Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco05g1229 ATGGAGGATCTGAAGCCAGGCCCTGCAAATACTCCTCCACTGACAACGTTACGGTTTCTTGATAGAGCCGCCACCGTCTACGGTGACTGCACTTCTATCATTTATAACAACACCACTTTCACTTGGTCCCAAACCCACCGTCGCTGTCTTCAACTAGCTTCCTCTCTCTCCTCCATCGGAATCAGTCGTGGTGATGTTGTTTCCGTCGTCGCCCCTAACGTTCCTGCTATGTATGAGCTCCAATTCGCAGTTCCCTTCGCCGGCGCCATCCTCAACAACATCAACACCCGCCTCGACACTCGCACCATCTCCGTCATCCTCAGCCACGGTGAATCCAAGCTCGTGTTCGTCGATTGTGTCTCACGTTCTTTAGTCCTCGATGCCATCTCATTGCTACCTCCGGAGACTCAAAAGCCTATACTTATCCTCATGACTGACGACTCAGTGGAACTCATCACATCATCAGAGGGCTTCTATGATACGTACGAAGGCTTGGTTGCGAAGGGTAATCCGAATTTCCAGTGGATCCGACCCGAAAGTGAGTGGGATCCGATGATCTTGAATTACACATCAGGAACGACGTCTTCTCCCAAGGGTGTGGTTCATTGCCACCGAGGGGCATTCATCATGACGGTAGATTCTCTTATCGACTGGGCCGTTCCAAAACAACCAGTCTACCTCTGGACGCTGAATATGTTCCACGCTAATGGGTGGAGCTACCCGTGGGGGATGGCTGCCGTCGGCGGAACCAATATCTGCGTCAGAAAATTCAATGCCGCCACTGTGTTTAATCTGATCGAACGCCATGGTGTCACCCACATGTGCGCTGCACCAGTGGTGCTCAACATGTTAACAAACTTCCCTAGGGGAAATCCTCTAACAAGTCCCGTGCAAGTCCTCACTGCGGGATCGCCGCCCCCAGCTGCAGTGCTGCTTCGAACGGAAGCGTTAGGATTTGTAGTGAGTCACGGGTATGGGTTAACGGAAACCGGAGGGTTGCCAGTTTCGTATGGGTACTTAGAGTTAAAAGATCGATCCAAGGACGTGATCATTAGTGGTGGTGAAAATCTGAGCAGCGTAGAGGTCGAATCGGTACTGTACAGCAACCCAGCAGTGAACGAGGCGGCCGTGGTGGCGAGACCGGACGAGTTCTGGGGAGAGACGCCGTGTGCATTCGTGAGCCTGAGGGAGGGGTTGGAGAAGAAGCCGACAGAGAAGGAGATAATAGAGTATTGCAGGGCAGATTTACCGCATTTCATGGCACCGAAAACGGTGGTGTTCAAGGAAGATCTTCCAAAGACTTCGACGGGGAAGATTCAAAAGTACGTTTTGAGAAAGGAAGCAAAAGATATGGGATCACTGAAAGCGGGGAAAGAAGGAAGCATCTTCGTTTGGTTCGTCTCCATGGCAAGTCAATCGGTGACGGTGGCAACAAGCATTGGAGGTTCCTCCCGTGAGACTTCAGCAGGTGACGGAAGAAAGGTGTTCAATGTTGGCGAAATAGGGGATTGGAACGAGGTCGATGGTTTTGATTCCAAGGTGCATCAAGCTTCCTCTAGCGAATTGACTCCACGATGCTTCATTTATGCAAGCGAAGGAGAAGGGGATTGA 1611 0.5133 MEDLKPGPANTPPLTTLRFLDRAATVYGDCTSIIYNNTTFTWSQTHRRCLQLASSLSSIGISRGDVVSVVAPNVPAMYELQFAVPFAGAILNNINTRLDTRTISVILSHGESKLVFVDCVSRSLVLDAISLLPPETQKPILILMTDDSVELITSSEGFYDTYEGLVAKGNPNFQWIRPESEWDPMILNYTSGTTSSPKGVVHCHRGAFIMTVDSLIDWAVPKQPVYLWTLNMFHANGWSYPWGMAAVGGTNICVRKFNAATVFNLIERHGVTHMCAAPVVLNMLTNFPRGNPLTSPVQVLTAGSPPPAAVLLRTEALGFVVSHGYGLTETGGLPVSYGYLELKDRSKDVIISGGENLSSVEVESVLYSNPAVNEAAVVARPDEFWGETPCAFVSLREGLEKKPTEKEIIEYCRADLPHFMAPKTVVFKEDLPKTSTGKIQKYVLRKEAKDMGSLKAGKEGSIFVWFVSMASQSVTVATSIGGSSRETSAGDGRKVFNVGEIGDWNEVDGFDSKVHQASSSELTPRCFIYASEGEGD 536
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco05g1229 536 PANTHER ACYL-ACTIVATING ENZYME 4 333 - -
Acco05g1229 536 Pfam AMP-binding enzyme C-terminal domain 361 438 IPR025110 -
Acco05g1229 536 SUPERFAMILY Acetyl-CoA synthetase-like 11 451 - -
Acco05g1229 536 FunFam 2,3-dihydroxybenzoate-AMP ligase 347 452 - -
Acco05g1229 536 Gene3D - 42 203 - -
Acco05g1229 536 ProSitePatterns Putative AMP-binding domain signature. 187 198 IPR020845 -
Acco05g1229 536 Gene3D - 347 452 IPR045851 -
Acco05g1229 536 Pfam AMP-binding enzyme 21 335 IPR000873 -
Acco05g1229 536 Gene3D - 39 331 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco05g1229 Acco-ChrAcco05 25406708 25409701 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco05g1229 338 451 EF-hand Containing Proteins AT1G21540 64.706 2.07e-43 160
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco05g1229 05 25406708 25409701 Acco05g1229 05 25406708 25409701 ECH