Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco04g2556 ATGTCATCGACGCCGGCGAGAGATAGCGGGATCTTTAGCCGGATGGCGAGCCTTCCTCGGAGCATTATGGGGGAGATTTCAAGGGCCATGAATGACATAGGATCAGGAAGAAGAAGAAGACGACGATCAAGACATGAAAACGAATTACTCTCTTCTTCACCTTCAGATTTCCAGTTCCAGCCATTTCAGCCGTTGGATCCAGCAGCGGAGGTTCGGGAGGATCAGTGGGCTTTTCTGGAGAGTTTTGAGCTTCAATACGGCACCGTTCATCCTTTCTTCTACGCCTGCCGTTTAATGGAAGTTCTGAAACTTGCAGAGAATGACAAGAAGTTGGTGTTCATGTACATCCATTCACCAGAACACCCTTTCACGCACAATTTCTGTAGAGACACGCTGTGTAGTGAGCTTGTGACTGAGTTTCTTGACGTCAACTTTATTTGCTGGGGAGGTTTCTCCGATCGCGGCGAAGGTATGCGTATGGTGGCCACTCTCCGCCCTGCTAGCTTCCCCCTCTGCGCCGTCGTCTCCCCTGCCGCCGGCGATTCCATGGCGGTTCTGCAACAGATAGAAGGGCCGGTTTCAGCGGCGGAGCTAGTGGAGGTTTTACAGAGAACAATGGAGGAGCAAGGATTGGCTTTTGGAAGTGACAGAGCTCGGCGGGAAGAAATGGTCAGAGCTGATCGTCGGATAAGAGAAGAACAAGATGCTGCATATCTTGCAGCTTTGAGAATTGACAAGGAAAAAGAAAAACTCAGGAATTCAACTTCATCAACAGAAAGAATTCAGAAACCAGCAGAACCATTGAACTCCAGAAATTATGAGAAGCCTAAGAATAACAATTCTGTGAGCAAACGCAGCTCTAAAGTGAATCAACATACTATCGCTGCGCAAAATCAAAATAAAGGAGTTCCAGGCCTGTCTCAACCCACTCAGATATTGATAAGGTTTCCAAATGGGCAAAGAAGGGAGCAGAGATTTGATTGCAGTGATAAAATCCAAGCAATTTTTGCATTCATTGATTCATTGGGTATGCCTGGGATTGGCAACTACAGATTGGTGTCAAACTTCCCAAAAAGAGTGTATGGTGTTGATCAGATGAGAATGACTCTCAAAGATGCGGGCTTGCATCCCAAAGCTAGCCTTTTCCTCGAGCCCTTACCCGCTGACCCGTAG 1173 0.4749 MSSTPARDSGIFSRMASLPRSIMGEISRAMNDIGSGRRRRRRSRHENELLSSSPSDFQFQPFQPLDPAAEVREDQWAFLESFELQYGTVHPFFYACRLMEVLKLAENDKKLVFMYIHSPEHPFTHNFCRDTLCSELVTEFLDVNFICWGGFSDRGEGMRMVATLRPASFPLCAVVSPAAGDSMAVLQQIEGPVSAAELVEVLQRTMEEQGLAFGSDRARREEMVRADRRIREEQDAAYLAALRIDKEKEKLRNSTSSTERIQKPAEPLNSRNYEKPKNNNSVSKRSSKVNQHTIAAQNQNKGVPGLSQPTQILIRFPNGQRREQRFDCSDKIQAIFAFIDSLGMPGIGNYRLVSNFPKRVYGVDQMRMTLKDAGLHPKASLFLEPLPADP 390
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco04g2556 390 ProSiteProfiles UBX domain profile. 310 383 IPR001012 GO:0005515
Acco04g2556 390 CDD UBX 312 384 - -
Acco04g2556 390 MobiDBLite consensus disorder prediction 272 290 - -
Acco04g2556 390 Gene3D Glutaredoxin 65 211 - -
Acco04g2556 390 PANTHER FAS-ASSOCIATED PROTEIN 5 384 - -
Acco04g2556 390 Pfam UBX domain 308 384 IPR001012 GO:0005515
Acco04g2556 390 MobiDBLite consensus disorder prediction 249 290 - -
Acco04g2556 390 SUPERFAMILY Ubiquitin-like 303 386 IPR029071 -
Acco04g2556 390 CDD UAS 98 208 - -
Acco04g2556 390 Gene3D - 309 387 - -
Acco04g2556 390 SMART ubx_3 300 385 IPR001012 GO:0005515
Acco04g2556 390 SUPERFAMILY Thioredoxin-like 73 211 IPR036249 -
Acco04g2556 390 SMART 45neu3 77 203 IPR006577 -
Acco04g2556 390 MobiDBLite consensus disorder prediction 33 57 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco04g2556 Acco-ChrAcco04 42462912 42464768 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco04g2556 04 42462912 42464768 Acco04g2556 04 42462912 42464768 ECH