Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco05g1487 ATGGGTGACTTCAAGCCTTTCTCAGACTCGGGTTCGGCCTCAGTTTCACTGTCAATTAGCGAGACTGTTAATGGGTCGCACCAATTTACCATAAAGGGGTATTCTTTGGCCAAAGGGATGGGCGCTGGGAGGTATATAATGAGCGACACATTTAGCGTTGGTGGCTACGATTGGGCAATTTATTTCTACCCTGATGGGAAGAACCCAGAGGATAATTCCATATATGTTTCGGTTTTTATAGCCTTGGCGAGCGAAGGAACTGACGTTAGGGCTTTGTTCAAGTTGACTTTGATCGACCAGAGTGGGAAAGGCAACGATAAAGTGCACAGTCATTTTGATCGCCCGTTGGAGAGTGGACCTTATACATTGAAGTATAGAGGCAGCATGTGGGGTTACAAGCGTTTTTTCAAAAGAACATCATTGGAAAATTCAGAGTATCTGAAAGACGATTGCCTTGTCATGCATTGCACTGTTGGTGTTGTGAGAACTCGTTTTGAGGGAACTAAGCAGAATGTTATTATACTACAATGTGGCATGGGTGAGGATTTTAAGGGTTTGTTAGAATCTGAAGTTGGTTGTGACATAGTTTTTAAAGTTGGGAATGAAAGCTTCAAAGCTCATAAGTTGATACTTGCTGCCCGATCTCCTGTCTTTAGAGCTCAGTTTTTTGGATTTGTTGGTGATACCAGTAGGCATGAAGTGGTGTTAGAGGATATTGAGCCTTTTATCTTCAAGGCAATGCTTCTCTACATCTATACAGATAAACTTCCTGACATCCATGAGGTTATGGGCTCAATACCTGTTTGCTCACAGACTGTCATGTTGCAACATCTATTGGTCGCTGCTGATCTGTATAGTCTTGATCGGCTGAAAATGTTATGTGAATCAATTTTATGTGAAGAAATCAATACTAACACTGTAGCAACATCACTTGCACTGGCTGAGCAACATCACTGCCCACACCTTAAGGACTCTTGTTTAAAATTTGTTGCACATCCAGCAAATTTAGGAGTGGTAATGCAGTCCGAAGCCTTCATACACTTGAAGGAGAGCTGCCCTTCAATGTTGTCAGAGTTGCTGGAGACATTTGCATTGGTGGAAGATACATTGAGCAGGAAGAGGAGCAGCAGTAGCGTATATGGGCAAGAGGTAACTGATGGGATGGCCGAAGCATCAACTAATCCAAGCGGCAGGCATTTCAAGAGGCGGATGTAG 1215 0.4321 MGDFKPFSDSGSASVSLSISETVNGSHQFTIKGYSLAKGMGAGRYIMSDTFSVGGYDWAIYFYPDGKNPEDNSIYVSVFIALASEGTDVRALFKLTLIDQSGKGNDKVHSHFDRPLESGPYTLKYRGSMWGYKRFFKRTSLENSEYLKDDCLVMHCTVGVVRTRFEGTKQNVIILQCGMGEDFKGLLESEVGCDIVFKVGNESFKAHKLILAARSPVFRAQFFGFVGDTSRHEVVLEDIEPFIFKAMLLYIYTDKLPDIHEVMGSIPVCSQTVMLQHLLVAADLYSLDRLKMLCESILCEEINTNTVATSLALAEQHHCPHLKDSCLKFVAHPANLGVVMQSEAFIHLKESCPSMLSELLETFALVEDTLSRKRSSSSVYGQEVTDGMAEASTNPSGRHFKRRM 404
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco05g1487 404 Gene3D - 304 378 - -
Acco05g1487 404 FunFam BTB-POZ and math domain 1 170 296 - -
Acco05g1487 404 CDD MATH 25 158 IPR002083 GO:0005515
Acco05g1487 404 CDD BACK_AtBPM-like 299 362 IPR034090 -
Acco05g1487 404 CDD BTB_POZ_BPM_plant 179 299 - -
Acco05g1487 404 SUPERFAMILY TRAF domain-like 21 160 - -
Acco05g1487 404 Gene3D Potassium Channel Kv1.1; Chain A 176 303 IPR011333 -
Acco05g1487 404 ProSiteProfiles BTB domain profile. 193 256 IPR000210 GO:0005515
Acco05g1487 404 Gene3D Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A 23 162 IPR008974 GO:0005515
Acco05g1487 404 ProSiteProfiles MATH/TRAF domain profile. 24 158 IPR002083 GO:0005515
Acco05g1487 404 PANTHER BTB/POZ AND MATH DOMAIN-CONTAINING PROTEIN 1 18 360 IPR045005 GO:0016567
Acco05g1487 404 SUPERFAMILY POZ domain 179 300 IPR011333 -
Acco05g1487 404 SMART math_3 29 141 IPR002083 GO:0005515
Acco05g1487 404 Pfam BTB/POZ domain 183 300 IPR000210 GO:0005515
Acco05g1487 404 SMART BTB_4 193 302 IPR000210 GO:0005515
Acco05g1487 404 MobiDBLite consensus disorder prediction 381 404 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco05g1487 Acco-ChrAcco05 30773968 30778763 Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco05g1487 05 30773968 30778763 Acco05g1487 05 30773968 30778763 ECH