Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco05g1581 ATGTCCAAACAGACTTACAGAGTCTGCTTCTGCTGCCGCCGGAGGTTCAGGCTTCGCGCCTCCGAGGCACCGCCGGAGATCAAGTCGCTTTTTGATCGCTACTCTGAGAATGGTTTTATGACTACTGCTCACCTCCAGAGGTTCTTGATTGACGTTCAGAAGGAAGATAAAGCCACCGAAGATGACGCCCAGGCCATCATCGACGGCCTCAAGCATTTGAACATTTTTTATCGAAGGGGTCTGCCTGTTGAAGGTTTCTTCAAGTACCTCTTCAGTGACCAAAATCAACCTCTCTCGCCTTCTCTTGGGGTACACCATGATATGACCGCACCGCTGTCTCATTATTTCATATTCACTGGTCACAATTCCTATCTCACTGGAAATCAGCTTAATAGCGATTGCAGTGACGTCCCCATTATAGATGCCCTGAAAAGAGGTGTAAGAGTGATAGAACTGGACATATGGCCTAATCGTTCAAAGGACGGTGTGCATGTTCTTCATGGAGGGACGCTGACTACCCCTGTGGAGCTTATCAAATGTCTGAGGTCCATTAAGGAACATGCCTTTTCTGCGTCTGAATATCCAGTTGTAATAACTTTAGAAGACCATCTTACTCCAGATCTGCAGGCTAAAGTGGCCGAGATGGTGACTCAAACGTTTGGAGAAATTCTATTTTCACCTGGCACGGAATGCCTGAAGGAATTTCCTTCTCCAGAATCACTTAAAAGGAGGATTATTATATCAACCAAACCGCCTAAGGAATACCTTGAGGTTAAAGAAGTAAAGGAAAAGGGGGACGAGTCACTGAAGTCAAAGGCCTCAAGTGATGAAGAAGCTTGGGGGAAGGAAGTCCCAGGCTTGAAATGTGGCACTTTAGCTGATGACAAGAACCATGTGTATGAAGAAGTTATTGAAGAGGAGGATCATGATGAAGCAGATACGTCACATCATAACGGAGCTCCTGAATATAGGCTTTTAATTGCCATTCATGCCGGTAAACCCAAAGGTGGAATAGACGAATGTCTGAAAGTGGATCCTGATAAAGTGCGACGTCTAAGCTTAAGTGAGCAAGAGCTTGAGAAGATTTCTGCAACCCGGGGAAAAGAAATTGTCAGGTTTACTCAGCGTAATATCCTGAGGGTGTATCCAAAAGGTACACGCATTGACTCATCAAATTATAACCCACATATTGGGTGGATGCATGGAGCTCAAATGGTTGCATTTAACATGCAGGGGCATGGAAGATCACTTTGGGTGATGCAAGGCATGTTCAAAGCCAATGGTGGATGTGGTTATGTTAAAAAACCAGATTTCCTATTGAAGACTTTCCCGAATAATGAGGTCTTTGATCCTAAAGCCAAGTTACCTGTTAAGACTACATTGAAGGTGACCGTGTACATGGGAGAAGGATGGTCTAATGATTTCAAGCCAACCCACTTTGATCAATTCTCACCTCCGGACTTCTACACAAGAGTGGGAATAGCAGGAGTACCAGCCGATACTGTGATGAAGAGGACAAAAGCAATAGAGGACGATTGGTTTCCTGCATGGAACGAGACATTCGAATTCCCTCTTACAGTTCCAGAACTGGCAGTGCTTCGCATAGAAGTTCATGAGTACGATATGTCTGAAAAAGATGACTTTGGTGGCCAAACATGCCTTCCTGTTCCAGAGCTCAGAAATGGAATTCGAGGAGTTCCACTACATTGTCGCAAGGGGGAGAAGTACAACTCTGTGAAGCTCCTTATGCGCTTTGAGTTTCTTTGA 1767 0.4493 MSKQTYRVCFCCRRRFRLRASEAPPEIKSLFDRYSENGFMTTAHLQRFLIDVQKEDKATEDDAQAIIDGLKHLNIFYRRGLPVEGFFKYLFSDQNQPLSPSLGVHHDMTAPLSHYFIFTGHNSYLTGNQLNSDCSDVPIIDALKRGVRVIELDIWPNRSKDGVHVLHGGTLTTPVELIKCLRSIKEHAFSASEYPVVITLEDHLTPDLQAKVAEMVTQTFGEILFSPGTECLKEFPSPESLKRRIIISTKPPKEYLEVKEVKEKGDESLKSKASSDEEAWGKEVPGLKCGTLADDKNHVYEEVIEEEDHDEADTSHHNGAPEYRLLIAIHAGKPKGGIDECLKVDPDKVRRLSLSEQELEKISATRGKEIVRFTQRNILRVYPKGTRIDSSNYNPHIGWMHGAQMVAFNMQGHGRSLWVMQGMFKANGGCGYVKKPDFLLKTFPNNEVFDPKAKLPVKTTLKVTVYMGEGWSNDFKPTHFDQFSPPDFYTRVGIAGVPADTVMKRTKAIEDDWFPAWNETFEFPLTVPELAVLRIEVHEYDMSEKDDFGGQTCLPVPELRNGIRGVPLHCRKGEKYNSVKLLMRFEFL 588
