Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco05g0651 ATGGATCCAATCGGAGCATGGCAGGACCTTGGTTTTCGGGTCGGGTTCACGGGCCACAGTGGACACCTCCGAGTAGAGCCGCTGACGACGGTGGAGCGTTCTAATCCATTGAGTTCGCTTCCTGATTTCATCCTGCCACCTGCATTTCCGGAGGAGACACCTGAATCCATAAAGAAGTATATTGAAGAGACATATCTCACCCCAAGATTGGACCCTGATGACTTTTCACCCGAGAAAGTTGGGAGGCAGTGGGAATTTGACTGGTTTGACAGGGCTGAAGTGCCTCTGGAGCCATCTTTGCCTCGGACTGTTGTGGCTTTTGTTTGGGAACCACCATTTCGACGGCAAAACAATGTTTCCGAGCAAGGAAAATGGGAGCCAAAATCTGAGGAGGTGGATGTGTCAGAATTGATGCTAGGAGATGAAGACTCTGGGCCATTACCACGTGCTTCTGGATCTGCTAAGGACTTTGTAAGGGGAAGCAGCAATAATCGCCCCTTTCGTCCTGGAGGTTTGGATAACTCCCAAACTTTAAACAGAATTCTTCCAGAAGGTGCTTCTAATGGTGAATGGGTGCGTGAAATTTTGAATGGTGGCCCTCCTCAGACGATTCCTCCAGGGTTTAAACAAGGGTTGGACCTTGGAGCATTTAAGCCATATCCTTGCTCATGGAATGTTTACAAGGATGCCAGTTCACTTAAGAGGTCGTCAGATGAAAAACCGTGTGAGTTGTCTCTACAGTTTGACGACTTATTTAAGAAGGCTTGGGAAGATGGTGTTACTCATGAACAAGAGGAAGATGGCCATTTATCAGAAGTGGAGTCTGTTGCGCTGGAAGCTGAAGTTGATAAGGCGGAGGCATCTAGCAGTATGCATGAGGATGATTTTTCACTAGATGAAGTCTTGTCAACTAAATCAGAAGGATCAAAACCACTTTTAGATGCATCTGGTGATGGCGGACGGCAGCAAAAGGAGGCTTGGGCAGGTCGTGGAGGTAGCAAAGAAATCTTAGATCACTTTCATGAACTTGTTCCTGATATGGCACTTCAATTTCCCTTTGAATTGGATGCATTTCAGAAGGAGGCTATATATTATCTTGAGAAAGGGGAATCTGTTTTTGTTGCTGCTCACACATCAGCTGGAAAGACAGTAGTGGCAGAATATGCATTTGCTTTAGCATCAAAGCATTGCACTAGGGCTGTGTATACTGCTCCGATAAAAACTATCAGCAATCAGAAATATAGGGATTTCTGCGGGAAGTTTGATGTTGGGCTGCTTACTGGTGATGTAAGCTTGAGGCCAGAGGCTTCTTGTCTCATCATGACCACAGAAATTTTAAGGTCCATGCTCTATCGAGGTGCAGATATTATTCGGGATATTGAATGGGTTATATTTGACGAAGTGCATTATGTCAATGATGCTGAAAGAGGTGTTGTTTGGGAAGAAGTACCTAACACGGTTGAATTTGCTGATTGGATTGGTCGGACAAAACAAAAGGAGATCCGAGTTACAGGGACAACGAAAAGACCGGTTCCATTGGAGCACTGCCTGTATTATTCTGGAGAACTTTACAAAATATGTGAAAGTGAAACATTTCTGCCTCAGGGACTGAAAGCCGCTAAGGATGCATTTAAGAAAAAAAATTCAACTGCTGTTGGTGGTGGTTCTGGTCGATATTCGGGGACATCAGCAGGTCATGATGGTACTCAAGTTCAAAAACGTGAAAATGCAGCACGGCTTAAACATGGAAGTAGTTTCTCCAAAACTTCTAGAGGCTATCAGAATAATGGAAATGGCCAGAACAACTGGGAACTCAGGAGGGCAGAAGCTTCTATGTGGTTGAAGCTTATTAACAAGCTCTCCAAAATGTCACTTTTGCCTGTGGTCGTATTCTGTTTTTCTAAGAATCGCTGTGATAAATCAGCTGATAAAATGACTGGAACTGACCTAACTAGTAGCTCAGAGAAAAGTGAAATCCGTGTTTTCTGCGATAAATCATTTTCAAGGCTGAAAGGATCCGACAGGAATTTACCTCAGGTTGTTCGAGTCCAGAATCTTCTTTGTAGAGGGATTGGTGTGCATCATGCCGGCCTTCTTCCAATAGTGAAGGAAGTAGTTGAAATGCTATTCTGCCGTGGTGTTATCAAGGTTTTGTTTTCAACGGAGACATTTGCAATGGGTGTTAATGCTCCTGCCAGAACAGTAGTTTTTGATACTTTAAGGAAATTTGATGGCAAGGAATTTAGGCAGTTACTACCAGGAGAATATACTCAAATGGCTGGTCGTGCTGGAAGAAGAGGTCTTGATAAGATTGGTACTGTTGTTCTAATGTGTCATGATGAAATCCCTGAAGATAGGGATTTGAAGCATGTTATTGTTGGAAATGCAACCCGCCTTGAATCTCAATTTCGGCTTACCTATATTATGATCCTCCATCTCCTTCGAGCTGAAGAATTGAAGGTAGAAGATATGCTTAAAAGAAGTTTTGCTGAATTCCATGCTCAGAAAAAACTACCTGAAATGCAAGAACTTTTGAAGCGAAAGCTTAATCAACCTACAAAAGCTATTGAATGCATAAAGGGAGAGCCAACCATCGAGGAATACTATGAGACATACTCAGAAGCTGAGAAGTACGGTAGCAAAATATCTGATGCAATTATGCAGTCCCCTAATGCCCAACAATTTCTTGCTTCTGGAAGAGTAATAGTAGTGAAAACAGAATCAGCCAATGATCATCTGCTTGGTGTGATTGTGAAAGCTCCTTCTTCAAATTGTAAGCAATATATTGTTTTAGTGCTCAGGCCTGATTTGCCATCCCCCGGGGAAAATGCCCCAAGTAGGGGTAGTGTGCAAGATAAACCCAGTGACTTCAACCAGGGTTATTTTGTGGTGCCTAAATCAAAACGTGGTTTTGGAGATGATTATCATACCTCTGTTTCAACTCGTAGAGGAACAGGTGTTATCAACATCACACTACCACATCGTGGTTATGTTAGTGGAATGAGTTATGAAGTTCGAGGAGTTGATAGCAAGGAATTTCAATGCATTTGCAGTAGCAGAATGAAAATTGACCAAGTTGGACTTCTTGAAGATGTTAGCAATGCTATTTACTCCAAGACAGTTCAGATGCTCCTGGATTTAAAACCAGATGGAAACAAGTACCCTCCACCCCTGGATCCTGTGAAAGATCTAAAGTTGAAAGATGTTGAACTTGTGGACACATACCGCAAATGGACTAAATTATTGGAGAAGATGACCCGGAATCCGTGCCATGGGTGTATAAAATTGGAAGAGCACATGAAGCTAGCGGGAGACATACAAAAGCACAAACAAGAGGTCATTGATCTTCAATTTAGAATGTCAGACGAAGCACTTCAACAGATGCCAGACTTTCAGGGCCGGATTGATGTTCTGAAGGAAATTGGTTGCATAGATGATGATTTTGTTGTACAAATGAAAGGCCGTGTTGCCTGTGAGATGAACTCTGGTGAGGAATTGGTTTGCACTGAATGCTTGTTTGAGAATCAACTGGATGAACTGGAACCAGAAGAAGCCGTGGCATTAATGTCTGCCTTCGTGTTCCAGCAGAAAAACACTTCTGAACCTTCACTCACAACCAAGCTGTCTGAGGCAAAACATAAGTTGTACAATACTGCTATAAAACTTGGACAACTTCAAGTGCAGAAAGGACTACCAATAGATCCCGAAGAATATGCCCAAGAAAATCTCAAGTTTGGTCTTGTTGAAGTGGTTTATGAATGGGCAAAGGGTACTCCATTCGCGGACATCTGTGAGCTCACAGATGTTCCTGAAGGCTTGATAGTGAGGACCATTGTGAGACTAGATGAGACATGTCGAGAGTTTAAGAATGCTGCAGCGATTATGGGTAATTCTGCTCTCTGCAAGAAAATGGAAGTTGCTTCTAATGCAATTAAGCGTGACATTGTTTTTGCAGCTAGCCTGTACATTACTGGTGTATGA 3981 0.4288 MDPIGAWQDLGFRVGFTGHSGHLRVEPLTTVERSNPLSSLPDFILPPAFPEETPESIKKYIEETYLTPRLDPDDFSPEKVGRQWEFDWFDRAEVPLEPSLPRTVVAFVWEPPFRRQNNVSEQGKWEPKSEEVDVSELMLGDEDSGPLPRASGSAKDFVRGSSNNRPFRPGGLDNSQTLNRILPEGASNGEWVREILNGGPPQTIPPGFKQGLDLGAFKPYPCSWNVYKDASSLKRSSDEKPCELSLQFDDLFKKAWEDGVTHEQEEDGHLSEVESVALEAEVDKAEASSSMHEDDFSLDEVLSTKSEGSKPLLDASGDGGRQQKEAWAGRGGSKEILDHFHELVPDMALQFPFELDAFQKEAIYYLEKGESVFVAAHTSAGKTVVAEYAFALASKHCTRAVYTAPIKTISNQKYRDFCGKFDVGLLTGDVSLRPEASCLIMTTEILRSMLYRGADIIRDIEWVIFDEVHYVNDAERGVVWEEVPNTVEFADWIGRTKQKEIRVTGTTKRPVPLEHCLYYSGELYKICESETFLPQGLKAAKDAFKKKNSTAVGGGSGRYSGTSAGHDGTQVQKRENAARLKHGSSFSKTSRGYQNNGNGQNNWELRRAEASMWLKLINKLSKMSLLPVVVFCFSKNRCDKSADKMTGTDLTSSSEKSEIRVFCDKSFSRLKGSDRNLPQVVRVQNLLCRGIGVHHAGLLPIVKEVVEMLFCRGVIKVLFSTETFAMGVNAPARTVVFDTLRKFDGKEFRQLLPGEYTQMAGRAGRRGLDKIGTVVLMCHDEIPEDRDLKHVIVGNATRLESQFRLTYIMILHLLRAEELKVEDMLKRSFAEFHAQKKLPEMQELLKRKLNQPTKAIECIKGEPTIEEYYETYSEAEKYGSKISDAIMQSPNAQQFLASGRVIVVKTESANDHLLGVIVKAPSSNCKQYIVLVLRPDLPSPGENAPSRGSVQDKPSDFNQGYFVVPKSKRGFGDDYHTSVSTRRGTGVINITLPHRGYVSGMSYEVRGVDSKEFQCICSSRMKIDQVGLLEDVSNAIYSKTVQMLLDLKPDGNKYPPPLDPVKDLKLKDVELVDTYRKWTKLLEKMTRNPCHGCIKLEEHMKLAGDIQKHKQEVIDLQFRMSDEALQQMPDFQGRIDVLKEIGCIDDDFVVQMKGRVACEMNSGEELVCTECLFENQLDELEPEEAVALMSAFVFQQKNTSEPSLTTKLSEAKHKLYNTAIKLGQLQVQKGLPIDPEEYAQENLKFGLVEVVYEWAKGTPFADICELTDVPEGLIVRTIVRLDETCREFKNAAAIMGNSALCKKMEVASNAIKRDIVFAASLYITGV 1326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco05g0651 1326 CDD SF2_C_Ski2 606 779 - -
Acco05g0651 1326 Pfam DEAD/DEAH box helicase 358 495 IPR011545 GO:0003676|GO:0005524
Acco05g0651 1326 PIRSF SKI2 48 1323 IPR016438 GO:0003723|GO:0003724|GO:0006401
Acco05g0651 1326 FunFam DExH-box ATP-dependent RNA helicase DExH11 510 800 - -
Acco05g0651 1326 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 363 550 IPR014001 -
Acco05g0651 1326 MobiDBLite consensus disorder prediction 578 598 - -
Acco05g0651 1326 PANTHER ATP-DEPENDENT RNA AND DNA HELICASE 138 1307 - -
Acco05g0651 1326 Pfam rRNA-processing arch domain 822 1122 IPR025696 -
Acco05g0651 1326 MobiDBLite consensus disorder prediction 307 330 - -
Acco05g0651 1326 MobiDBLite consensus disorder prediction 139 176 - -
Acco05g0651 1326 Gene3D - 1105 1323 - -
Acco05g0651 1326 Gene3D - 801 866 - -
Acco05g0651 1326 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 506 781 IPR027417 -
Acco05g0651 1326 Pfam DSHCT (NUC185) domain 1149 1318 IPR012961 -
Acco05g0651 1326 SMART DSHCT_2 1145 1323 IPR012961 -
Acco05g0651 1326 MobiDBLite consensus disorder prediction 582 598 - -
Acco05g0651 1326 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 615 814 IPR001650 -
Acco05g0651 1326 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 338 487 IPR027417 -
Acco05g0651 1326 Gene3D - 319 509 IPR027417 -
Acco05g0651 1326 Gene3D - 510 800 IPR027417 -
Acco05g0651 1326 FunFam Ski2 ATP-dependent RNA helicase 1098 1323 - -
Acco05g0651 1326 Pfam Ski2 N-terminal region 79 218 IPR040801 -
Acco05g0651 1326 FunFam DExH-box ATP-dependent RNA helicase DExH11 801 868 - -
Acco05g0651 1326 SMART helicmild6 681 767 IPR001650 -
Acco05g0651 1326 SMART ultradead3 351 514 IPR014001 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco05g0651 Acco-ChrAcco05 9444767 9465108 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco05g0651 05 9444767 9465108 Acco05g0651 05 9444767 9465108 ECH