Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco05g1386 ATGGCTTTGCATTTTCTTCTGCTGCTTCTAACAACACTTCTTGGCGCTGCTACCGCTGATGATGGACCGTTTATTGGTGTGAACATTGGGACAGATCTCTCAGACATGCCACACCCAACACAAGTTGTAGCACTACTTAAAGCACAGCAAATCCGGCATGTTCGGTTGTATGATGCTGATCAAGCTATGCTTATTGCACTTGCCAAGTCAGGCATTGAAGTTGTTGTATCGGTCCCTAATGAAGAGCTTCTAGCAATAGGCCAATCGAACTCCACGGCAGCTAACTGGGTTTCGCGCAATGTGGTGGCACATTACCCGGCCACCAACATCACGGCCATTTGTGTTGGCTCTGAGGTCCTGACCACCCTCCCAAATGCAGCCAAAATCCTTGTCAATGCCATTAAGTACATTCATTCAGCCCTCGTGGCAACAAACCTCGATCGCCAAATCAAAGTTACAACCCCACTTCCTTCCAACATCATCCTTGACTCATTCCCTCCTTCCCAGGCCTTTTTCAATCGATCCATGAACTATATTTTGGTCCCATTGCTTGATTTCTTGCAATCCACCGACTCTTTCCTCGCGCTTAACGTGTATCCTTACTATGATTACATGAAGTCCAATGGTGTGATTCCATTAGAGTATGCACTCTTCAAGCCTCTCCCTCCAAACAAAGAAGCTGTGGACTCCAACACTCTCCTTCACTACTCCAATGTCTTTGATGCGGTGGTTGATGCAGCCTACTTCGCCATGTCCTTTCTGAACTACACTAACATTCCTGTGGTGGTGACAGAGTCGGGCTGGCCCTCAAGGGGCGATTCGAATGAGCCTGATGCTACGGTTGACAATGCTAATACTTATAACAGTAATTTGATCAAGCATGTGCTGAACAAAACTGGAACTCCCAAACATCCTGGGATTGCTGTTAGTACATACATCTATGAGCTGTACAATGAGGATACCAAGCCCGGGCTGGTGTCAGAGAAGAATTGGGGATTGTTTGATGCGAATGGGGAACCTATTTATATTTTGCACTTGACAGGATCAGGAGCTGTTTTGGCTAATGATACCACTAATCAAACTTTTTGCATTGCAAAAGATGGTGCTGACCCTAAGATGGTGCAGGCTGCACTAGATTGGGCATGTGGACCTGGGAAAGTGGATTGCTCTGACTTGCTTCAGGGACAGCCTTGTTATGAACCAGACAACGTGCTTGCTCATGCGACTTATGCTTTCGACACGTACTATACTAAGATGGGGAAGTCTTCTGAGGCATGTGATTTCAATGGAGTGGCTACTATCTCTACCACAGATCCAAGTCATGGTTCGTGTATGTTTCCAGGAAGTCGGGGAAGGAATGGCACCTTATCAAACATAACAGCACCATCAATGAATTCCACAAGTTCAGATTCTTCTGCCAGCGATTTCCACGGCTCTGAACTGATGAGAATCAGAAGCATTTTAATGGTGATAAGATTCTTAGTATGGGGGCTGGTTGTTTTGTAA 1506 0.4595 MALHFLLLLLTTLLGAATADDGPFIGVNIGTDLSDMPHPTQVVALLKAQQIRHVRLYDADQAMLIALAKSGIEVVVSVPNEELLAIGQSNSTAANWVSRNVVAHYPATNITAICVGSEVLTTLPNAAKILVNAIKYIHSALVATNLDRQIKVTTPLPSNIILDSFPPSQAFFNRSMNYILVPLLDFLQSTDSFLALNVYPYYDYMKSNGVIPLEYALFKPLPPNKEAVDSNTLLHYSNVFDAVVDAAYFAMSFLNYTNIPVVVTESGWPSRGDSNEPDATVDNANTYNSNLIKHVLNKTGTPKHPGIAVSTYIYELYNEDTKPGLVSEKNWGLFDANGEPIYILHLTGSGAVLANDTTNQTFCIAKDGADPKMVQAALDWACGPGKVDCSDLLQGQPCYEPDNVLAHATYAFDTYYTKMGKSSEACDFNGVATISTTDPSHGSCMFPGSRGRNGTLSNITAPSMNSTSSDSSASDFHGSELMRIRSILMVIRFLVWGLVVL 501
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco05g1386 501 FunFam Glucan endo-1,3-beta-glucosidase 4 356 450 - -
Acco05g1386 501 Pfam X8 domain 362 433 IPR012946 -
Acco05g1386 501 Pfam Glycosyl hydrolases family 17 25 344 IPR000490 GO:0004553|GO:0005975
Acco05g1386 501 ProSitePatterns Glycosyl hydrolases family 17 signature. 259 272 IPR000490 GO:0004553|GO:0005975
Acco05g1386 501 SMART X8_cls 361 446 IPR012946 -
Acco05g1386 501 Gene3D - 355 450 - -
Acco05g1386 501 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE BG1-RELATED-RELATED 11 434 IPR044965 GO:0004553|GO:0005975
Acco05g1386 501 Gene3D Glycosidases 24 350 - -
Acco05g1386 501 FunFam Glucan endo-1,3-beta-glucosidase 3 24 349 - -
Acco05g1386 501 SUPERFAMILY (Trans)glycosidases 25 344 IPR017853 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco05g1386 Acco-ChrAcco05 29332954 29335700 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco05g1386 19 491 Glycoside Hydrolase AT1G66250 73.684 0.0 741
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco05g1386 05 29332954 29335700 Acco05g1386 05 29332954 29335700 CCT
Acco05g1386 05 29332954 29335700 Acco05g1386 05 29332954 29335700 ECH