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco05g1581 588 Pfam C2 domain 460 560 IPR000008 -
Acco05g1581 588 PRINTS Phospholipase C signature 234 251 IPR001192 GO:0035556
Acco05g1581 588 PRINTS Phospholipase C signature 399 417 IPR001192 GO:0035556
Acco05g1581 588 PRINTS Phospholipase C signature 137 157 IPR001192 GO:0035556
Acco05g1581 588 PRINTS Phospholipase C signature 554 564 IPR001192 GO:0035556
Acco05g1581 588 PRINTS Phospholipase C signature 111 129 IPR001192 GO:0035556
Acco05g1581 588 PRINTS Phospholipase C signature 378 399 IPR001192 GO:0035556
Acco05g1581 588 SUPERFAMILY EF-hand 24 100 IPR011992 -
Acco05g1581 588 Pfam Phosphatidylinositol-specific phospholipase C, Y domain 352 438 IPR001711 GO:0004435|GO:0006629|GO:0007165|GO:0035556
Acco05g1581 588 ProSiteProfiles C2 domain profile. 440 570 IPR000008 -
Acco05g1581 588 PANTHER PHOSPHOINOSITIDE-SPECIFIC PHOSPHOLIPASE C FAMILY PROTEIN 12 587 IPR001192 GO:0035556
Acco05g1581 588 Gene3D - 22 101 - -
Acco05g1581 588 FunFam Phosphoinositide phospholipase C 455 588 - -
Acco05g1581 588 Pfam Phosphoinositide-specific phospholipase C, efhand-like 26 95 IPR015359 -
Acco05g1581 588 ProSiteProfiles Phosphatidylinositol-specific phospholipase Y-box domain profile. 353 439 IPR001711 GO:0004435|GO:0006629|GO:0007165|GO:0035556
Acco05g1581 588 SMART plcy_3 323 440 IPR001711 GO:0004435|GO:0006629|GO:0007165|GO:0035556
Acco05g1581 588 ProSiteProfiles Phosphatidylinositol-specific phospholipase X-box domain profile. 106 250 - -
Acco05g1581 588 SMART plcx_3 106 250 IPR000909 -
Acco05g1581 588 Pfam Phosphatidylinositol-specific phospholipase C, X domain 108 250 IPR000909 -
Acco05g1581 588 SUPERFAMILY PLC-like phosphodiesterases 106 441 IPR017946 GO:0006629|GO:0008081
Acco05g1581 588 Gene3D Phosphatidylinositol (PI) phosphodiesterase 103 453 IPR017946 GO:0006629|GO:0008081
Acco05g1581 588 Gene3D C2 domain 455 588 IPR035892 -
Acco05g1581 588 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 460 587 IPR035892 -
Acco05g1581 588 SMART C2_3c 460 568 IPR000008 -
Acco05g1581 588 CDD C2_PLC_like 458 587 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco05g1581 Acco-ChrAcco05 32141372 32145925 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco05g1581 1 588 Acyl Lipid Metabolism Gene Families AT3G55940 68.456 0.0 810
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco05g1581 05 32141372 32145925 Acco05g1581 05 32141372 32145925 CCT
Acco05g1581 05 32141372 32145925 Acco05g1581 05 32141372 32145925 ECH