Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco05g1609 ATGGCAAACTCAGAAGAGGAAAATCAACTTCCATTTCCTCCAATCCCTAGAGATGGCTACAATACGCAGAATTTTTCCTCCAATGACGACGATGAAGAAGACGACTCTGAGGAAGTCGAGGATGATGAAGAAAGCAACGAACGGGATCCTCCTGCTCGAGTCCATGATGTGCTAATAAGGGGGAATACGAAAACCAAGGATTGGGTGATCGAGGCCGAGGTAGAGGAGATAAAGAGCGCCACAACTATGCTAGAGCTGGTAGCAGCGGCCAAAATTGCCAATGCCAAGCTTCATAGCCTCCAGATTTTTGATGCGGTCAATATTAAGCTTGAGCCAGGACCGCCAGAGTTGACTGGTACTGCCAATGTCATCATTGAGGTCTCAGAGGCCGATAGCAAACCTTCCGGTGAAGTCGGCGTTTTCTCAAAACCCTCGGCTAATTCTTGGTCTCTTGAAGGTGCTCTAAAGTTCAAAAACCTGTTTGGCTACGGTGATCTATGGGATGGTTCTCTAGCATATGGTCCCAATCAAACTTCAGAGGTGAGTGTTGGGGTGTTTGTGCCTCGATTGAAGGGATTATTAACCCCTGTTGTGGCACGAGCATTCATGCATTCCCAAGATTGGCAAGAGTATTCTTCATACAAAGAGCGATCGTCTGGCATATCTCTCAGCTTATTCTCAACAAAGCATCATGACTTAGCATACAATCTTGCATGGCGCACCATAACAGATCCATCACAGATGGCATCCAGATCAATTAGGAGACAGATTGGACATGGTTTATTGTCATCTTTGAAATATACATTTAAGATTGACCAGAGGAACTCATCGGTTAGGCCTACAAAAGGATATGCTTTTCTTTCTACAACTCAATTTGGCGGCCTTACACCAGATCACAGGAGCTTGCGGTTTCTGCGTCAGGAGTTTGATGTTCGATATGCCATTCCTCTTGGGTTTTTTCATACTGCACTCAACCTTGGGATCTCTGCTGGTGTCATTTTTCCATGGGGACATGGGTTCTTGAACAAGCCTTCACCCCTGCCTGAAAGGTTTTTCTTGGGTGGTGATTTCTCTCCAGTTTGCAGCCTAGGAGGGCCAACAACATTATGGGGATTCAGGACAAAAGCATTAGGCCCTACTGAGTCACGAAGACAAAATAGAGACGCAACTAATGATGACAATGTCAGTTCCTCTAGAAGGGACTTCGTTGGAGGAGATCTTGCTGTTACTGCTTTTGCAGACCTCTCTTTTGATCTTCCAATCAGCTGGTTAAGAGAACGTGGAATCCATGGACATGTGTTTGCTGGTGTTGGGAATATTGCCAAGTTAGCTGAGAATGAGTACAAGAAGTTCTCTCCTAAAAGTTTTTTGGATTCATTTCGAAGTTCTGTGGGATGTGGAATTGTTATTCCAACTAAAGTCATTCGCCTAGAGGGTAACTTCTACTACATACTCAGGCAGCATGAGCATGATTGTGGAAAGACTGGTTTTAGGTTTAGCTTTTCGGTTCCTTCATAG 1518 0.4486 MANSEEENQLPFPPIPRDGYNTQNFSSNDDDEEDDSEEVEDDEESNERDPPARVHDVLIRGNTKTKDWVIEAEVEEIKSATTMLELVAAAKIANAKLHSLQIFDAVNIKLEPGPPELTGTANVIIEVSEADSKPSGEVGVFSKPSANSWSLEGALKFKNLFGYGDLWDGSLAYGPNQTSEVSVGVFVPRLKGLLTPVVARAFMHSQDWQEYSSYKERSSGISLSLFSTKHHDLAYNLAWRTITDPSQMASRSIRRQIGHGLLSSLKYTFKIDQRNSSVRPTKGYAFLSTTQFGGLTPDHRSLRFLRQEFDVRYAIPLGFFHTALNLGISAGVIFPWGHGFLNKPSPLPERFFLGGDFSPVCSLGGPTTLWGFRTKALGPTESRRQNRDATNDDNVSSSRRDFVGGDLAVTAFADLSFDLPISWLRERGIHGHVFAGVGNIAKLAENEYKKFSPKSFLDSFRSSVGCGIVIPTKVIRLEGNFYYILRQHEHDCGKTGFRFSFSVPS 505
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco05g1609 505 FunFam Outer membrane OMP85 family protein 51 130 - -
Acco05g1609 505 Gene3D membrane protein fhac: a member of the omp85/tpsb transporter family 143 503 - -
Acco05g1609 505 PANTHER SORTING AND ASSEMBLY MACHINERY SAMM50 PROTEIN FAMILY MEMBER 23 502 IPR039910 -
Acco05g1609 505 MobiDBLite consensus disorder prediction 1 58 - -
Acco05g1609 505 Gene3D membrane protein fhac 50 130 - -
Acco05g1609 505 FunFam Outer membrane OMP85 family protein 141 503 - -
Acco05g1609 505 MobiDBLite consensus disorder prediction 27 45 - -
Acco05g1609 505 Pfam Omp85 superfamily domain 159 501 IPR000184 GO:0019867
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco05g1609 Acco-ChrAcco05 32503431 32508229 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco05g1609 05 32503431 32508229 Acco05g1609 05 32503431 32508229 CCT
Acco05g1609 05 32503431 32508229 Acco05g1609 05 32503431 32508229 ECH