Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco05g1580 ATGGCGGGAACCTACAACTACAAAATATTCAATTGCTTCAACCTTAAGTTTACTGTCTCCGAGCCGGGCCCACCCGAGGACGTCAAGTACGTCTTTTACAAGTTTTCCTCCGGTGGAGATCACTTGTCCGCCGATCAACTAGGCCATTTCCTGTTGAAGCACCAAGGTGAATCGGACTTGACCTCCTCGGATTTCACCCAGATTGTGGAGAAGATCTTGCAATTGCGGAATCAGAATGAGGAGATCGAATCTATCGAAAAGAAGAATGAGGAGATTGAAACTTCTAAGGAGGCCGCGAGCTCCATTGAGGGTATCAGTCTCGACGAATTCTTTCATTTTCTACTCCTCGACGATTTCAACGCCCCCTTAAAATCCCAAGTGCATCATGATATGAATGCTCCGCTGTCACATTATTTCATATATACAGGACACAATTCTTATCTCACTGGGAATCAACTGAGCAGTGATTGTAGTGATGTGCCAATTATAAAGTCTTTGCTTGATGGTGTGCGAGCAATTGAACTAGATTTATGGCCAAATTCAACTCGAGACGATGTTATTGTAGTTCATGGAAGGACTCTTACCTGTCCCGTTCCACTCATTCAATGCTTGAAGTCAATAAAAGAGTATGCATTTGTTAAATCTCATTACCCCGTCATTATAACTCTAGAAGACCATCTCCCAACAGATCTTCAAGCTAAAGTTGCAGAGATGGTAACAGAAATATTTGGAGAAGCCCTTTACTATCCCGGGACAGATGGTATGGCAGAATTCCCCCCACCAGAATCTTTGAAAGGTCGAATTCTTATATCAACCAAACCACCAAAAGAGTATCTTGAATCTGAATGTTCATCGCCAACAGGTCAAATGGATGAACCAGAAACTGATAGCAAGTGGCGGGATGAAAGTGATGAAGAAGTGGAAGATTTGAATGCAAGTGAAGAAAAATCACTCCAGCTATGGGCACCAGAGTATGGGCGCTTAATCACAATCCATGCCGGGAAACCTAAGGGTCAAGCAAAGGATTATTTAAGTATTGTTGGTAATGTCGGACGCCTAAGCATGTGTGAACAGAGGCTTCTAAAGACTTGTGCATCCCATGGAGATGAAGTTATTAGGTTCACTCAGAAGAATATTCTCAGGATTTTCCCAAAAGGAACACGTGTGTCTTCCTCAAATTTCAGACCACATATTGGGTGGAATTATGGAGCTCAGATGGTTGCATTCAACATGCAGGGGTATGGAAGATCACTATGGTCCATGCAAGGGATGTTTAGAGGAAATGGAGGCTGTGGTTACGTGAAAAAGCCCGATTGCTTATTGTTGAGAGGTCCCCATGCTGAGGTTTTCAATCCTACCAGAGTATTGCCAGTGAAGACAACATTAAAGGTTAAAGTATATCTAGGTACCGGATGGAGCTCAGATTTCAGCCAAACACACTTTGATTCATACTCTCCACCTGACTTTTACACAAAGGTTTGTATTGTTGGGGTAGATAATGATAAAGTCAAGAAGAAAACAAAGGTAATAGATGATGATTGGTTCCCCGTTTGGGATGAAGAGTTTGAGTTCCCTCTGACTGTTCCAGAGTTGGCTTTACTGAGGATAGAAGTTCGAGAGTATGATAGGCATGAATCAGATGACTTTGGTGGGCAGACGTGTTTGCCGGTTTTTGAGCTAAGATCTGGATTCCGGTCAGTCCCTCTATATGACAAAAAGGGCAGCCAACTCAAGTCTGTGAGGCTTTTCATGCATTTTCACTTTGTTTCATGCTAG 1776 0.4285 MAGTYNYKIFNCFNLKFTVSEPGPPEDVKYVFYKFSSGGDHLSADQLGHFLLKHQGESDLTSSDFTQIVEKILQLRNQNEEIESIEKKNEEIETSKEAASSIEGISLDEFFHFLLLDDFNAPLKSQVHHDMNAPLSHYFIYTGHNSYLTGNQLSSDCSDVPIIKSLLDGVRAIELDLWPNSTRDDVIVVHGRTLTCPVPLIQCLKSIKEYAFVKSHYPVIITLEDHLPTDLQAKVAEMVTEIFGEALYYPGTDGMAEFPPPESLKGRILISTKPPKEYLESECSSPTGQMDEPETDSKWRDESDEEVEDLNASEEKSLQLWAPEYGRLITIHAGKPKGQAKDYLSIVGNVGRLSMCEQRLLKTCASHGDEVIRFTQKNILRIFPKGTRVSSSNFRPHIGWNYGAQMVAFNMQGYGRSLWSMQGMFRGNGGCGYVKKPDCLLLRGPHAEVFNPTRVLPVKTTLKVKVYLGTGWSSDFSQTHFDSYSPPDFYTKVCIVGVDNDKVKKKTKVIDDDWFPVWDEEFEFPLTVPELALLRIEVREYDRHESDDFGGQTCLPVFELRSGFRSVPLYDKKGSQLKSVRLFMHFHFVSC 591
