Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco04g2783 ATGTTTGGTTCGAGGAAATCTCCCCTAAAATTAGTTAAACATAGTTCTGTTGAGTCTGTTTATCCTGTTAAATCAGGATCAAATCCATTTGATTCTGATGATGATGAGCCAATGGAAAACCAAAAAGTTAATTCCTCAAATAGGACATCTTCAGACCCTTCCCTAGTTTTGCAAGGAGGAAAAACTAACCCCTTTGATGATGATGATGATGATGATGATGATGGAGGCGATACGAATTCTTGTTCATCTTCTAGTGCCCTTCAATCAAAGGAAAACCAAAAAGTTAATTCCTCGAATAGGACATCTTCAGACCCTTCCCTAGTTTTGCTAGGAGGAAAAACTAATCCCTTTGATGATGATGGAGGCGACAGGAATTCTTTTTCATCTTCTTATGCCCTTCGATCAGCAAACCAAAACAAGTATAGGAATGCTTTTCGTGACTCAGGAGGAATAGAGAGTCAATCAGTGCAGGAGTTGGAGAATTATGCTGTTTACAAGGCTGAAGAGACTACCAAATCAATCAAAAACTGTTTGAAGATAGCGGAGGACATGAGAGAGGATGCTACCAAGACTTTAGTCACTCTACGCCAACAGGGTGAGCAAATTACCAGGTCTCACAATGTTGCAGTTGACATCGACCAACATCTTAGTCGGGGAGAAAAGCTTTTAGGAAGACTTGGTGGCATCTTCTCTAAAACCTGGAAACCAAAGAAGACACGACCAATTACAGGGCCTGTTATTGTTGGAGATGACCAGGTCCAAAGAAAGGGCAGCCAGTTGGAGCAGAGACACAAATTGGGATTGACTTCTGCACCCAGAGGGAAGTCAAACTTTCGAACACCATCTCCTGAGCCAACCAATGCTCTTGAAAAAGCTGAGATTGAAAAGGGGAAACAAGATGATGCATTGTCAGATTTAAGCAATCTCTTGGGAGAGCTGAAAGATATGGCTATTGACATGGGATCTGAAATTGAGAGACACAACAAAGCGCTGGGCCATATGGAAAACGATGTGGACGAGTTGAATTACCGCGTAAAAGGGGCTAATCAACGTGGTCGTCGTTTACTGGGAAAATAA 1077 0.4197 MFGSRKSPLKLVKHSSVESVYPVKSGSNPFDSDDDEPMENQKVNSSNRTSSDPSLVLQGGKTNPFDDDDDDDDDGGDTNSCSSSSALQSKENQKVNSSNRTSSDPSLVLLGGKTNPFDDDGGDRNSFSSSYALRSANQNKYRNAFRDSGGIESQSVQELENYAVYKAEETTKSIKNCLKIAEDMREDATKTLVTLRQQGEQITRSHNVAVDIDQHLSRGEKLLGRLGGIFSKTWKPKKTRPITGPVIVGDDQVQRKGSQLEQRHKLGLTSAPRGKSNFRTPSPEPTNALEKAEIEKGKQDDALSDLSNLLGELKDMAIDMGSEIERHNKALGHMENDVDELNYRVKGANQRGRRLLGK 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco04g2783 358 Gene3D - 150 227 - -
Acco04g2783 358 Coils Coil 178 198 - -
Acco04g2783 358 CDD SNARE_SNAP25N_23N_29N_SEC9N 161 224 IPR044766 GO:0005484|GO:0031201
Acco04g2783 358 MobiDBLite consensus disorder prediction 253 286 - -
Acco04g2783 358 MobiDBLite consensus disorder prediction 78 109 - -
Acco04g2783 358 MobiDBLite consensus disorder prediction 42 58 - -
Acco04g2783 358 SMART tSNARE_6 288 355 IPR000727 -
Acco04g2783 358 SMART tSNARE_6 159 226 IPR000727 -
Acco04g2783 358 Coils Coil 324 344 - -
Acco04g2783 358 FunFam SNAP25 homologous protein SNAP33 150 227 - -
Acco04g2783 358 FunFam SNAP25 homologous protein SNAP33 290 357 - -
Acco04g2783 358 SUPERFAMILY SNARE fusion complex 296 356 - -
Acco04g2783 358 CDD SNARE_Qc 298 354 - -
Acco04g2783 358 PANTHER SYNAPTOSOMAL ASSOCIATED PROTEIN 46 358 - -
Acco04g2783 358 SUPERFAMILY SNARE fusion complex 154 224 - -
Acco04g2783 358 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 293 355 IPR000727 -
Acco04g2783 358 MobiDBLite consensus disorder prediction 1 124 - -
Acco04g2783 358 Gene3D - 291 357 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco04g2783 Acco-ChrAcco04 44602257 44604795 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco04g2783 04 44602257 44604795 Acco04g2783 04 44602257 44604795 ECH