Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco04g2810 ATGGCCCAATACCAGAGACGCACAAGCGTCATCGACTTTCTTGGTGAAGAAATCGTGAGAATCATCGCACCAGTATCAATCTGTATGGTTTTGGTCGTCTTCTTGGTTTCAATCCTTAATACCAGTACCAACTCTTCTTCTTCAGCATCAATCTCCAGTGTAGCCACCGTTGCATACAACGAGACCAGCTCAGACTCTTTCTGGGACAAATTCGTAGGTGCCCTTTTGAACTCTTTGGCATTTGTAGCCGTTGTCACTGTTGCAACTTTTGTTTTGGTCCTTCTCTTCTATCTTAGATGCACCAGATTCTTAAAACTATATATGGGGTTCTCTTCTTTTGTTGTTTTGGGATTCTTGGGTGGTGAAATTTCCCTACTCTTTATTGAAGATTTTAGAATCCCTGTTGATTGCATAACATTTTTCCTGGCCTTGTTTAATTTTGCTGTTGTTGGTGTATTGGCCGTCTTTATGTCCAAAATGGCAATTGCTGTGACTCAAGGTTACTTGATTCTTATTGGAATGCTGGTTGCTTATTGGTTCACCATGTTACCTGAATGGACCACCTGGGTGCTTCTGGTTGCCATGGCATTGTATGATCTTGCTGCTGTTTTATTACCAGTTGGACCATTAAGACTTTTGGTAGAACTTGCAATCTCAAGAGATGAAGAAATTCCTGCACTGGTTTATGAGGCTAGACCAGTGAACTCTGACCAGGTGGATCCGAGGGTTGATGTAACTCAGAGAAGGAGGGTTTGGAGAGATAGGAGGGTTGAGAACTCAATTCTACCAAGTGATTCAAATCCAAGTGTTAATTCTGTGCTTGGTGAAACCCCAAATAGTGAATCAAACTCCAATATTGATATAATGAATGCTGTTAAAAGAGATTTGGTCAGTAATACTTCAGATGGAACCCATGAAGACTCAAATTTGGATAGGGAAAATGCTGATTTAAACTCAAATCCTTCTACCAGTGACAGAAATTTGGTGAGAGCTGAAGAGGGACGGGTTTTAGAGACCAACTCTGAGCTTTCTGAACCCTTGATTGGTCATGAAATGAATGTGCAGATTCACAGAGAAGAAGATGCAGGGGCAGGTCAAAGCTTGATGCCAGAGGGGATTGGATTGGGGTCATCTGGAGGAATTAAGCTAGGGTTAGGAGATTTCATTTTTTACAGTGTTTTGGTTGGCAGGGCAGTGATGTATGATTATATGGCAGTGTATGCTTGTTATCTAGCTATCATTGGTGGTCTGGGCATCACTTTGATGCTATTAGCATTATATCAGAAAGCCTTACCGGCTCTTCCAGTGTCAATCATGCTAGGAGTATCCTTTTACTTCTTTTCCAGGTTCTTGCTTGAACCATTTGTTTTGCAATGTTCCTTGAACCTCCTTATGTTCTAA 1401 0.414 MAQYQRRTSVIDFLGEEIVRIIAPVSICMVLVVFLVSILNTSTNSSSSASISSVATVAYNETSSDSFWDKFVGALLNSLAFVAVVTVATFVLVLLFYLRCTRFLKLYMGFSSFVVLGFLGGEISLLFIEDFRIPVDCITFFLALFNFAVVGVLAVFMSKMAIAVTQGYLILIGMLVAYWFTMLPEWTTWVLLVAMALYDLAAVLLPVGPLRLLVELAISRDEEIPALVYEARPVNSDQVDPRVDVTQRRRVWRDRRVENSILPSDSNPSVNSVLGETPNSESNSNIDIMNAVKRDLVSNTSDGTHEDSNLDRENADLNSNPSTSDRNLVRAEEGRVLETNSELSEPLIGHEMNVQIHREEDAGAGQSLMPEGIGLGSSGGIKLGLGDFIFYSVLVGRAVMYDYMAVYACYLAIIGGLGITLMLLALYQKALPALPVSIMLGVSFYFFSRFLLEPFVLQCSLNLLMF 466
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco04g2810 466 MobiDBLite consensus disorder prediction 299 313 - -
Acco04g2810 466 Pfam Presenilin 14 456 IPR001108 GO:0004190|GO:0016020|GO:0016485
Acco04g2810 466 MobiDBLite consensus disorder prediction 298 332 - -
Acco04g2810 466 Gene3D Presenilin 373 458 IPR042524 -
Acco04g2810 466 PANTHER PRESENILIN 7 466 IPR001108 GO:0004190|GO:0016020|GO:0016485
Acco04g2810 466 MobiDBLite consensus disorder prediction 262 286 - -
Acco04g2810 466 SMART psh_8 72 452 IPR006639 GO:0004190|GO:0016020
Acco04g2810 466 FunFam Presenilin 355 457 - -
Acco04g2810 466 PRINTS Presenilin family signature 22 32 IPR001108 GO:0004190|GO:0016020|GO:0016485
Acco04g2810 466 PRINTS Presenilin family signature 199 216 IPR001108 GO:0004190|GO:0016020|GO:0016485
Acco04g2810 466 PRINTS Presenilin family signature 182 189 IPR001108 GO:0004190|GO:0016020|GO:0016485
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco04g2810 Acco-ChrAcco04 44785966 44787366 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco04g2810 1 466 Miscellaneous Gene Families AT2G29900 58.155 4.01e-157 449
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco04g2810 04 44785966 44787366 Acco04g2810 04 44785966 44787366 ECH