Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco04g2631 ATGACTATGATTCGTCGCAATTGGGCTGTACTGTGCCTTCTGGTTTTTTCAACCGTCCTCTTTGACCTGTCCGTCTCTGAACCTCAATCCCATTGGGCTGCCAAGAAAAAACGCATGAGAGAGAAAGCTCGCGAGATGTTTTACCATGCGTATGACAACTACATGACTCATGCATTCCCGCATGATGAGCTAAAGCCTCTAACCAAAACATTCACAAACTCCCTTAGTGAGCTGGGAAATTTGAATCTTGAACACTTGCCTCAAGACTACAATGGATCAGCTCTTACACTTATTGAATCATTGTCTAGCCTTGTTATTATGGGCGACAGCACTGAATTCAAGAGGGCAGTGCTCTGGCTTTCTGAAAATCTAACATTTGATGTTGATGCGCGAATAAATCTTTTTGAGTGCAACATTAGAATCCTTGGAGGACTTATCTCTGCTCATCTTCTTGCATCTGATTCTGCAAATAATTTGTTTCAAGGAGCCTACAATAATGAGTTGCTAGTACTGGCTGAAGATTTAGGGAACCGCTTTCTACCAGCATTTAATACACCCACGGGATTGCCATATGCTTGGATCAACTTAAAGTATGGAGTAATGGAGAATGAGACTACAGAAACAAGCACTTCGGGTTGTGGTTCTTTAATTCTTGAAATGGGTGCTTTATCAAAATTGACCGGTGATCCTATATATGAATCAGTGGCTTTGCGAGCTCTACACAAGCTATGGAGCATGCGAAGTTCACTAAATTTATTTGGAACTACTCTAGATGTGGAAACTGGGGGATGGATAGAGTTTTCATCAGGAATTGGAGCAGGGGTTGATTCATTCTACGAGTATCTTCTTAAAGCCCATATCCTTTTTGGGAAGGAAGACTTCTGGAGAATGTTTCGACTTGCTTATGTTGCCGTGCAGAAATATTTCAGACATGGTCCTTGGTACCATGAAGCTGATATGAGGACAGGAAGAGCAACTTATTGGCAACTTACAAGCCTTCAAGCATTTTGGCCTGGCCTACAGGTTCTTATTGGGGATATTACAGCTGCTAATTCAACGCATCGTGAATTCTACCATGTGTGGGAGAAATTTGGAGTGCTTCCAGAGAGGTATTTGCTGGACCATCAGATGCTGCATCCTACTGAAAAATATTATCCATTGCGACCTGAATTTGCAGAGTCAACATTCTATTTATATCAAGCAACTAAAGATCCATGGTATATTGAAGTGGGTGAATCAATAGTCAATTCCCTGAACACATACACCAAAGTTGAAGGTGGGTTTGCAAGCATCAGGGATGTGAAAACAATGGAGCTGGAAGATCATCAGCATAGTTTTTTCCTTGCTGAAACGTGCAAATATTTGTATCTTCTATTTGATGATTCATTTGTAAAAGAAGGTAATTACATATTTACCACTGAAGGCCATCCTCTTCCAGTACTAAGTGTTTGGCAAGAAAGGCTCCCAGAAACTTACATTCCCACTAACTGGACATACATGAAGAGTGAAAAAGCATATAAAATAAGTGCAATGTCAATGCAAGTATGTCCTGCAGTGACTCTAAGTTCGGGGAAACATATCGAGAGTGGATGCCACGTGCCTGATGCTCGCAGTGACCACAGGTGTTTTGCTGATGAAGATTGTGGAGTTGACTCCACAACATGTAGAAGTAGGTCTTGTAGTATGGCTGGTTATTGTGGGTTGTGGTTCTCTATATGA 1719 0.4142 MTMIRRNWAVLCLLVFSTVLFDLSVSEPQSHWAAKKKRMREKAREMFYHAYDNYMTHAFPHDELKPLTKTFTNSLSELGNLNLEHLPQDYNGSALTLIESLSSLVIMGDSTEFKRAVLWLSENLTFDVDARINLFECNIRILGGLISAHLLASDSANNLFQGAYNNELLVLAEDLGNRFLPAFNTPTGLPYAWINLKYGVMENETTETSTSGCGSLILEMGALSKLTGDPIYESVALRALHKLWSMRSSLNLFGTTLDVETGGWIEFSSGIGAGVDSFYEYLLKAHILFGKEDFWRMFRLAYVAVQKYFRHGPWYHEADMRTGRATYWQLTSLQAFWPGLQVLIGDITAANSTHREFYHVWEKFGVLPERYLLDHQMLHPTEKYYPLRPEFAESTFYLYQATKDPWYIEVGESIVNSLNTYTKVEGGFASIRDVKTMELEDHQHSFFLAETCKYLYLLFDDSFVKEGNYIFTTEGHPLPVLSVWQERLPETYIPTNWTYMKSEKAYKISAMSMQVCPAVTLSSGKHIESGCHVPDARSDHRCFADEDCGVDSTTCRSRSCSMAGYCGLWFSI 572
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco04g2631 572 Gene3D - 29 490 IPR012341 GO:0005975
Acco04g2631 572 Pfam Glycosyl hydrolase family 47 46 479 IPR001382 GO:0004571|GO:0005509|GO:0016020
Acco04g2631 572 SUPERFAMILY Seven-hairpin glycosidases 37 493 IPR036026 GO:0004571|GO:0005509|GO:0016020
Acco04g2631 572 PANTHER ER DEGRADATION-ENHANCING ALPHA-MANNOSIDASE-LIKE PROTEIN 2 10 504 IPR044674 GO:0004571|GO:1904380|GO:1904382
Acco04g2631 572 PRINTS Glycosyl hydrolase family 47 signature 272 289 IPR001382 GO:0004571|GO:0005509|GO:0016020
Acco04g2631 572 PRINTS Glycosyl hydrolase family 47 signature 181 200 IPR001382 GO:0004571|GO:0005509|GO:0016020
Acco04g2631 572 PRINTS Glycosyl hydrolase family 47 signature 445 465 IPR001382 GO:0004571|GO:0005509|GO:0016020
Acco04g2631 572 PRINTS Glycosyl hydrolase family 47 signature 131 149 IPR001382 GO:0004571|GO:0005509|GO:0016020
Acco04g2631 572 PRINTS Glycosyl hydrolase family 47 signature 46 66 IPR001382 GO:0004571|GO:0005509|GO:0016020
Acco04g2631 572 PRINTS Glycosyl hydrolase family 47 signature 329 345 IPR001382 GO:0004571|GO:0005509|GO:0016020
Acco04g2631 572 PRINTS Glycosyl hydrolase family 47 signature 386 410 IPR001382 GO:0004571|GO:0005509|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco04g2631 Acco-ChrAcco04 43161953 43166901 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco04g2631 11 569 Glycoside Hydrolase AT1G27520 75.532 0.0 894
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco04g2631 04 43161953 43166901 Acco04g2631 04 43161953 43166901 ECH