Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco05g1424 ATGCCTCATTCAGTTCAGCCTTCGTTTTCACTTCCTTCAGTCCAGCCTCAGGCCCTGGTCCCTGGTCCGTCTTCGTCTGGGGCTGGACCATCTACCTATGCTCAGCTCAATTCGCCGGAACCTTCTGGCACTCGTATTCCAGAGCATTTGATGCACAAAAATAGGTTACAAGAGTATGCTCAAAGGTCAAACATGCCTCTGCCTATTTATCACACTCCCAATGAAGGATCTTCTCATGCTCCGAAATTTAGGTCGACGGTGTTGGTAGACGGGAAGTACCATATTTCTAAAAATGTTTTTTCTGTCCGAAAAGCTGCTGAGCAAGACGTTGCCAAACTTGCATATGAGCAGATACTGACAAAGATCAAAGATGAAGGGCTTCCTGATATTTTTGAGAAAACTATGTTTTTCAAATCCATCTTAAATGAATTTGCTGCCAAGATGAATCTGGAAAGAGTTACGTACCACACTGTTCAGCAGGAAGGACTTCTACTTTTTGTATCATCTTTGGTTTTCAATGGCAAATCCTACGTTGGTGATCCAGCCAGAAGCAAAAAGGAGGCTGAGCAATTGGCTGCACGAACGGCCATTCTTTCGAATCTAAATGATTCTAGGTTTGCAACACGTCTTTCTGAGGTAATAAACTCAAAATTCAAATTTTGTGCTGCAATGAACAATGTGAAGGACTTACAACATGCAAGTACTGTTTCACATATGGCTAGCTCAGGACCTGTGTCTGTTAGTGCAACTCCTGTGACAATTAATAATAATGAAAGTAGCAACAAATTTGAGGTCACACTTCCTGAACCCTCTTCTAGAGGGCTTCAACAAGAATTCTTGATGTCAAATCAAGAAAAGTGCCCTGAGGAGTCCAAACTTTCAGATCTGTCTCAGCAAGCAGGTGAACCACAGCATCTTGATGATGGTTCAAGTTTGAAGAAGCGCAAAAAGAACAGGAAAAAGGCTAATAAGAAGCCTCGGATGGATTCTCTGCCGCCAGTTGCGGCATGTCCGCTCAGCCAAGGCCCTCCTCCTGTTGCTGCATTTCCGCCCAAACAAGCCCCTCCTCCTGTTGCATCACCATTTCTTTTCAGCCAACCTAGCTGTTCTGCGACGCAGTAA 1122 0.4421 MPHSVQPSFSLPSVQPQALVPGPSSSGAGPSTYAQLNSPEPSGTRIPEHLMHKNRLQEYAQRSNMPLPIYHTPNEGSSHAPKFRSTVLVDGKYHISKNVFSVRKAAEQDVAKLAYEQILTKIKDEGLPDIFEKTMFFKSILNEFAAKMNLERVTYHTVQQEGLLLFVSSLVFNGKSYVGDPARSKKEAEQLAARTAILSNLNDSRFATRLSEVINSKFKFCAAMNNVKDLQHASTVSHMASSGPVSVSATPVTINNNESSNKFEVTLPEPSSRGLQQEFLMSNQEKCPEESKLSDLSQQAGEPQHLDDGSSLKKRKKNRKKANKKPRMDSLPPVAACPLSQGPPPVAAFPPKQAPPPVASPFLFSQPSCSATQ 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco05g1424 373 MobiDBLite consensus disorder prediction 1 42 - -
Acco05g1424 373 SUPERFAMILY dsRNA-binding domain-like 52 118 - -
Acco05g1424 373 CDD DSRM_SF 142 197 - -
Acco05g1424 373 MobiDBLite consensus disorder prediction 337 362 - -
Acco05g1424 373 SUPERFAMILY dsRNA-binding domain-like 131 198 - -
Acco05g1424 373 Gene3D - 49 118 - -
Acco05g1424 373 ProSiteProfiles Double stranded RNA-binding domain (dsRBD) profile. 136 197 IPR014720 -
Acco05g1424 373 Pfam Double-stranded RNA binding motif 138 197 IPR014720 -
Acco05g1424 373 Pfam Double-stranded RNA binding motif 53 117 IPR014720 -
Acco05g1424 373 MobiDBLite consensus disorder prediction 1 46 - -
Acco05g1424 373 ProSiteProfiles Double stranded RNA-binding domain (dsRBD) profile. 51 120 IPR014720 -
Acco05g1424 373 Gene3D - 119 207 - -
Acco05g1424 373 PANTHER RIBONUCLEASE III 50 323 IPR011907 GO:0003723|GO:0004525|GO:0006364
Acco05g1424 373 SMART DRBM_3 52 119 IPR014720 -
Acco05g1424 373 SMART DRBM_3 137 201 IPR014720 -
Acco05g1424 373 MobiDBLite consensus disorder prediction 283 373 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco05g1424 Acco-ChrAcco05 29941780 29945615 Dispersed/Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco05g1424 05 29941780 29945615 Acco05g1424 05 29941780 29945615 CCT
Acco05g1424 05 29941780 29945615 Acco05g1424 05 29941780 29945615 ECH