Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco05g1574 ATGGGTTCTTCTAAAGAAGACAGATTCACGAGGATATTGAGGGGTTTCAAGACTCTGTTCTTCTTGATCACCATGATCATATCGCTTTTGCTCTTCTCTGCTCCGATTATTCTTGTTCTCGCCGATGCCCTTCTACCTTCTGCTCTTCTCTCTGCTCTCTCACCTTCCCCTCTCTCTCTGAAATCTCTCTCTTCCCACCTCCAAAACTACGATTTCCGAAACTCCCTCATCGATATCCCCCTCGTTTCCATCATAAGATCCCTTGTCATCTTCTGTGTTTATAGTTTCTGCGATGGCCCGAGGCTTTCTCGGGGACCATATCTGGGGATAACGACGATGTGCTCTGTTTCGACTCTGATTTTTGTGTCTATGAAAGCTGTGTACGTTTTCAGCCTCCCAAATTCGTATCAAGGAAGCGGCCATGTGAGAGCCTTCGAGATAGCCCTGTTCGTGTGTTCGTGTGCTCTGGCTATTGGGCATATCGCCGTAGCTTACAGAACAAGTTGCAGAGAAAGACGAAAGCTTCTGGTGTACAAAATTGACGTTGAAGCTATTTCAGCTTGCAAGAGGTACCCCAAGATAAGTCTTAAGGAAGAACGAATCAATCCACAATATAATGCAGTAACAACTTTGTATAGTGCAAACTACAAACTGTCCACTAAGTTACAAAAGGCCAAGGTGGGTTCGGAAGTTCAGGTAACACTTGGGTGGGTTGTAGCGCATAGAGTGATGAGGATTGCATTGGACGCAGAGGAGACGAACTCTGAGCCGAGGCGCTCAACAACGCCCAAAGAAGAAGTTGAATGGGTTCCACTTGAGAAACACCCTGTCTTCGTTGCTGCGAATAACTCCATAGACGGCGACCACGGCGTTGCATTTTCCAGAAATCTCGCGGCCTGGGATGGATCCTCTCGCCTCTATTTCTGGGAACCTAAGAGCAACTGCCTCCATCGTCTGTCTCTTCGGCTGGGCGAGCCTGAGCCTACTTCTATACTTGCTGCTTCCCCTTCTAAGGTATTGCGAGCAGACATTGAGATCAACTTTGCTATCCACAAAATCTCCATCAACAGGAATGGATCAGCGTTACTTCTTTTTGGTTCTGAAAGACTGTGTGTTATGTATCTGTATGGACGTACTTCCAAAAAGGATGTAAATTTGATTTGCAGGACTATTATCATCGGTTCACACACATATTCCAAGAGTGGCAATGATATACGTGTGCTAAAGGCTTTATGGCATCCTCATAGTGACTGTCATGTGGGAATCCTTTCTTCTGACTCAGTTTTCAGGCTTTTTAATTTGGCTTTGGATCCTTTGCAACCTGAGCAAGAATATTATTTGCAGCCTGTGGATCCAGGCAGATCGAGAAGTGCTTCATCAATGTGCCCAGCTGATTTTTCTTTTGGTGGTGACCACTTATGGGACAGGTTTAGTGTATTTATTTTGTTTGGAGATGGAGCTATTTACATCCTTTGCCCAGTGGTTCCATTTGGAAGTCTCTTCAAATCAGAATCTGTGCTAGAAATATACAATGATGCTCATATATTTGGGCTCAAATCTGCAAATTCTAAAGCTGCTAGTAATTCAAAATTGGCAATCTCATGGTTGGAAGCAACATTCCCTGAGTTACAAAATCAAGAGACAGAAGAAAACATGTGTGTGATGAGAGCTCATGCTTATGCTCAATTTGATGCATCTCTTACCCTGCAGGGACCTCTTCGAAGAGTAGGCCAAGGTGGGAGTGAAGATTCTGTTGGTCGTAGTGCAGAATGTGAAGGCCGTGCAGTTAGTTTTCTTTATGATCTTGTGAGCAAAGACACAATATTGGTAACTTCTTGGAGTGGTGGGCAGTTACAGATAGATGCTCTGGCTGATGAGATCCAGCCTGTGTGGAGTGCTGGCATTCCTTCACGTCTTCGTGTTGATTCCCACAACCATATCCTTGGCCTTGCCATGATTTGTGAGTCAATAACCAGTGTCTTCCCAGAGAAGCTTGATCATACTGTCTGGTTGGGCAATCCACCGCCACTTCTGAGACTGGCTATTGTTGACTTGGCTTTGCCTCGGAGAGCAGAAAGTGGTTATAATATTTCATTGTTTGTGGATCCTCTTATACCAGAAAGAATATATTCCCTTCATGATGGAGGTATTGATTCAATAGTGTTGCATTTCCTTCCATTCACAAGTCAGGCAAATGGCAAAGGTGATACAATGAGAACTCCTTCTGTGCATCCTGTTCTGAATACATGTCAGAGTGGGAGCACCACAGCATCTCCTCTTTGCGGTTTTGCATCTTTGTCAGATTCCTTTGGATATTCATGGATTGTGGCAGTCACTCTTTCTCAAGAGTGCATCGTGCTAGAGACAAAAACGTGGAACCTGTTGCTGCCACCAAGTGTTGATATGGAGAAAAAACCCAGTCAGTTGGAGGATAAATCAGAAGAGAGAGATATCCCAACCATCATTAGCAAAGAATTACTTAGTGGGCCTAGGACAGTACTTGTACCCCAAGCATCTCCAAGCTTACGTTCTATTTCACCTGATTCAATTGAAGGCAGATCAGCATTGCATCAGTATTTCAAGCTTTTTCATGAAACTTATGTGGAGTATGCACATAAGGTGTACTTGGAACTCAAGCATCATGCTCCTCAGTTGAAGAAAATCGTAGATGACCAACAAGCTCGTTTGGCTGATGCACGGCAGAAGCTTTTGAAAGTTGCGGAGAAGCAGCCCTTATTAGAGAAAAGAATAAAACGTGCAGTTGAAATGCGTAGTTCTTTGGAAGAGCGCTTGCAACAGTTAAGGAACTTAGCTGGTGTTCACAAAATGCCATTATCTAAAGCCGAGCAACAATTCAAGTCTGAGCTCGACCGCTTCAGGGAAGTTGAGTTGGATGCTTTGCATTCTTCTGTTGATGCTCTAGGTGCTAGACTTAGGAGGTACATGCAAGCATCCAAAGCTAATAGTCACCAAAAGCAACTAACAGGTAGGAAGAGTTGTGTTGACAAGGCCCAGATATCGATGCTCAAATCATCGCTTGAAAAACTCTCACTTCTAAATAGTGAGAATTCGAAAAAGGTCAAACTTGTTGAGTCTTCCTTGAGAGCACTGGAAAAAGGTGGCAGGGAATCAAGCCTTCCTAAACCTTGA 3150 0.441 MGSSKEDRFTRILRGFKTLFFLITMIISLLLFSAPIILVLADALLPSALLSALSPSPLSLKSLSSHLQNYDFRNSLIDIPLVSIIRSLVIFCVYSFCDGPRLSRGPYLGITTMCSVSTLIFVSMKAVYVFSLPNSYQGSGHVRAFEIALFVCSCALAIGHIAVAYRTSCRERRKLLVYKIDVEAISACKRYPKISLKEERINPQYNAVTTLYSANYKLSTKLQKAKVGSEVQVTLGWVVAHRVMRIALDAEETNSEPRRSTTPKEEVEWVPLEKHPVFVAANNSIDGDHGVAFSRNLAAWDGSSRLYFWEPKSNCLHRLSLRLGEPEPTSILAASPSKVLRADIEINFAIHKISINRNGSALLLFGSERLCVMYLYGRTSKKDVNLICRTIIIGSHTYSKSGNDIRVLKALWHPHSDCHVGILSSDSVFRLFNLALDPLQPEQEYYLQPVDPGRSRSASSMCPADFSFGGDHLWDRFSVFILFGDGAIYILCPVVPFGSLFKSESVLEIYNDAHIFGLKSANSKAASNSKLAISWLEATFPELQNQETEENMCVMRAHAYAQFDASLTLQGPLRRVGQGGSEDSVGRSAECEGRAVSFLYDLVSKDTILVTSWSGGQLQIDALADEIQPVWSAGIPSRLRVDSHNHILGLAMICESITSVFPEKLDHTVWLGNPPPLLRLAIVDLALPRRAESGYNISLFVDPLIPERIYSLHDGGIDSIVLHFLPFTSQANGKGDTMRTPSVHPVLNTCQSGSTTASPLCGFASLSDSFGYSWIVAVTLSQECIVLETKTWNLLLPPSVDMEKKPSQLEDKSEERDIPTIISKELLSGPRTVLVPQASPSLRSISPDSIEGRSALHQYFKLFHETYVEYAHKVYLELKHHAPQLKKIVDDQQARLADARQKLLKVAEKQPLLEKRIKRAVEMRSSLEERLQQLRNLAGVHKMPLSKAEQQFKSELDRFREVELDALHSSVDALGARLRRYMQASKANSHQKQLTGRKSCVDKAQISMLKSSLEKLSLLNSENSKKVKLVESSLRALEKGGRESSLPKP 1049
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco05g1574 1049 PANTHER NUCLEOPORIN NUP84-RELATED 259 1038 IPR037700 GO:0000055|GO:0000056|GO:0006913|GO:0017056
Acco05g1574 1049 Pfam Nuclear pore component 272 469 IPR019321 -
Acco05g1574 1049 Pfam Nuclear pore component 696 1030 IPR019321 -
Acco05g1574 1049 Coils Coil 917 937 - -
Acco05g1574 1049 Coils Coil 882 909 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco05g1574 Acco-ChrAcco05 32033725 32046424 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco05g1574 14 189 Miscellaneous Gene Families AT1G80280 41.711 4.46e-33 135
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco05g1574 05 32033725 32046424 Acco05g1574 05 32033725 32046424 CCT
Acco05g1574 05 32033725 32046424 Acco05g1574 05 32033725 32046424 ECH