Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco04g2893 ATGGCGAAGCCTCGCAAACCGAAGAGCGAAGATCCCAAGCCCGAGAATTCTGGTGCTGTAGTTCACCACCAAAAGCTCTGCCTCTCAATCGACATGGACAAGCGTCTTGTCTACGGGTACACTGAATTGGAAATTGCCGTGCCCGAGATTGGGATTGTTGGCCTGCACGCAGAGAATATATGCATCGAAAATGTCTTCGTTGATGGTGAGCCAGCAGAGTTTGAGTATTATCCGCATCACCAGCAACAAGTGGAGAATGAAAAGAGATGGAGCTCGGCATTTTCTCCTAGCTCGGCTGCAGATGTTGCAGGGTCGATTTATTTATCTGCGTTAGAAAAGGAATTGGTTCCAAATTTACTAATTAACTGTTGTAAACCTTTTAAGAGTGACTATGAACAGCAGGAGCAGCCCGTTTCTGAAAACGGGTTTCATTCTTCCGGAGATGACAAGCAGAATTTAAGGTTTGTACGCATTGATTATGGGATAGCCAAGGCAGAAACAGGGATCCACTTCAAAGATAGTGTTCTTCTTACTGATAACCAGATAAGGAGAGCAAGATGTTGGTTTCCTTGTATCGATGACAATTCTCAGCGATGTTGTTATGATCTTGAGTTCACAGTTGCACATGATCTTGTGGCTGTCAGTGCCGGAACCTTGCTATATCAGGTTATGAGCAAGGATAGCCCTCCTCGGAAGACATATGTCTATAAATTGGATGTTCCCGTTGCTGCTAGGTGGATATCTTTGGTTGTAGCCCCATTTCAAATTCTTCCGGATTACCAATTTGGTCAAGTATCTCATATATGTTTGTTACCTAATCTATCAAAGCTTCGGTATACTGTGGAATTTTTCCATAGCGTATTCAGTTGCTATAAGGATTACCTTTCTGTTGACTTCCCATTTGACTCATACAAGCAAGTTTTCATAGAGCCAGAGACGGCAGTTTCATCATTAAGTTTAGGAGCTTCTATTAGTATGTTTAGTTCCCAAGTTTTGCTCGATGAGAAGGTTATCGATCAGACTATCAATACAAGGATAAAAATTGCATATGCCCTTTCAAGGCAGTGGTTTGGTGTGTATATAACCCCTGAGGCAGCAACTGATGAGTGGCTCTTGGAAGGGCTTGCTGGTTTCTTGACAGACTTTTATGTGAAGAAACACCTAGGAAATAATGAGGCACGGTACCAGAGATACAAGGCAAATTGTGTTGTTTGTAAGGCAGATAACAGTGGGGTGACAGCATTGAGCTGTTCAGCATCATGCAAGGATTTATATGGAACCCAATGCGTTGGTTTTTATGGAAAAATAAGATCATGGAAGTCTGTGGCTATTCTTCAGATGTTGGAAAAGCAGATGGGTCCTGAATCTTTTCGTAAAATTTTGCAAACAATAGTTTCCCGGGCTCAAGATAAAACCCGTTCTGTGAAAACGCTTAGTACTAAGGAGTTTCGACATTTTGCCAATAAGGTGGGAAATCTGGAACGTCCTTTTCTCAAAGAGTTCTTCCCTCGATGGGTTGGTTCTTGTGGATGCCCTGTTCTAAGGTTTGGGCTTTCCTACAACAAAAGGAAGAATATGGTTGAATTGGCAGTGTTGCGGGATTGCACAGCTTCACAAGATTCAAAGGCATCAATTCTTGATATTAGTCCAGAAACTGAAAATCAAGATGGAGATGTTGGATGGCCTGGGATGATGAGTATTAGGGTCTTTGAACTTGATGGCATGTATGACCATCCAATTCTACCTATGGCTGGAGAAGCATGGCAACTACTGGAAATTCAATGCCACTCAAAGCTTGCCGCTAGGCGATTCCAGAAGCCTAAGAAAGGTTCAAAACCTGATGGATCAGATGATAATGGTGACGCACCTGCCATGGATGTGCGCTTCAGTTCTGAGTCCCCTTTATTATGGATTAGAGCAGATCCTGAAATGGAGTACCTCGCTGAGATTCATTTTAGTCAGCCTGTTCAGATGTGGATTAATCAATTGGAGAAGGATAAAGATGTTATTGCTCAAGCTCAAGCGATTGCCACCCTAGAGGCATTACCCCAGATATCATTTGCTGTTGTAAATGCCTTGAACAATTTTCTTACTGACTCTAAGGCTTTTTGGAGGGTTCGGATCGAAGCTGCATTTGCATTGGCTAGTACAGCATCTGAGGAAACTGATTGGGCTGGTCTGCTCCATTTAGTGAAATTTTTCAAGAGTCGTAGGTTTGATCCTGATATTGGACTACCAAAGCCAAATGACTTTAATGATTTTGCCGAGTATTTTGTTCTTGAGGCTATCCCACATGCCGTAGCTATGGTCAGAGCTGCTGATAGGAAAAGCCCGAGAGAGGCTGTGGACTTTGTTTTACAGCTGTTGAAGTACAATGACAACGATGGGAATCCCTACTCAGATGTCTTCTGGCTTGCTCAATTGGTCCAGTCAATTGGTGAACTTGAGTTCGGGCAGCAGAGTATTCTCCTTTTATCATCACTCCTGAAGCGCATTGACCGGCTCATACAATTTGACAGACTCATGCCGAGCTACAATGGAGTCTTGACTATTAGTTGTATCAGAACCTTGACACAAATTGCGTTAAAGCTTTCCGGATTCATTCCCCTTGATCGTGTCTATGGACTTGTAAAACCTTTTCGAGACTTAAAAGTAATGTGGCAAGTTCGTATTGAAGCAAGCAGAGCACTCCTTGATCTTGAATTCCACTCCAAGGGAATTGATGCGGTGTTACTGTTATTTATCAAATATGTGGAAGAGGAGCTTTCCCTAAGAGGGCAGGTAAAACTGGCTATCCATGTTATGCGCTTATGTCAGATGAGAAATGATTCCAGTGACGCAGTTTCAAACCGAACATTTGTGGCTCTGCTTTGTTTGCTTGAAGGTCGTTTGTCATTCAATAACGTCTTTCTCCGTCACCATTTGTTCTGCATATTACAAATACTTGCGGGAAGATCACCAACTCTACATGGAGTGCCCAGAGAAAATAAATCGTTGCAAATGAGTCTTGTGGAAAATTGCAGCGATCAGAGAAACATACTTGTCCTTGATCCAGAAAGTAAACCTCCTGAATTGCCTTGCTCTACCCAAAACCTGACAGAAGATTGCGGCATGGTAGAGGGTTTCAAGGACACAGTTCAAGAAGCACCTGGGAATGCAACCCCCGATCCTCTCGAAGATATGCTTGTCAAAACTCCAAAGGAATCACCCATTGAGGCTCCCAAAGAAGAAATGATGCAGGACTCGCCAACAGAAGTTCCCAAGGAAGTTGATGCCACATCCATTGCCCAAGAGCGGAAGAAGCCAGTTGTTAAAATCAGAGTCAAACAATCCTCTGCTGCCAGTAGGGCTGACACTGATAATCAAATGGTTGAACGATCATTAGGTGGCCATAATGAAATCGATCGTGCAGCTAGCAGTTCAATGTCTGTAGATGCACCCCCAAGGAATTTTGGAGAGACTCTGAGTAATCACAATATTGAGGAAGTCAATTCTTGGCATGATCATGGTTCACGCTTGACTGCCAGCATTGGTAGTGCCAAATTCTTGAGTGATGGTGATGAACTGGTCAAAGAACTCCAATGTACTGCTGACTCAAGTGTTGTTTTTTCACCTCGGCCTTTGGATCCCTCATCATCTAGCATCATCCAGGACAACAATATTGATGCTGATGCTCGGCGATTTGTCAGCCTCCGAACTCTTTCAGTTGCAGACTCATTAGCCGGAAATGTTTCTTTGCATGGGAAAGGAAAGAAGAAAGGCAAGGAAAAAAGACGGAAGCAAGAAGACCATAAAGGGCACCGTGATGATCCAGAATATTTGGAAAGAAAACGATTGAAGAAGGAGAAAAAGCGGAAGGAAAAAGAGATGGCAAAACTTCAGGGTGATGAAGAAAAGAAATCTTTGGTAGAATCTTCTAGTAAGAAAGAACCACCTGAGAGTGAATTTGCTACAAAAGAACTGAAAGCAATTGAACCTAGGGTATCTAAAGCAGAAGTCAGAAAGGTTGATGTCAAGCCGGAAGCATCGGAAGGTACTTCTGCTGCCCCAAAATTTCGAATCAAAATTAAAAATCGAGGCCTCAATAAGTCATAG 4095 0.4295 MAKPRKPKSEDPKPENSGAVVHHQKLCLSIDMDKRLVYGYTELEIAVPEIGIVGLHAENICIENVFVDGEPAEFEYYPHHQQQVENEKRWSSAFSPSSAADVAGSIYLSALEKELVPNLLINCCKPFKSDYEQQEQPVSENGFHSSGDDKQNLRFVRIDYGIAKAETGIHFKDSVLLTDNQIRRARCWFPCIDDNSQRCCYDLEFTVAHDLVAVSAGTLLYQVMSKDSPPRKTYVYKLDVPVAARWISLVVAPFQILPDYQFGQVSHICLLPNLSKLRYTVEFFHSVFSCYKDYLSVDFPFDSYKQVFIEPETAVSSLSLGASISMFSSQVLLDEKVIDQTINTRIKIAYALSRQWFGVYITPEAATDEWLLEGLAGFLTDFYVKKHLGNNEARYQRYKANCVVCKADNSGVTALSCSASCKDLYGTQCVGFYGKIRSWKSVAILQMLEKQMGPESFRKILQTIVSRAQDKTRSVKTLSTKEFRHFANKVGNLERPFLKEFFPRWVGSCGCPVLRFGLSYNKRKNMVELAVLRDCTASQDSKASILDISPETENQDGDVGWPGMMSIRVFELDGMYDHPILPMAGEAWQLLEIQCHSKLAARRFQKPKKGSKPDGSDDNGDAPAMDVRFSSESPLLWIRADPEMEYLAEIHFSQPVQMWINQLEKDKDVIAQAQAIATLEALPQISFAVVNALNNFLTDSKAFWRVRIEAAFALASTASEETDWAGLLHLVKFFKSRRFDPDIGLPKPNDFNDFAEYFVLEAIPHAVAMVRAADRKSPREAVDFVLQLLKYNDNDGNPYSDVFWLAQLVQSIGELEFGQQSILLLSSLLKRIDRLIQFDRLMPSYNGVLTISCIRTLTQIALKLSGFIPLDRVYGLVKPFRDLKVMWQVRIEASRALLDLEFHSKGIDAVLLLFIKYVEEELSLRGQVKLAIHVMRLCQMRNDSSDAVSNRTFVALLCLLEGRLSFNNVFLRHHLFCILQILAGRSPTLHGVPRENKSLQMSLVENCSDQRNILVLDPESKPPELPCSTQNLTEDCGMVEGFKDTVQEAPGNATPDPLEDMLVKTPKESPIEAPKEEMMQDSPTEVPKEVDATSIAQERKKPVVKIRVKQSSAASRADTDNQMVERSLGGHNEIDRAASSSMSVDAPPRNFGETLSNHNIEEVNSWHDHGSRLTASIGSAKFLSDGDELVKELQCTADSSVVFSPRPLDPSSSSIIQDNNIDADARRFVSLRTLSVADSLAGNVSLHGKGKKKGKEKRRKQEDHKGHRDDPEYLERKRLKKEKKRKEKEMAKLQGDEEKKSLVESSSKKEPPESEFATKELKAIEPRVSKAEVRKVDVKPEASEGTSAAPKFRIKIKNRGLNKS 1364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco04g2893 1364 Gene3D tricorn interacting facor f3 domain 20 251 IPR042097 -
Acco04g2893 1364 MobiDBLite consensus disorder prediction 603 624 - -
Acco04g2893 1364 MobiDBLite consensus disorder prediction 607 621 - -
Acco04g2893 1364 SUPERFAMILY ARM repeat 442 982 IPR016024 -
Acco04g2893 1364 MobiDBLite consensus disorder prediction 1244 1364 - -
Acco04g2893 1364 FunFam Transcription initiation factor TFIID subunit 259 510 - -
Acco04g2893 1364 MobiDBLite consensus disorder prediction 1286 1341 - -
Acco04g2893 1364 CDD M1_like_TAF2 23 506 - -
Acco04g2893 1364 Coils Coil 1274 1299 - -
Acco04g2893 1364 Gene3D Neutral Protease Domain 2 263 510 IPR027268 -
Acco04g2893 1364 SUPERFAMILY Leukotriene A4 hydrolase N-terminal domain 17 252 IPR042097 -
Acco04g2893 1364 MobiDBLite consensus disorder prediction 1262 1278 - -
Acco04g2893 1364 SUPERFAMILY Metalloproteases ("zincins"), catalytic domain 272 515 - -
Acco04g2893 1364 MobiDBLite consensus disorder prediction 1134 1151 - -
Acco04g2893 1364 Gene3D - 652 961 IPR011989 -
Acco04g2893 1364 Pfam Peptidase family M1 domain 279 479 IPR014782 GO:0008237|GO:0008270
Acco04g2893 1364 MobiDBLite consensus disorder prediction 1130 1151 - -
Acco04g2893 1364 PANTHER TRANSCRIPTION INITIATION FACTOR TFIID 1 1286 IPR037813 GO:0005669
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco04g2893 04 45512550 45547061 Acco04g2893 04 45512550 45547061 ECH