Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco05g0890 ATGGAGACGCTGTCTTTTGTTTCCAAAGCGAGGACTGCGCTTCATTCTGCGGCTGCAAAAGCCGAACGCGTTCTATCGGACTTGAAATCTGATCGAGATCCTGATAAACAATCACCTAACAACTTGAGAAGCGAAGAAAAAGACGAATCTCCTCGGATTGAGGGCGAGTCTAAGCTGCGCAGCGATTTGAAAAAGTGGAGACCTCCACACATAAGCATAAAGCAGGATTGGCAAGATAAAATAAAAAACATTCGAATAGGGAGAAAGGAGGTTGAAGATACAGATAAAGTTGGAGATACAGCGATGACTTTTCCAATCTATGATGAAAATCTATACATCCTGAATATGAAAAATGATATTGACACCAAGGCTTCTGAAGCAACACCAACCGTTGAAGGCTTGATTGCTGCAACAAAAGACCCCATTCCTCCATCATCTGTGCTGAGGCAGTTGGCAGTAGCTGTGGAGGATGGGAGGAGAGCAAGCTCAGTTAAAGATTTTACAGCTTCATCAGCAAATTCTTCTCCCGCTGGAGATAAGGGGGGCTTAAGTCTCCAAGCAGTGAAGGCCTTAGTGCTGGGTGGAAAGGAGGACAAAGTTCCGATTCACTTCACTAAAGATGAAAAATTTGGTTTTTTGATTAATTCTCTGTTTGATCCAGAGGGAGAATTCCTCAAAAGGAAGATCAACTCTAATTCAGAGAAAAATTCCGTAGCATCTTTGGCAAGAGATATTCATGGTGCCCCTCCAGAAAGCATAGTTGTTAAGCTAGCTGAAATCATTGGAAACTTCAGATGCCTTCAAAAAATGGCTTTGTTTTGGTGCAGGGTTGTTGTTGAACTGAAAAAACTTTGGTCTGAGGAGCAACATATTCCTGGAGTGCCCCTGGATGAGATTCCAGATCTTAAGTTGTGTCTTCTATATCAACAATTTCAAGTACTTAATTGTTGCATCTCTCGGAAAAGGCGCCGTTATATTGCTGCTGAATCTCTGGACTCATTGATGGAAGGCAGTTCAATTACTAAAGAATCAAAGGACCATCGTGATAGCATTCCTAAAGCCCCTTTCTTATATGCTAGATTAAATACAGGGGAGCTCGTTCTTCGACTTGGTGCTGATTGCCCATCAGGGAATGTGACATTGCTAGAAACTGGTGAGCCTGTGTACTCTCCGGTCATGCAGGAAGGACCTTTGCTCACAGAAGATCTAATCAAAGAAACAGAAGAGTTTGTGCTGCGGACTGGGAGTGTTGGCGCTGGGTGCTCTCAACTTCTCTCAGATATGCAGGCTTTCAAGGCTGCCAACCCTGGTTGTATTTTGGAAGATTTTGTGAGATGGCACTCTCCTCCTGATTGGTCAGAATGTGAACTAGATACTGAGGCTAAAGATTCTTCTGATGGTGGTGACTCTGGTGAGTCATTGTCTACCAGAGGTCACCTAAGTCAGCGAATGCAAAAAGAAGGTAATTTGTGGCGTGAACTCTGGGCTACATCTAAACCTGTACCAGCTGTTAAACAGACACCTCTATTTGATGAGGATTTGGCAGTGGAGGGCATCCTACATGCTTTTGAGGACATTCAGCCTTCTGAACTTTTTAAACAATTGTTTGTTTCTTTGCTTGGTTTAGGAGTTACAATAGCAGAGCCCTTGCTGTCTGGTAGCAGTGATTTCTCAAAGTTGTTCTCCGACTGCAAGGAGTACATAGTTGTCAGCTGTCAAAGCAGCAGTTGGAGTGACAGACTTGATGAACTTTGCCAGGTATATCAAACTGTGGAAACAATGTTAACAAATCCTGAGGAAGCACTAATGATGATCAAGCAGGAAGATGAATCAGCTAAAACTAGCGGCGAACTGAGGCGTCGGTTCAAGGGGTTAAACTTTATCTTTCGTGGCAAAGAAAAACCTGGGAGAAAACCTGGATCTGAAGACTTGGTAGACCCTGAAGACAACTCGCTTCGGCAATCCTTCTCGAGTTTCTTCGACAGCAAGTCATCTGTATTTTCAAAGAAATCTTCTAAATTCCAAGACATTTCCCCAGGAGGGAAATCTCCCACTCCTGAAAATAATCAGGCAGTCGTTTCGGCAAAGCTCTCATGA 2097 0.4344 METLSFVSKARTALHSAAAKAERVLSDLKSDRDPDKQSPNNLRSEEKDESPRIEGESKLRSDLKKWRPPHISIKQDWQDKIKNIRIGRKEVEDTDKVGDTAMTFPIYDENLYILNMKNDIDTKASEATPTVEGLIAATKDPIPPSSVLRQLAVAVEDGRRASSVKDFTASSANSSPAGDKGGLSLQAVKALVLGGKEDKVPIHFTKDEKFGFLINSLFDPEGEFLKRKINSNSEKNSVASLARDIHGAPPESIVVKLAEIIGNFRCLQKMALFWCRVVVELKKLWSEEQHIPGVPLDEIPDLKLCLLYQQFQVLNCCISRKRRRYIAAESLDSLMEGSSITKESKDHRDSIPKAPFLYARLNTGELVLRLGADCPSGNVTLLETGEPVYSPVMQEGPLLTEDLIKETEEFVLRTGSVGAGCSQLLSDMQAFKAANPGCILEDFVRWHSPPDWSECELDTEAKDSSDGGDSGESLSTRGHLSQRMQKEGNLWRELWATSKPVPAVKQTPLFDEDLAVEGILHAFEDIQPSELFKQLFVSLLGLGVTIAEPLLSGSSDFSKLFSDCKEYIVVSCQSSSWSDRLDELCQVYQTVETMLTNPEEALMMIKQEDESAKTSGELRRRFKGLNFIFRGKEKPGRKPGSEDLVDPEDNSLRQSFSSFFDSKSSVFSKKSSKFQDISPGGKSPTPENNQAVVSAKLS 698
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco05g0890 698 PANTHER RAB3 GTPASE-ACTIVATING PROTEIN CATALYTIC SUBUNIT 89 673 IPR045700 GO:0005096|GO:0043547
Acco05g0890 698 MobiDBLite consensus disorder prediction 22 65 - -
Acco05g0890 698 MobiDBLite consensus disorder prediction 662 698 - -
Acco05g0890 698 Pfam Rab3 GTPase-activating protein catalytic subunit 369 524 IPR026147 -
Acco05g0890 698 MobiDBLite consensus disorder prediction 454 482 - -
Acco05g0890 698 MobiDBLite consensus disorder prediction 468 482 - -
Acco05g0890 698 MobiDBLite consensus disorder prediction 21 65 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco05g0890 Acco-ChrAcco05 17195090 17202410 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco10g0946 10 23303278 23309767 Acco05g0890 05 17195090 17202410 CCT
Acco05g0890 05 17195090 17202410 Acco05g0890 05 17195090 17202410 ECH