - 368 395 - -
Acco05g1932 405 FunFam probable BOI-related E3 ubiquitin-protein ligase 2 341 405 - -
Acco05g1932 405 ProSiteProfiles Zinc finger RING-type profile. 359 394 IPR001841 -
Acco05g1932 405 Pfam Zinc finger, C3HC4 type (RING finger) 357 395 - -
Acco05g1932 405 Coils Coil 254 295 - -
Acco05g1932 405 FunFam Baculoviral IAP repeat containing 7 368 402 - -
Acco05g1932 405 CDD mRING-HC-C3HC5_CGRF1-like 358 393 - -
Acco05g1932 405 Gene3D Death Domain, Fas 233 367 IPR011029 -
Acco05g1932 405 Gene3D - 212 232 - -
Acco05g1932 405 PANTHER SBP (S-RIBONUCLEASE BINDING PROTEIN) FAMILY PROTEIN 157 403 IPR017066 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco05g1932 Acco-ChrAcco05 35706806 35712385 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco05g1932 359 395 Miscellaneous Gene Families AT2G21380 48.649 1.10e-07 52.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco05g1932 05 35706806 35712385 Acco05g1932 05 35706806 35712385 ECH