Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco05g1030 ATGGCGCCTGTGAGAACCACAGGCGCTATTGTCGGCGTGGCTGCCATTTTCGTTTCAGTAGCTTTCTCCTTTTACATATGCGATCGTCGTTCTAAATCTTCCTCCCTAAAGACACGCTCAACTTCATCAAAGAAGAAATCCAGGATGGGGCTCGTTGATGCCATTGGGAACACACCTTTAATTCGAATTAACAGCCTCTCTGATGCCACGGGTTGTGAAATTTTTGGGAAGTGCGAGTTTTTGAACCCTGGAGGGAGTGTGAAAGACCGAGTTGCAGTGAAAATCATTGAAGAGGCTTTATCCTCTGGCCAGCTACGCCCAGGTGGAATAGTTACGGAAGGGAGTGTTGGAAGCACTGCCGTTAGCCTTGCCACTGTCGCACCTGCCTACGGATGCAAATGCCATTTAGTTATCCCTGATGATGTTGCAATTGAAAAGGCTCAGATAATTGAAGCTCTAGGAGCTACTGTTGAAAAAGTTAGGCCAGTGTCAATCACTCACAAGGATCATTTTGTAAATGTTGCGAGAAGACGGGCATCAGAAGCAAATAAATTGATGTTAGAACAAAGAAATAAATCACAATTGAATGGCGGAAGCATTGAACCGATTAATGGTTACAGATCTGATGAAGATAGACACAGTTCAGCTCTTTCTATGGATTGTCAAGGCGGCTTCTTTGCTGATCAGTTTGAGAATTTGTCAAACTTCAGGGCTCACTTTGAGGGTACAGGACCTGAGATTTGGGAACAAACAAATGGAAAGTTGGATGCATTTGTTGCAGGAGCCGGCACTGGTGGCACTTTGGCTGGTGTTTCTGGGTTTCTTCAGGAAAAGAATACAAAAATCAAGTGCTTCCTTATAGATCCTCCTGGTTCTGGTTTGTTCTTTAAGGTAACAAGGGGGGTGATGTACACCAAACAAGAAGCTGAAGGAAAAAGACTCAAGAATCCATTTGATACCATAACAGAAGGAATTGGATGTAATAGGATTACAAAGAATTTTATGATGGCAAAAGTTGATGGCGCTTTTCAAGCCACAGATATTGAGGCTGTTGAAATGTCTAGGTTTCTTCTGAAGAACGATGGCCTATTTCTTGGTAGTTCTTCAGCAATGAATTGTGTTGGAGCAGTTAGAGTGGCACAGTCGCTGGGACCTGGTCATACAATTGTAACCATTCTCTGTGACAGTGGAATGAGACATCTGAGTAGGTTCCACAATCTTCAATACCTGTCTCAGCTTGGTTTGACTCCTAAAGCAACTGGGTTAGAGTTTCTGGGTATCAAATGA 1287 0.4343 MAPVRTTGAIVGVAAIFVSVAFSFYICDRRSKSSSLKTRSTSSKKKSRMGLVDAIGNTPLIRINSLSDATGCEIFGKCEFLNPGGSVKDRVAVKIIEEALSSGQLRPGGIVTEGSVGSTAVSLATVAPAYGCKCHLVIPDDVAIEKAQIIEALGATVEKVRPVSITHKDHFVNVARRRASEANKLMLEQRNKSQLNGGSIEPINGYRSDEDRHSSALSMDCQGGFFADQFENLSNFRAHFEGTGPEIWEQTNGKLDAFVAGAGTGGTLAGVSGFLQEKNTKIKCFLIDPPGSGLFFKVTRGVMYTKQEAEGKRLKNPFDTITEGIGCNRITKNFMMAKVDGAFQATDIEAVEMSRFLLKNDGLFLGSSSAMNCVGAVRVAQSLGPGHTIVTILCDSGMRHLSRFHNLQYLSQLGLTPKATGLEFLGIK 428
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco05g1030 428 CDD CBS_like 56 402 - -
Acco05g1030 428 Pfam Pyridoxal-phosphate dependent enzyme 53 395 IPR001926 -
Acco05g1030 428 Gene3D - 89 231 IPR036052 -
Acco05g1030 428 SUPERFAMILY Tryptophan synthase beta subunit-like PLP-dependent enzymes 48 407 IPR036052 -
Acco05g1030 428 FunFam Cysteine synthase, putative 55 84 - -
Acco05g1030 428 ProSitePatterns Cysteine synthase/cystathionine beta-synthase P-phosphate attachment site. 77 95 IPR001216 GO:0006535
Acco05g1030 428 PANTHER CYSTATHIONINE BETA-SYNTHASE 51 407 - -
Acco05g1030 428 FunFam Cysteine synthase 237 401 - -
Acco05g1030 428 Gene3D - 54 402 IPR036052 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco05g1030 Acco-ChrAcco05 21396598 21400449 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco05g1030 55 402 Miscellaneous Gene Families AT3G04940 30.286 5.18e-35 130
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco05g1030 05 21396598 21400449 Acco05g1030 05 21396598 21400449 ECH