Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco05g0893 ATGGTAACGCTGATTCGCCCAAAAAAAAAAAAAAACACAAAAACTACAAATACGGAAGAGTACAGGCCGGCGGCGATCTGCCCAGTCCGTTTGAACCCTTTCTGCTCCCTTCTCCAATCAGAGGAGAAGAAATCTGAAGGCATAGACATGTTTGGGGTCATAAGGCGAAGAGTTGCTTCTGGCAGCTCGTCTCTTCTGTTTCAGGGTCTCTCATTTCAGAAAGTTCGGCCAAACCAATTACTGCCAAGTCGATTTTCTTCCATTTTGGAGAAAGAGATCATATATCTTTCTGGAGGATGTCAGAGTGTTCGGAATATCTGTCACTCAAGCTCAAGTGGGTGCTGGAGCAATTTAAAGCCCATGAGAGACTTGTATCATCAAGAGATTACAAGGCAAACATGGAGGCGCTCCTTTTCTTCAGATAATGGAGATCTAGTTGATGTTGTGGTCCCTCCATTAGCTGAATCCATCGCTGATGGCACTCTAGCGACCTTTTTGAAAAAACCAGGTGATAGTGTTAAAGTTGATGAACCGATCGCACAAATTGAGACAGATAAGGTGACAATTGATGTTACCAGTCCTGAGTCTGGCGTGATTCAGAAGCTTCTAGCCAATGAAGGGGATACTGTTGAACCTGGTAATAAGATAGCAATCATTTCAAGGTCTGCTGAAGCCACAACTCATGTTGCCCCATCTGAAAGCGTATCTGAGAAACCTGCTCCTCAGCCAACCCAAAAGATCAAAGAGGAGACAAAGGCACCCAAAGTTGAAGCTGCCCCTACAACAGAGAAGCCTAAAGCCCCCTCTCCTCCACAGCACTCTCCCACAGAACCACAGCTTCCCCCTAAGGAAAGAGAGAGACGTGTCCCTATGACAAGACTTCGAAAGCGGGTTGCTACTCGGTTGAAAGATTCCCAAAATACCTTTGCATTGCTGACAACATTCAATGAAGTTGACATGACTAACTTGATGAAGCTCCGTGCTGATTATAAGGATGTTTTTGTTGAAAAGCATGGAGTCAAATTGGGACTAATGTCTGGGTTTGTTAAAGCTGCTGTGAATGCACTCCAGCATCAGCCAATAGTGAATGCTGTAATTGATGGTGATGATATAATATACAGAGATTATATAGATGTCAGCGTAGCTGTTGGCACTTCAAAGGGCCTCGTTGTACCAGTTATTCGTAATGCTGATAAGTTGAACTTTGCGGAAATAGAAAAGGAGATAAACAATTTTGCGAAAAAGGCAAATAATGGAACTTTATCAATTGATGAGATGGCTGGAGGCACTCTTACAATATCAAATGGCGGTGTTTATGGGAGCCTTTTGAGTACCCCTATAATCAATCCCCCTCAGTCCGCAATTTTGGGTATGCACTCTATAGTGACCCGTCCAATGGTGGTTGGAGGTCAAGTAGTACCAAGGCCGATGATGTATGTTGCTCTAACATATGATCATAGGTTGATTGATGGAAGAGAGGCAGTGTTCTTTTTGCGTCGAATTAAAGATGTTATTGAGGATCCTCGGAGGCTTCTGCTTGACATATGA 1548 0.4367 MVTLIRPKKKKNTKTTNTEEYRPAAICPVRLNPFCSLLQSEEKKSEGIDMFGVIRRRVASGSSSLLFQGLSFQKVRPNQLLPSRFSSILEKEIIYLSGGCQSVRNICHSSSSGCWSNLKPMRDLYHQEITRQTWRRSFSSDNGDLVDVVVPPLAESIADGTLATFLKKPGDSVKVDEPIAQIETDKVTIDVTSPESGVIQKLLANEGDTVEPGNKIAIISRSAEATTHVAPSESVSEKPAPQPTQKIKEETKAPKVEAAPTTEKPKAPSPPQHSPTEPQLPPKERERRVPMTRLRKRVATRLKDSQNTFALLTTFNEVDMTNLMKLRADYKDVFVEKHGVKLGLMSGFVKAAVNALQHQPIVNAVIDGDDIIYRDYIDVSVAVGTSKGLVVPVIRNADKLNFAEIEKEINNFAKKANNGTLSIDEMAGGTLTISNGGVYGSLLSTPIINPPQSAILGMHSIVTRPMVVGGQVVPRPMMYVALTYDHRLIDGREAVFFLRRIKDVIEDPRRLLLDI 515
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco05g0893 515 NCBIfam dihydrolipoyllysine-residue succinyltransferase 251 514 IPR006255 GO:0004149|GO:0006099|GO:0045252
Acco05g0893 515 ProSitePatterns 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 170 199 IPR003016 -
Acco05g0893 515 MobiDBLite consensus disorder prediction 225 241 - -
Acco05g0893 515 SUPERFAMILY Single hybrid motif 145 232 IPR011053 -
Acco05g0893 515 Gene3D - 271 511 IPR023213 -
Acco05g0893 515 ProSiteProfiles Biotinyl/lipoyl domain profile. 145 220 IPR000089 -
Acco05g0893 515 Pfam Biotin-requiring enzyme 147 219 IPR000089 -
Acco05g0893 515 FunFam Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex, mitochondrial 278 513 - -
Acco05g0893 515 MobiDBLite consensus disorder prediction 264 278 - -
Acco05g0893 515 SUPERFAMILY CoA-dependent acyltransferases 285 514 - -
Acco05g0893 515 MobiDBLite consensus disorder prediction 243 259 - -
Acco05g0893 515 CDD lipoyl_domain 146 219 - -
Acco05g0893 515 Gene3D - 145 222 - -
Acco05g0893 515 PANTHER DIHYDROLIPOYLLYSINE-RESIDUE SUCCINYLTRANSFERASE COMPONENT OF 2-OXOGLUTARATE DEHYDROGENASE COMPLEX, MITOCHONDRIAL-RELATED 116 514 - -
Acco05g0893 515 Pfam 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 285 513 IPR001078 GO:0016746
Acco05g0893 515 MobiDBLite consensus disorder prediction 223 291 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco05g0893 Acco-ChrAcco05 17253591 17274659 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco05g0893 124 513 Acyl Lipid Metabolism Gene Families AT3G13930 29.075 7.26e-38 144
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco05g0893 05 17253591 17274659 Acco05g0893 05 17253591 17274659 ECH