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco05g1580 591 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 461 588 IPR035892 -
Acco05g1580 591 Pfam C2 domain 462 563 IPR000008 -
Acco05g1580 591 Pfam Phosphatidylinositol-specific phospholipase C, Y domain 354 439 IPR001711 GO:0004435|GO:0006629|GO:0007165|GO:0035556
Acco05g1580 591 SUPERFAMILY PLC-like phosphodiesterases 129 441 IPR017946 GO:0006629|GO:0008081
Acco05g1580 591 SMART plcx_3 129 273 IPR000909 -
Acco05g1580 591 PRINTS Phospholipase C signature 555 565 IPR001192 GO:0035556
Acco05g1580 591 PRINTS Phospholipase C signature 379 400 IPR001192 GO:0035556
Acco05g1580 591 PRINTS Phospholipase C signature 257 274 IPR001192 GO:0035556
Acco05g1580 591 PRINTS Phospholipase C signature 400 418 IPR001192 GO:0035556
Acco05g1580 591 PRINTS Phospholipase C signature 134 152 IPR001192 GO:0035556
Acco05g1580 591 PRINTS Phospholipase C signature 160 180 IPR001192 GO:0035556
Acco05g1580 591 ProSiteProfiles Phosphatidylinositol-specific phospholipase X-box domain profile. 129 273 - -
Acco05g1580 591 SMART C2_3c 461 569 IPR000008 -
Acco05g1580 591 Gene3D C2 domain 456 590 IPR035892 -
Acco05g1580 591 SMART plcy_3 325 441 IPR001711 GO:0004435|GO:0006629|GO:0007165|GO:0035556
Acco05g1580 591 SUPERFAMILY EF-hand 6 131 IPR011992 -
Acco05g1580 591 CDD C2_PLC_like 459 588 - -
Acco05g1580 591 ProSiteProfiles Phosphatidylinositol-specific phospholipase Y-box domain profile. 354 440 IPR001711 GO:0004435|GO:0006629|GO:0007165|GO:0035556
Acco05g1580 591 PANTHER PHOSPHOINOSITIDE-SPECIFIC PHOSPHOLIPASE C FAMILY PROTEIN 10 588 IPR001192 GO:0035556
Acco05g1580 591 ProSiteProfiles C2 domain profile. 442 571 IPR000008 -
Acco05g1580 591 FunFam Phosphoinositide phospholipase C 456 589 - -
Acco05g1580 591 Coils Coil 68 102 - -
Acco05g1580 591 Gene3D Phosphatidylinositol (PI) phosphodiesterase 126 454 IPR017946 GO:0006629|GO:0008081
Acco05g1580 591 FunFam Phosphoinositide phospholipase C 126 454 - -
Acco05g1580 591 Gene3D - 24 125 - -
Acco05g1580 591 MobiDBLite consensus disorder prediction 278 313 - -
Acco05g1580 591 Pfam Phosphatidylinositol-specific phospholipase C, X domain 131 273 IPR000909 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco05g1580 Acco-ChrAcco05 32131407 32135849 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco05g1580 2 588 Acyl Lipid Metabolism Gene Families AT2G40116 56.731 0.0 698
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco05g1580 05 32131407 32135849 Acco05g1580 05 32131407 32135849 CCT
Acco05g1580 05 32131407 32135849 Acco05g1580 05 32131407 32135849 ECH